iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mpu-066389

Ensembl Protein ID

ENSMPUP00000007168.1

UniProt Accession

M3Y763; M3Y763_MUSPF

Genbank Protein ID

ENSMPUP00000007168

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEYP01022727

Gene Name

RAD23B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMPUG00000007226.1	ENSMPUT00000007287.1	ENSMPUP00000007168.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.90e-19	69.2	183	220
ULD/UDP/UBQ/UBQ_PIM	4.20e-18	65.1	16	72

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           +e ++ ++++MG++re+++ aLra++nn+++AveyLl 
   Q: 183  YENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYLLM 220
           5789********************************95 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 22   tveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           +v++lKeki++e+g   +p++ qkLIyaGkiL+Ddt L+e++i+++++v+++v+k+k
   Q: 16   KVKALKEKIESEKGkdaFPVAGQKLIYAGKILNDDTALKEYKIDEKNFVVVMVTKPK 72
           69****************************************************997 PP

Organism

Mustela putorius furo

Protein Sequence
(Fasta)

MSFKKRYQVP SAAAGKVKAL KEKIESEKGK DAFPVAGQKL IYAGKILNDD TALKEYKIDE 60
KNFVVVMVTK PKAVTPAPAT TQQSSPATTT TVSSSTAPAV AQAPTPAPAL APTPSPASIT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

NNNGGCGCGG CGGTTCTGTG CGCCCGGCGG GGGCCTCAAC CCGGAGCGGG GCCCTCAACC 60
CGGAGCGGGG CCCCGCAGCG CAGCCGAGCG GGGAAAGCCC TCTCAGCAGA CCCGGGAGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0071942--C:XPC complex
GO:0003684--F:damaged DNA binding
GO:0000715--P:nucleotide-excision repair, DNA damage recognition
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0032434--P:regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0007283--P:spermatogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000770	Aegilops tauschii	34.94	5.00e-31	129.00
IUUC-Aml-001195	Ailuropoda melanoleuca	98.80	5.00e-96	344.00
IUUC-Apl-003371	Anas platyrhynchos	72.50	2.00e-114	405.00
IUUC-Aca-004599	Anolis carolinensis	80.28	4.00e-87	315.00
IUUC-Aly-005498	Arabidopsis lyrata	40.89	5.00e-39	155.00
IUUC-Ath-006674	Arabidopsis thaliana	39.11	1.00e-37	150.00
IUUC-Acl-008212	Aspergillus clavatus	46.27	6.00e-19	88.60
IUUC-Afl-008605	Aspergillus flavus	44.70	9.00e-19	87.80
IUUC-Afu-008877	Aspergillus fumigatus	45.52	1.00e-18	87.00
IUUC-Aor-010032	Aspergillus oryzae	44.70	2.00e-18	87.00
IUUC-Ate-010458	Aspergillus terreus	39.11	3.00e-28	119.00
IUUC-Bta-012922	Bos taurus	96.58	2.00e-92	332.00
IUUC-Cja-018772	Callithrix jacchus	94.70	2.00e-95	342.00
IUUC-Cfa-020683	Canis familiaris	85.45	2.00e-125	442.00
IUUC-Cpo-022145	Cavia porcellus	85.53	4.00e-113	401.00
IUUC-Cre-022810	Chlamydomonas reinhardtii	37.50	9.00e-30	124.00
IUUC-Csa-023714	Chlorocebus sabaeus	90.96	1.00e-132	466.00
IUUC-Cho-024814	Choloepus hoffmanni	72.63	7.00e-82	297.00
IUUC-Cin-025741	Ciona intestinalis	40.18	9.00e-33	134.00
IUUC-Dre-028369	Danio rerio	69.96	2.00e-82	298.00
IUUC-Dno-029543	Dasypus novemcinctus	95.08	6.00e-96	344.00
IUUC-Dse-031336	Dothistroma septosporum	49.61	3.00e-17	82.80
IUUC-Ete-032583	Echinops telfairi	80.43	3.00e-63	235.00
IUUC-Eca-034243	Equus caballus	97.01	3.00e-92	332.00
IUUC-Eeu-034721	Erinaceus europaeus	89.40	5.00e-72	264.00
IUUC-Fca-035679	Felis catus	98.86	2.00e-99	355.00
IUUC-Fal-037148	Ficedula albicollis	81.71	2.00e-87	315.00
IUUC-Ggr-040116	Gaeumannomyces graminis	44.78	6.00e-16	78.20
IUUC-Gga-040544	Gallus gallus	71.58	2.00e-118	418.00
IUUC-Gma-043835	Glycine max	36.23	2.00e-38	153.00
IUUC-Ggo-045125	Gorilla gorilla	95.60	5.00e-99	354.00
IUUC-Hsa-046519	Homo sapiens	95.60	5.00e-99	354.00
IUUC-Hvu-047832	Hordeum vulgare	36.95	2.00e-32	133.00
IUUC-Itr-048295	Ictidomys tridecemlineatus	90.60	2.00e-86	312.00
IUUC-Kpa-049314	Komagataella pastoris	37.34	2.00e-29	122.00
IUUC-Lch-050553	Latimeria chalumnae	72.83	2.00e-71	262.00
IUUC-Lpe-051087	Leersia perrieri	35.83	1.00e-33	137.00
IUUC-Loc-051748	Lepisosteus oculatus	68.15	8.00e-75	273.00
IUUC-Laf-054293	Loxodonta africana	93.61	5.00e-95	340.00
IUUC-Mcc-055600	Macaca mulatta	95.83	2.00e-106	378.00
IUUC-Meu-056082	Macropus eugenii	64.00	9.00e-68	250.00
IUUC-Mor-057287	Magnaporthe oryzae	46.77	3.00e-14	72.80
IUUC-Mpo-057609	Magnaporthe poae	44.96	4.00e-15	75.10
IUUC-Mtr-058148	Medicago truncatula	36.68	4.00e-39	155.00
IUUC-Mla-058961	Melampsora laricipopulina	47.37	2.00e-25	110.00
IUUC-Mga-060060	Meleagris gallopavo	44.69	7.00e-27	114.00
IUUC-Mvi-060220	Microbotryum violaceum	44.36	2.00e-21	97.10
IUUC-Mmr-061159	Microcebus murinus	92.98	2.00e-92	332.00
IUUC-Mdo-061967	Monodelphis domestica	82.25	1.00e-84	306.00
IUUC-Mmu-063258	Mus musculus	89.01	5.00e-104	370.00
IUUC-Mlu-067999	Myotis lucifugus	92.45	2.00e-94	339.00
IUUC-Nfi-068390	Neosartorya fischeri	45.52	1.00e-18	87.00
IUUC-Ncr-068685	Neurospora crassa	44.78	2.00e-24	106.00
IUUC-Nle-069655	Nomascus leucogenys	95.83	3.00e-107	381.00
IUUC-Opr-070234	Ochotona princeps	98.21	1.00e-26	113.00
IUUC-Ocu-074831	Oryctolagus cuniculus	90.94	4.00e-91	328.00
IUUC-Opu-083963	Oryza punctata	36.55	9.00e-35	140.00
IUUC-Oru-084942	Oryza rufipogon	31.36	3.00e-39	155.00
IUUC-Ola-086540	Oryzias latipes	64.78	2.00e-64	239.00
IUUC-Olu-087843	Ostreococcus lucimarinus	40.61	8.00e-37	147.00
IUUC-Oga-088023	Otolemur garnettii	89.93	4.00e-94	338.00
IUUC-Oar-089964	Ovis aries	97.01	1.00e-91	329.00
IUUC-Ptr-091165	Pan troglodytes	95.60	8.00e-99	353.00
IUUC-Pan-092009	Papio anubis	94.38	5.00e-105	374.00
IUUC-Psi-093477	Pelodiscus sinensis	81.92	2.00e-87	315.00
IUUC-Ppa-095654	Physcomitrella patens	38.87	2.00e-35	142.00
IUUC-Pfo-097385	Poecilia formosa	61.96	8.00e-70	257.00
IUUC-Pab-097868	Pongo abelii	95.60	2.00e-98	352.00
IUUC-Pca-100652	Procavia capensis	92.00	6.00e-66	244.00
IUUC-Pva-102137	Pteropus vampyrus	97.11	2.00e-97	348.00
IUUC-Ptt-103717	Puccinia triticina	45.86	2.00e-24	106.00
IUUC-Pte-104303	Pyrenophora teres	50.00	2.00e-19	89.70
IUUC-Pyt-104580	Pyrenophora triticirepentis	49.64	3.00e-19	89.40
IUUC-Rno-104844	Rattus norvegicus	89.71	3.00e-104	372.00
IUUC-Sce-106214	Saccharomyces cerevisiae	62.50	1.00e-12	67.40
IUUC-Sha-107073	Sarcophilus harrisii	86.02	5.00e-85	308.00
IUUC-Spo-108298	Schizosaccharomyces pombe	41.32	9.00e-37	147.00
IUUC-Ssl-108382	Sclerotinia sclerotiorum	43.75	8.00e-17	81.30
IUUC-Sar-112925	Sorex araneus	87.88	2.00e-90	325.00
IUUC-Ssc-116329	Sus scrofa	96.58	2.00e-98	352.00
IUUC-Tgu-116918	Taeniopygia guttata	80.95	8.00e-89	320.00
IUUC-Tru-118651	Takifugu rubripes	60.00	9.00e-71	260.00
IUUC-Tsy-118836	Tarsius syrichta	98.53	1.00e-48	187.00
IUUC-Tvi-122617	Trichoderma virens	44.96	5.00e-16	78.60
IUUC-Tbe-127493	Tupaia belangeri	79.26	8.00e-66	244.00
IUUC-Ttr-128464	Tursiops truncatus	96.20	2.00e-98	352.00
IUUC-Uma-129484	Ustilago maydis	53.06	3.00e-11	63.20
IUUC-Vda-129946	Verticillium dahliae	45.52	2.00e-17	83.20
IUUC-Vpa-130357	Vicugna pacos	95.13	1.00e-65	243.00
IUUC-Vvi-130842	Vitis vinifera	35.83	5.00e-37	148.00
IUUC-Xtr-132679	Xenopus tropicalis	77.34	2.00e-68	252.00
IUUC-Yli-134615	Yarrowia lipolytica	43.26	3.00e-37	148.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence