iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tgu-117409

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABQF01026543

Gene Name

RNFT1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTGUG00000007693.1	ENSTGUT00000008011.1	ENSTGUP00000007926.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.90e-08	33.2	263	301

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+ +f++ p++l C+H+f+++C+  w       ++e +CPlCr
   Q: 263  CSICQAEFQK-PILLICQHIFCEECISLW------FNREKTCPLCR 301
           **********.999***************......**********8 PP

Organism

Taeniopygia guttata

Protein Sequence
(Fasta)

SRSHGHGHGE AGGPEDAAAE PEEQGGSSLS ELRYLLQWLH KSLPYLLILG VKLLTQHITG 60
ISLGIGLLTT YAYANKSIVN QVFLRERCSK LQCTWLLLYL SGSSLLLYYT FHSQSLYHSL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGCCGCTCCC ACGGGCACGG CCATGGGGAG GCAGGAGGGC CCGAGGACGC GGCTGCGGAG 60
CCGGAGGAGC AGGGCGGGAG CTCCCTGTCA GAGCTGCGGT ACCTCCTGCA GTGGCTGCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000709	Aegilops tauschii	32.16	3.00e-25	108.00
IUUC-Aml-001586	Ailuropoda melanoleuca	79.68	6.00e-133	466.00
IUUC-Apl-003875	Anas platyrhynchos	86.07	4.00e-129	454.00
IUUC-Aca-004325	Anolis carolinensis	75.50	2.00e-104	372.00
IUUC-Aly-005949	Arabidopsis lyrata	29.19	7.00e-31	127.00
IUUC-Ath-007582	Arabidopsis thaliana	28.86	3.00e-32	132.00
IUUC-Ame-010748	Astyanax mexicanus	53.87	4.00e-87	314.00
IUUC-Bta-013167	Bos taurus	80.97	5.00e-135	473.00
IUUC-Bdi-014696	Brachypodium distachyon	27.85	2.00e-29	122.00
IUUC-Bol-015956	Brassica oleracea	28.62	3.00e-29	122.00
IUUC-Bra-016928	Brassica rapa	29.19	3.00e-31	129.00
IUUC-Cel-018190	Caenorhabditis elegans	24.64	3.00e-16	79.30
IUUC-Cja-019669	Callithrix jacchus	80.65	4.00e-134	470.00
IUUC-Cfa-020610	Canis familiaris	80.32	2.00e-134	471.00
IUUC-Cpo-021979	Cavia porcellus	80.32	2.00e-119	421.00
IUUC-Cre-022592	Chlamydomonas reinhardtii	43.55	9.00e-12	63.90
IUUC-Csa-023752	Chlorocebus sabaeus	80.32	1.00e-134	472.00
IUUC-Cho-024880	Choloepus hoffmanni	72.26	6.00e-109	387.00
IUUC-Dre-028522	Danio rerio	58.56	2.00e-88	318.00
IUUC-Dno-029312	Dasypus novemcinctus	79.68	3.00e-133	467.00
IUUC-Dor-030524	Dipodomys ordii	69.55	5.00e-88	317.00
IUUC-Dme-031681	Drosophila melanogaster	31.22	9.00e-26	111.00
IUUC-Ete-032456	Echinops telfairi	70.10	2.00e-116	411.00
IUUC-Eca-033852	Equus caballus	45.57	5.00e-74	271.00
IUUC-Eeu-034649	Erinaceus europaeus	71.70	6.00e-30	124.00
IUUC-Fca-036321	Felis catus	75.16	1.00e-122	432.00
IUUC-Fal-036873	Ficedula albicollis	95.05	3.00e-147	514.00
IUUC-Gmo-038501	Gadus morhua	55.77	5.00e-81	294.00
IUUC-Gga-040583	Gallus gallus	85.81	1.00e-134	472.00
IUUC-Gac-042530	Gasterosteus aculeatus	56.13	4.00e-85	307.00
IUUC-Gma-043370	Glycine max	26.95	9.00e-29	120.00
IUUC-Ggo-045577	Gorilla gorilla	76.53	2.00e-126	445.00
IUUC-Hsa-046395	Homo sapiens	80.26	3.00e-133	467.00
IUUC-Hvu-047080	Hordeum vulgare	31.19	8.00e-28	116.00
IUUC-Itr-048888	Ictidomys tridecemlineatus	80.32	1.00e-133	469.00
IUUC-Lch-049516	Latimeria chalumnae	70.65	2.00e-112	399.00
IUUC-Lpe-051163	Leersia perrieri	29.19	1.00e-31	130.00
IUUC-Loc-052692	Lepisosteus oculatus	60.96	6.00e-94	337.00
IUUC-Laf-054478	Loxodonta africana	80.32	2.00e-134	471.00
IUUC-Mcc-055064	Macaca mulatta	78.65	2.00e-107	381.00
IUUC-Meu-056056	Macropus eugenii	71.34	4.00e-110	390.00
IUUC-Mtr-057979	Medicago truncatula	28.08	1.00e-31	130.00
IUUC-Mga-059908	Meleagris gallopavo	88.14	2.00e-113	401.00
IUUC-Mmr-061235	Microcebus murinus	45.93	3.00e-75	275.00
IUUC-Mdo-063071	Monodelphis domestica	80.39	6.00e-131	460.00
IUUC-Mmu-063446	Mus musculus	77.74	7.00e-124	436.00
IUUC-Mac-065493	Musa acuminata	28.86	1.00e-32	134.00
IUUC-Mpu-065810	Mustela putorius furo	77.89	2.00e-111	395.00
IUUC-Mlu-067707	Myotis lucifugus	46.28	1.00e-75	276.00
IUUC-Nle-069009	Nomascus leucogenys	78.06	6.00e-130	456.00
IUUC-Ont-071863	Oreochromis niloticus	55.91	1.00e-83	303.00
IUUC-Oan-073490	Ornithorhynchus anatinus	77.71	2.00e-134	471.00
IUUC-Ocu-074346	Oryctolagus cuniculus	81.94	3.00e-131	460.00
IUUC-Oba-075245	Oryza barthii	32.11	2.00e-28	118.00
IUUC-Obr-076737	Oryza brachyantha	31.73	2.00e-22	98.60
IUUC-Ogl-077684	Oryza glaberrima	28.19	5.00e-31	128.00
IUUC-Ogu-078859	Oryza glumaepatula	28.19	5.00e-31	128.00
IUUC-Oin-079424	Oryza indica	27.85	1.00e-30	126.00
IUUC-Ome-081614	Oryza meridionalis	27.52	9.00e-25	107.00
IUUC-Oni-082296	Oryza nivara	27.52	8.00e-25	107.00
IUUC-Opu-083546	Oryza punctata	27.52	8.00e-25	107.00
IUUC-Oru-085138	Oryza rufipogon	28.32	3.00e-28	119.00
IUUC-Osa-085729	Oryza sativa	28.19	6.00e-31	127.00
IUUC-Ola-086809	Oryzias latipes	54.79	4.00e-79	288.00
IUUC-Olu-087799	Ostreococcus lucimarinus	37.65	1.00e-11	62.40
IUUC-Oga-087950	Otolemur garnettii	80.65	2.00e-128	451.00
IUUC-Oar-089816	Ovis aries	81.29	9.00e-136	476.00
IUUC-Ptr-090736	Pan troglodytes	80.26	4.00e-133	467.00
IUUC-Pan-092883	Papio anubis	46.56	1.00e-75	276.00
IUUC-Psi-093766	Pelodiscus sinensis	82.90	3.00e-131	460.00
IUUC-Ppa-095990	Physcomitrella patens	27.62	7.00e-29	120.00
IUUC-Pfo-097090	Poecilia formosa	56.57	3.00e-77	281.00
IUUC-Pab-098474	Pongo abelii	80.97	7.00e-135	473.00
IUUC-Pop-099270	Populus trichocarpa	33.03	2.00e-30	125.00
IUUC-Pca-100148	Procavia capensis	45.31	1.00e-74	273.00
IUUC-Ppe-101974	Prunus persica	32.11	2.00e-28	119.00
IUUC-Pva-102165	Pteropus vampyrus	45.81	2.00e-76	279.00
IUUC-Rno-105126	Rattus norvegicus	77.74	2.00e-124	438.00
IUUC-Sha-107537	Sarcophilus harrisii	79.42	1.00e-131	462.00
IUUC-Smo-109529	Selaginella moellendorffii	28.76	5.00e-31	128.00
IUUC-Sit-110120	Setaria italica	28.19	3.00e-29	122.00
IUUC-Sly-111923	Solanum lycopersicum	27.18	1.00e-30	127.00
IUUC-Stu-112700	Solanum tuberosum	32.57	1.00e-25	110.00
IUUC-Sar-113494	Sorex araneus	88.61	6.00e-40	157.00
IUUC-Sbi-114889	Sorghum bicolor	27.85	4.00e-24	105.00
IUUC-Ssc-116039	Sus scrofa	76.72	2.00e-88	318.00
IUUC-Tru-117926	Takifugu rubripes	56.85	1.00e-80	292.00
IUUC-Tsy-118995	Tarsius syrichta	79.68	5.00e-127	447.00
IUUC-Tni-120361	Tetraodon nigroviridis	56.31	4.00e-87	314.00
IUUC-Tca-121155	Theobroma cacao	33.33	2.00e-30	126.00
IUUC-Tae-123635	Triticum aestivum	28.19	3.00e-32	132.00
IUUC-Tur-126177	Triticum urartu	32.11	1.00e-28	119.00
IUUC-Tbe-128158	Tupaia belangeri	56.45	9.00e-73	266.00
IUUC-Ttr-128496	Tursiops truncatus	77.10	1.00e-128	452.00
IUUC-Vpa-130045	Vicugna pacos	61.34	2.00e-69	255.00
IUUC-Vvi-131323	Vitis vinifera	32.57	1.00e-28	120.00
IUUC-Xtr-132923	Xenopus tropicalis	62.54	3.00e-102	364.00
IUUC-Xma-134146	Xiphophorus maculatus	57.58	7.00e-82	296.00
IUUC-Zma-135198	Zea mays	28.19	2.00e-30	126.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence