iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cfa-020577

Ensembl Protein ID

ENSCAFP00000025166.3

UniProt Accession

F1PTL1; F1PTL1_CANLF

Genbank Protein ID

ENSCAFP00000025166

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAEX03012401

Gene Name

RAD23A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCAFG00000017085.3	ENSCAFT00000027066.3	ENSCAFP00000025166.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	7.90e-21	73.8	162	201
ULD/UDP/UBQ/UBQ_PIM	3.30e-26	91.3	3	80

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 2    ededkleqlveMGFdreealqaLraannnleaAveyLldg 41
           e+e +l ++++MG++re+++ aLra++nn+ +AveyLl+g
   Q: 162  EYETMLTEIMSMGYERERVVAALRASYNNPHRAVEYLLTG 201
           7899**********************************97 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           +++t+ktl++++f++++++d+tv+ lKeki++e+g   +p++ qkLIyaGkiL+Dd +++++ i+++++v+++v+k+k
   Q: 3    VTITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGrdaFPVAGQKLIYAGKILSDDVPIRDYRIDEKNFVVVMVTKAK 80
           68*************************************************************************987 PP

Organism

Canis familiaris

Protein Sequence
(Fasta)

MAVTITLKTL QQQTFKIRME PDETVKVLKE KIEAEKGRDA FPVAGQKLIY AGKILSDDVP 60
IRDYRIDEKN FVVVMVTKAK TSPGTSVPPE ASPTAAPESS TSFPPAPASG MSHPPPTARE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGACGTTGG AGCCATTTCG TGGCCGTCTG ACGTCACCGC TAGCGGGCAT GGCGTCACTC 60
TCAGGGAGCC ACGTGACGTA TATGCGTGCT GAATGAGAAG CTGCCTCCGG AAGCCGAGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005829--C:cytosol
GO:0005815--C:microtubule organizing center
GO:0005654--C:nucleoplasm
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0045070--P:positive regulation of viral genome replication
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0032434--P:regulation of proteasomal ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001515	Ailuropoda melanoleuca	95.26	8.00e-147	513.00
IUUC-Aca-004704	Anolis carolinensis	78.15	2.00e-110	392.00
IUUC-Ago-007830	Ashbya gossypii	25.96	4.00e-19	89.00
IUUC-Acl-008212	Aspergillus clavatus	35.80	4.00e-25	108.00
IUUC-Afu-008877	Aspergillus fumigatus	35.60	4.00e-25	108.00
IUUC-Ani-009460	Aspergillus nidulans	38.00	4.00e-29	122.00
IUUC-Bta-012377	Bos taurus	97.79	5.00e-153	533.00
IUUC-Cel-018364	Caenorhabditis elegans	30.52	9.00e-27	114.00
IUUC-Cja-018946	Callithrix jacchus	95.87	4.00e-143	500.00
IUUC-Cpo-021850	Cavia porcellus	91.71	5.00e-165	573.00
IUUC-Csa-023183	Chlorocebus sabaeus	96.97	5.00e-151	526.00
IUUC-Cgl-026495	Colletotrichum gloeosporioides	32.02	3.00e-21	95.90
IUUC-Dno-030017	Dasypus novemcinctus	92.63	1.00e-131	462.00
IUUC-Dor-030358	Dipodomys ordii	83.52	2.00e-123	435.00
IUUC-Eca-033599	Equus caballus	94.40	3.00e-136	477.00
IUUC-Fca-036051	Felis catus	99.17	2.00e-158	551.00
IUUC-Gmo-038528	Gadus morhua	56.91	5.00e-86	311.00
IUUC-Gga-040133	Gallus gallus	87.38	5.00e-75	274.00
IUUC-Ggo-045084	Gorilla gorilla	97.25	5.00e-151	526.00
IUUC-Hsa-046614	Homo sapiens	97.25	7.00e-152	529.00
IUUC-Itr-047875	Ictidomys tridecemlineatus	96.42	5.00e-171	593.00
IUUC-Lch-050563	Latimeria chalumnae	63.66	7.00e-106	377.00
IUUC-Lpe-051168	Leersia perrieri	40.09	7.00e-35	140.00
IUUC-Laf-054589	Loxodonta africana	97.25	3.00e-146	511.00
IUUC-Mcc-055860	Macaca mulatta	96.97	5.00e-151	526.00
IUUC-Meu-056459	Macropus eugenii	93.95	9.00e-104	370.00
IUUC-Mmr-060819	Microcebus murinus	96.69	3.00e-167	580.00
IUUC-Mdo-062742	Monodelphis domestica	85.51	3.00e-144	504.00
IUUC-Mmu-063929	Mus musculus	93.94	1.00e-160	558.00
IUUC-Mpu-066684	Mustela putorius furo	99.45	4.00e-160	557.00
IUUC-Mlu-067787	Myotis lucifugus	96.42	1.00e-152	532.00
IUUC-Nfi-068390	Neosartorya fischeri	35.60	5.00e-25	108.00
IUUC-Nle-069846	Nomascus leucogenys	86.07	4.00e-132	464.00
IUUC-Oan-073572	Ornithorhynchus anatinus	80.39	3.00e-132	464.00
IUUC-Ocu-074968	Oryctolagus cuniculus	94.40	1.00e-104	374.00
IUUC-Obr-076909	Oryza brachyantha	34.44	5.00e-43	168.00
IUUC-Oga-089075	Otolemur garnettii	96.41	1.00e-148	518.00
IUUC-Oar-090387	Ovis aries	96.97	6.00e-147	513.00
IUUC-Ptr-090912	Pan troglodytes	93.66	6.00e-141	493.00
IUUC-Pan-092140	Papio anubis	96.97	2.00e-150	525.00
IUUC-Psi-093347	Pelodiscus sinensis	86.39	1.00e-61	229.00
IUUC-Pno-095064	Phaeosphaeria nodorum	36.32	2.00e-17	83.60
IUUC-Pfo-096607	Poecilia formosa	64.04	6.00e-96	343.00
IUUC-Pab-097738	Pongo abelii	93.39	1.00e-144	505.00
IUUC-Pop-099642	Populus trichocarpa	35.00	2.00e-49	189.00
IUUC-Pca-100348	Procavia capensis	93.96	2.00e-142	498.00
IUUC-Ppe-101522	Prunus persica	35.24	9.00e-51	194.00
IUUC-Pva-102412	Pteropus vampyrus	98.62	2.00e-157	548.00
IUUC-Pgr-103618	Puccinia graminis	36.92	4.00e-25	108.00
IUUC-Rno-105569	Rattus norvegicus	94.20	1.00e-149	522.00
IUUC-Sha-106918	Sarcophilus harrisii	85.96	9.00e-132	462.00
IUUC-Sja-107851	Schizosaccharomyces japonicus	40.00	6.00e-34	138.00
IUUC-Smo-109129	Selaginella moellendorffii	39.20	4.00e-34	139.00
IUUC-Sit-109813	Setaria italica	35.42	2.00e-46	179.00
IUUC-Stu-112027	Solanum tuberosum	36.43	5.00e-53	201.00
IUUC-Sbi-114459	Sorghum bicolor	31.51	5.00e-45	174.00
IUUC-Ssc-115460	Sus scrofa	98.07	5.00e-155	540.00
IUUC-Tsy-119385	Tarsius syrichta	80.15	1.00e-68	252.00
IUUC-Tni-120493	Tetraodon nigroviridis	69.23	4.00e-71	261.00
IUUC-Tca-121594	Theobroma cacao	36.80	3.00e-51	195.00
IUUC-Tre-121911	Trichoderma reesei	41.70	1.00e-26	114.00
IUUC-Tbe-127603	Tupaia belangeri	84.67	5.00e-55	208.00
IUUC-Ttr-129232	Tursiops truncatus	87.60	7.00e-145	506.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence