iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017690

Ensembl Protein ID

Bra005541.1-P

UniProt Accession

M4CMV3; M4CMV3_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra005541	Bra005541.1	Bra005541.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.60e-28	96.8	541	578
E3 activity/RING/U-box	6.70e-09	36.7	49	116

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvllk 37
           gH+  v+ ++f s++ l+s+s D t+++WD++++ +++
   Q: 541  GHKKAVSYVKFlSNNELASASTDSTLRLWDVKDNLPVR 578
           8999*******9889****************9998876 PP

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           +++lCpI +++ +d   +++G+++   +I  +l+++   cP ++q+lt+++l Pn  l +l ++  +++
   Q: 49   KDLLCPICMQVIKDAFLTACGHSFCYMCIITHLRNKSD-CPCCSQHLTNNQLYPNFLLDKLLKKTSARH 116
           6799*******************************999.****************99988888777666 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MEEIRKDPLV PAVKPDPRAS SIGEGPNHRH ENDEGGSGGL EIGAPDLDKD LLCPICMQVI 60
KDAFLTACGH SFCYMCIITH LRNKSDCPCC SQHLTNNQLY PNFLLDKLLK KTSARHVSKT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAGAGA TTAGGAAGGA TCCGCTAGTT CCGGCTGTGA AACCCGATCC GAGAGCCTCC 60
TCCATCGGAG AAGGCCCCAA CCACCGCCAC GAAAACGACG AAGGAGGAAG CGGTGGTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00400--WD40

SMART

SM00184--RING
SM00320--WD40

Gene Ontology

GO:0016604--C:nuclear body
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0046283--P:anthocyanin-containing compound metabolic process
GO:0006281--P:DNA repair
GO:0009649--P:entrainment of circadian clock
GO:0009640--P:photomorphogenesis
GO:0048573--P:photoperiodism, flowering
GO:0010119--P:regulation of stomatal movement
GO:0009641--P:shade avoidance

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000885	Aegilops tauschii	69.61	0.00e+00	912.00
IUUC-Aml-001265	Ailuropoda melanoleuca	39.33	4.00e-120	424.00
IUUC-Atr-002460	Amborella trichopoda	73.07	0.00e+00	955.00
IUUC-Apl-003796	Anas platyrhynchos	39.13	2.00e-112	399.00
IUUC-Aca-005078	Anolis carolinensis	39.27	1.00e-117	417.00
IUUC-Aly-006014	Arabidopsis lyrata	92.32	0.00e+00	1263.00
IUUC-Ath-007636	Arabidopsis thaliana	93.21	0.00e+00	1311.00
IUUC-Ame-011176	Astyanax mexicanus	58.56	2.00e-36	147.00
IUUC-Bta-012595	Bos taurus	39.39	6.00e-121	427.00
IUUC-Bdi-014152	Brachypodium distachyon	70.41	0.00e+00	925.00
IUUC-Bol-016380	Brassica oleracea	97.19	0.00e+00	1332.00
IUUC-Cja-018926	Callithrix jacchus	39.39	1.00e-120	426.00
IUUC-Cfa-021088	Canis familiaris	39.91	5.00e-120	424.00
IUUC-Cpo-022442	Cavia porcellus	38.71	6.00e-114	404.00
IUUC-Csa-024119	Chlorocebus sabaeus	39.30	3.00e-120	425.00
IUUC-Cin-025375	Ciona intestinalis	38.89	6.00e-117	414.00
IUUC-Cme-027350	Cyanidioschyzon merolae	43.80	1.00e-89	324.00
IUUC-Dre-028453	Danio rerio	45.85	2.00e-101	363.00
IUUC-Dno-029887	Dasypus novemcinctus	39.24	2.00e-120	426.00
IUUC-Dor-031110	Dipodomys ordii	50.33	6.00e-87	314.00
IUUC-Ete-033016	Echinops telfairi	50.33	7.00e-87	315.00
IUUC-Eca-034403	Equus caballus	38.65	6.00e-112	397.00
IUUC-Eeu-034690	Erinaceus europaeus	50.35	1.00e-81	296.00
IUUC-Fca-036475	Felis catus	39.13	2.00e-113	402.00
IUUC-Fal-037189	Ficedula albicollis	39.63	1.00e-118	420.00
IUUC-Gmo-039245	Gadus morhua	37.50	2.00e-114	405.00
IUUC-Gga-040806	Gallus gallus	39.39	1.00e-119	423.00
IUUC-Gac-042177	Gasterosteus aculeatus	36.09	5.00e-118	418.00
IUUC-Gma-044187	Glycine max	75.66	0.00e+00	1032.00
IUUC-Ggo-044430	Gorilla gorilla	35.17	5.00e-72	265.00
IUUC-Hsa-045853	Homo sapiens	39.39	1.00e-120	427.00
IUUC-Itr-048238	Ictidomys tridecemlineatus	50.22	1.00e-63	235.00
IUUC-Lch-050420	Latimeria chalumnae	39.15	6.00e-121	427.00
IUUC-Lpe-051219	Leersia perrieri	71.31	0.00e+00	918.00
IUUC-Loc-052728	Lepisosteus oculatus	38.79	7.00e-114	404.00
IUUC-Laf-053775	Loxodonta africana	39.02	4.00e-120	425.00
IUUC-Meu-056595	Macropus eugenii	38.71	1.00e-51	197.00
IUUC-Mtr-058555	Medicago truncatula	76.13	0.00e+00	1061.00
IUUC-Mga-059646	Meleagris gallopavo	39.13	3.00e-112	399.00
IUUC-Mmr-060990	Microcebus murinus	39.33	4.00e-120	425.00
IUUC-Mdo-062287	Monodelphis domestica	39.39	2.00e-120	426.00
IUUC-Mmu-064097	Mus musculus	39.39	6.00e-121	427.00
IUUC-Mac-065240	Musa acuminata	73.62	0.00e+00	941.00
IUUC-Mpu-066612	Mustela putorius furo	38.97	3.00e-113	402.00
IUUC-Mlu-067967	Myotis lucifugus	38.68	1.00e-111	396.00
IUUC-Nle-069543	Nomascus leucogenys	39.39	1.00e-120	426.00
IUUC-Opr-070366	Ochotona princeps	43.78	7.00e-44	171.00
IUUC-Ont-071522	Oreochromis niloticus	37.79	9.00e-120	424.00
IUUC-Oan-073409	Ornithorhynchus anatinus	39.23	3.00e-113	402.00
IUUC-Ocu-073756	Oryctolagus cuniculus	39.15	1.00e-115	410.00
IUUC-Oba-075149	Oryza barthii	71.38	0.00e+00	933.00
IUUC-Obr-076563	Oryza brachyantha	72.31	0.00e+00	938.00
IUUC-Ogl-077701	Oryza glaberrima	71.74	0.00e+00	938.00
IUUC-Ogu-078383	Oryza glumaepatula	71.74	0.00e+00	938.00
IUUC-Oin-079965	Oryza indica	67.82	0.00e+00	857.00
IUUC-Olo-080639	Oryza longistaminata	69.79	0.00e+00	922.00
IUUC-Ome-081821	Oryza meridionalis	71.02	0.00e+00	862.00
IUUC-Oni-082622	Oryza nivara	71.74	0.00e+00	938.00
IUUC-Opu-083295	Oryza punctata	71.59	0.00e+00	936.00
IUUC-Oru-084661	Oryza rufipogon	71.74	0.00e+00	938.00
IUUC-Osa-085766	Oryza sativa	71.74	0.00e+00	938.00
IUUC-Ola-086727	Oryzias latipes	38.29	6.00e-121	427.00
IUUC-Oga-088215	Otolemur garnettii	38.99	9.00e-116	410.00
IUUC-Oar-089880	Ovis aries	38.99	1.00e-115	409.00
IUUC-Ptr-090597	Pan troglodytes	39.39	1.00e-120	427.00
IUUC-Pan-091987	Papio anubis	39.39	9.00e-121	427.00
IUUC-Psi-094033	Pelodiscus sinensis	40.19	8.00e-117	414.00
IUUC-Pma-094587	Petromyzon marinus	37.78	3.00e-103	368.00
IUUC-Ppa-095401	Physcomitrella patens	61.13	0.00e+00	811.00
IUUC-Pfo-097388	Poecilia formosa	36.48	3.00e-118	419.00
IUUC-Pab-098029	Pongo abelii	39.39	1.00e-120	426.00
IUUC-Pop-099319	Populus trichocarpa	74.82	0.00e+00	1051.00
IUUC-Pca-100846	Procavia capensis	46.21	1.00e-99	357.00
IUUC-Ppe-101250	Prunus persica	67.08	0.00e+00	850.00
IUUC-Pva-102407	Pteropus vampyrus	39.24	4.00e-117	415.00
IUUC-Rno-105312	Rattus norvegicus	39.39	1.00e-120	426.00
IUUC-Sha-106514	Sarcophilus harrisii	45.97	4.00e-95	341.00
IUUC-Smo-109418	Selaginella moellendorffii	61.68	0.00e+00	772.00
IUUC-Sit-110248	Setaria italica	72.06	0.00e+00	942.00
IUUC-Sly-110895	Solanum lycopersicum	75.66	0.00e+00	1042.00
IUUC-Stu-112386	Solanum tuberosum	72.78	0.00e+00	990.00
IUUC-Sar-113230	Sorex araneus	41.86	1.00e-63	237.00
IUUC-Sbi-113962	Sorghum bicolor	67.15	0.00e+00	921.00
IUUC-Ssc-115987	Sus scrofa	29.30	2.00e-27	116.00
IUUC-Tgu-116471	Taeniopygia guttata	39.18	1.00e-118	420.00
IUUC-Tru-118231	Takifugu rubripes	38.91	4.00e-117	415.00
IUUC-Tsy-119415	Tarsius syrichta	38.81	5.00e-112	397.00
IUUC-Tni-120893	Tetraodon nigroviridis	46.46	1.00e-101	363.00
IUUC-Tca-121619	Theobroma cacao	77.44	0.00e+00	1088.00
IUUC-Tae-125524	Triticum aestivum	71.00	0.00e+00	941.00
IUUC-Tur-126557	Triticum urartu	71.04	0.00e+00	921.00
IUUC-Tbe-127253	Tupaia belangeri	42.16	4.00e-65	242.00
IUUC-Ttr-129100	Tursiops truncatus	38.85	2.00e-111	396.00
IUUC-Vpa-130613	Vicugna pacos	35.50	3.00e-96	345.00
IUUC-Vvi-131386	Vitis vinifera	73.05	0.00e+00	1008.00
IUUC-Xtr-132033	Xenopus tropicalis	39.57	6.00e-127	447.00
IUUC-Xma-133421	Xiphophorus maculatus	36.63	1.00e-118	420.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence