iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cja-019921

Ensembl Protein ID

ENSCJAP00000027888.2

UniProt Accession

F7FRK9; F7FRK9_CALJA

Genbank Protein ID

ENSCJAP00000027888

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACFV01015980

Gene Name

RYBP

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000015125.3	ENSCJAT00000029468.2	ENSCJAP00000027888.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/ZnF/NZF	6.40e-14	52.1	11	40

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/ZnF/NZF

   S: 1    aeaqWaCsaCTflNePeavkCemCsrpRgc 30
           +e++W+Cs+CTf+N++ea+kC++C+ ++g+
   Q: 11   DEGFWDCSVCTFRNSAEAFKCSICDVRKGT 40
           589*************************95 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

RPKRQAKPAA DEGFWDCSVC TFRNSAEAFK CSICDVRKGT STRKPRINSQ LVAQQVAQQY 60
ATPPPPKKEK KEKVEKQDKE KPEKDKEISP SVTKKNTNKK TKPKSDILKD PPSEANSIQS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGCCAAAAA GACAAGCGAA ACCTGCCGCA GACGAAGGCT TTTGGGATTG TAGCGTCTGC 60
ACCTTCAGAA ACAGTGCCGA AGCCTTTAAA TGCAGCATCT GCGATGTGAG GAAAGGCACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome

Interpro

IPR033774--YAF2_RYBP
IPR001876--Znf_RanBP2

PROSITE

PS01358--ZF_RANBP2_1
PS50199--ZF_RANBP2_2

Pfam

PF17219--YAF2_RYBP
PF00641--zf-RanBP

SMART

SM00547--ZnF_RBZ

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0031519--C:PcG protein complex
GO:0003677--F:DNA binding
GO:0003714--F:transcription corepressor activity
GO:0008270--F:zinc ion binding
GO:0035518--P:histone H2A monoubiquitination
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002182	Ailuropoda melanoleuca	100.00	7.00e-64	237.00
IUUC-Apl-003475	Anas platyrhynchos	96.79	1.00e-61	229.00
IUUC-Aca-004725	Anolis carolinensis	94.04	2.00e-60	225.00
IUUC-Ame-011035	Astyanax mexicanus	87.76	4.00e-23	102.00
IUUC-Bta-012724	Bos taurus	99.24	2.00e-36	145.00
IUUC-Cfa-020363	Canis familiaris	100.00	1.00e-62	232.00
IUUC-Cpo-022408	Cavia porcellus	100.00	5.00e-37	147.00
IUUC-Csa-023628	Chlorocebus sabaeus	100.00	2.00e-64	238.00
IUUC-Cho-024871	Choloepus hoffmanni	100.00	5.00e-40	155.00
IUUC-Cin-025723	Ciona intestinalis	77.50	3.00e-16	77.80
IUUC-Dre-028374	Danio rerio	93.88	8.00e-25	107.00
IUUC-Dno-029292	Dasypus novemcinctus	100.00	4.00e-37	147.00
IUUC-Dor-030691	Dipodomys ordii	100.00	4.00e-37	147.00
IUUC-Ete-032320	Echinops telfairi	98.17	7.00e-63	233.00
IUUC-Eca-034330	Equus caballus	100.00	3.00e-64	238.00
IUUC-Eeu-035193	Erinaceus europaeus	84.40	3.00e-44	171.00
IUUC-Fca-035645	Felis catus	100.00	4.00e-37	147.00
IUUC-Fal-036647	Ficedula albicollis	96.73	5.00e-59	220.00
IUUC-Gga-040262	Gallus gallus	96.79	6.00e-62	230.00
IUUC-Ggo-045026	Gorilla gorilla	100.00	5.00e-37	147.00
IUUC-Hsa-046566	Homo sapiens	100.00	3.00e-64	238.00
IUUC-Itr-048728	Ictidomys tridecemlineatus	97.71	3.00e-35	140.00
IUUC-Lch-050014	Latimeria chalumnae	83.19	1.00e-26	112.00
IUUC-Loc-051746	Lepisosteus oculatus	72.18	1.00e-63	236.00
IUUC-Laf-054352	Loxodonta africana	99.54	9.00e-63	232.00
IUUC-Mcc-055623	Macaca mulatta	100.00	2.00e-63	235.00
IUUC-Mor-057038	Magnaporthe oryzae	50.00	1.80e-01	30.80
IUUC-Mga-059812	Meleagris gallopavo	96.18	2.00e-34	138.00
IUUC-Mmr-061669	Microcebus murinus	97.71	1.00e-41	162.00
IUUC-Mdo-061964	Monodelphis domestica	97.25	2.00e-62	232.00
IUUC-Mmu-063177	Mus musculus	99.08	2.00e-64	238.00
IUUC-Mac-065491	Musa acuminata	42.86	1.00e-03	36.20
IUUC-Mpu-065711	Mustela putorius furo	100.00	2.00e-64	238.00
IUUC-Mlu-067973	Myotis lucifugus	97.59	2.00e-17	80.90
IUUC-Nle-069817	Nomascus leucogenys	100.00	4.00e-64	237.00
IUUC-Opr-070623	Ochotona princeps	100.00	4.00e-37	147.00
IUUC-Ont-071994	Oreochromis niloticus	62.45	6.00e-44	170.00
IUUC-Oan-072949	Ornithorhynchus anatinus	97.25	7.00e-63	233.00
IUUC-Ocu-074013	Oryctolagus cuniculus	99.53	2.00e-61	228.00
IUUC-Oar-090312	Ovis aries	99.24	2.00e-36	145.00
IUUC-Ptr-091316	Pan troglodytes	100.00	4.00e-62	231.00
IUUC-Pan-091877	Papio anubis	100.00	2.00e-64	238.00
IUUC-Psi-093195	Pelodiscus sinensis	96.31	2.00e-60	224.00
IUUC-Pfo-096909	Poecilia formosa	61.30	1.00e-44	172.00
IUUC-Pab-098578	Pongo abelii	100.00	1.00e-62	232.00
IUUC-Pca-100706	Procavia capensis	96.39	1.00e-42	165.00
IUUC-Pva-102682	Pteropus vampyrus	99.08	2.00e-61	228.00
IUUC-Rno-105156	Rattus norvegicus	99.08	4.00e-64	237.00
IUUC-Sha-107156	Sarcophilus harrisii	97.71	4.00e-35	140.00
IUUC-Sar-113234	Sorex araneus	93.95	1.00e-57	215.00
IUUC-Ssc-116262	Sus scrofa	100.00	5.00e-37	147.00
IUUC-Tgu-116730	Taeniopygia guttata	96.79	7.00e-62	229.00
IUUC-Tsy-119328	Tarsius syrichta	100.00	4.00e-37	147.00
IUUC-Tni-120066	Tetraodon nigroviridis	58.40	9.00e-46	176.00
IUUC-Tre-121881	Trichoderma reesei	38.71	2.40e-02	33.50
IUUC-Tvi-122470	Trichoderma virens	44.83	3.00e-03	36.20
IUUC-Tbe-127332	Tupaia belangeri	99.54	8.00e-64	236.00
IUUC-Ttr-128963	Tursiops truncatus	100.00	3.00e-64	238.00
IUUC-Vpa-130270	Vicugna pacos	99.22	8.00e-36	142.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence