iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Xma-133672

Ensembl Protein ID

ENSXMAP00000014930.1

UniProt Accession

M4AKD6; M4AKD6_XIPMA

Genbank Protein ID

ENSXMAP00000014930

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGAJ01025086

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXMAG00000014866.1	ENSXMAT00000014950.1	ENSXMAP00000014930.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.70e-53	175.6	527	566
UBD/Beta-Prp	3.90e-92	308.6	340	640

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllks 38
           gH  ++++++f   d +l+s+s Dgt k+W l ++ +lk+
   Q: 527  GHRRGIWSVCFspVDQILASSSADGTTKLWGLQDFSCLKT 566
           8**********965599*******************9986 PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkf.spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls....tgkcvh 88
           + g++++v+  vkf  +d+++++++  +  +kv+++ t ++ + l+gh+++v +++  ++g++++++++Dr ++vw l+    +  cv 
   Q: 340  FVGYNDEVLD-VKFlGKDDTHIVVATNSCQLKVFQLLTNSC-QILYGHTDTVLTLDVFKKGSLFASCAKDRSVRVWQLNsdsgQVRCVA 426
           5677888888.9999889999999999***********888.**********************************5555555999999 PP
   S: 89   tlkghedsvlslsfsp.sgdklvsGshdrtirvwdletgqclee........tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl.. 166
             + h++ v s+s s+ + +++v+Gs+d t++vwdl+ +  +ee        t++ hd+ vn+v+v+p+++ll+sGs Drt +lW+l  
   Q: 427  QGSSHTNAVGSISCSRmKASFIVTGSQDCTVKVWDLPAEFSSEEihqlsprsTEKAHDKDVNSVSVSPNDKLLASGSQDRTAKLWSLsg 515
           999*************555*********************9999*******************************************77 PP
   S: 167  .ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsg 254
             +  ll  ++g h + + s+ f++  + l+s s dgt klw lq  +c++t++gh++ v+ v f ++++ l++ +sDg +++W ++++
   Q: 516  dGNLGLLGVFRG-HRRGIWSVCFSPVDQILASSSADGTTKLWGLQDFSCLKTFEGHDASVLKVIFVSRGTQLLTSGSDGLVKLWTIKTN 603
           7666789999*9.**************************************************************************** PP
   S: 255  dllktlqlhnssvisvavlsfgdnvlvlgsedskvniw 292
           +++ktl  h+++v+   + s +d ++v+gs+ds++ +w
   Q: 604  ECVKTLDAHQDKVWGLHG-SRKDDKMVTGSADSNITVW 640
           ******************.999***************9 PP

Organism

Xiphophorus maculatus

Protein Sequence
(Fasta)

MANTNLQFKT NYAVSSKIEP FYKGGKVQIS KDEKYIFCTC GSRVNVLEIS TGKIVHCVEH 60
DDQEDITSFA VSCDDELLVT ASRALLLKQW DWRQGTCTRS WKAIHTIPVA SMTFDPSSTL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGACTCGGG CAACAACATG CGGAACGGAT GGTGGCGGCT GTAGTCAACG TGTGAAATGA 60
GAAACCGGTG ATTTATATCG TGTTTGTTTA CTAAAAATAT TCTGCTTTGG AGGTTCCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0032040--C:small-subunit processome
GO:0030098--P:lymphocyte differentiation
GO:0010564--P:regulation of cell cycle process
GO:0006364--P:rRNA processing
GO:0048538--P:thymus development

KEGG

xma:102217624

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	36.28	2.00e-147	516.00
IUUC-Aml-002376	Ailuropoda melanoleuca	61.64	0.00e+00	977.00
IUUC-Atr-002486	Amborella trichopoda	38.55	6.00e-163	568.00
IUUC-Apl-003519	Anas platyrhynchos	51.81	0.00e+00	696.00
IUUC-Aca-004363	Anolis carolinensis	60.55	2.00e-161	562.00
IUUC-Aly-006152	Arabidopsis lyrata	37.16	7.00e-153	534.00
IUUC-Ath-006966	Arabidopsis thaliana	37.53	2.00e-153	536.00
IUUC-Ago-007746	Ashbya gossypii	28.14	3.00e-93	336.00
IUUC-Acl-008009	Aspergillus clavatus	28.16	3.00e-102	366.00
IUUC-Afl-008681	Aspergillus flavus	28.20	9.00e-93	335.00
IUUC-Afu-008798	Aspergillus fumigatus	27.59	9.00e-90	325.00
IUUC-Ani-009278	Aspergillus nidulans	27.33	2.00e-94	340.00
IUUC-Ang-009640	Aspergillus niger	28.79	3.00e-97	350.00
IUUC-Aor-010160	Aspergillus oryzae	28.31	2.00e-92	333.00
IUUC-Ate-010320	Aspergillus terreus	27.30	2.00e-97	350.00
IUUC-Ame-010930	Astyanax mexicanus	78.61	4.00e-96	343.00
IUUC-Bgr-012054	Blumeria graminis	27.96	1.00e-92	334.00
IUUC-Bta-012611	Bos taurus	62.36	0.00e+00	962.00
IUUC-Bci-013797	Botrytis cinerea	28.92	3.00e-109	389.00
IUUC-Bdi-014384	Brachypodium distachyon	39.45	4.00e-165	575.00
IUUC-Bol-016483	Brassica oleracea	38.00	5.00e-157	548.00
IUUC-Bra-017328	Brassica rapa	37.15	2.00e-153	536.00
IUUC-Cel-018664	Caenorhabditis elegans	32.02	8.00e-123	434.00
IUUC-Cja-019092	Callithrix jacchus	62.16	0.00e+00	998.00
IUUC-Cfa-021040	Canis familiaris	60.47	0.00e+00	962.00
IUUC-Cpo-022529	Cavia porcellus	62.00	0.00e+00	959.00
IUUC-Cre-022986	Chlamydomonas reinhardtii	54.35	1.00e-42	165.00
IUUC-Csa-024205	Chlorocebus sabaeus	61.53	0.00e+00	991.00
IUUC-Cin-025560	Ciona intestinalis	46.26	0.00e+00	723.00
IUUC-Cgl-026481	Colletotrichum gloeosporioides	29.02	4.00e-108	386.00
IUUC-Cne-027082	Cryptococcus neoformans	31.58	6.00e-120	425.00
IUUC-Cme-027159	Cyanidioschyzon merolae	24.40	2.00e-36	148.00
IUUC-Dre-028138	Danio rerio	66.05	0.00e+00	1107.00
IUUC-Dno-029914	Dasypus novemcinctus	55.31	0.00e+00	696.00
IUUC-Dor-030685	Dipodomys ordii	53.97	0.00e+00	639.00
IUUC-Dse-031429	Dothistroma septosporum	28.08	5.00e-99	355.00
IUUC-Dme-031995	Drosophila melanogaster	33.29	5.00e-119	422.00
IUUC-Ete-033086	Echinops telfairi	64.27	2.00e-156	546.00
IUUC-Eca-034354	Equus caballus	61.61	0.00e+00	955.00
IUUC-Eeu-034832	Erinaceus europaeus	65.72	4.00e-166	578.00
IUUC-Fca-036136	Felis catus	50.43	0.00e+00	749.00
IUUC-Fal-036859	Ficedula albicollis	63.84	0.00e+00	1023.00
IUUC-Fox-037863	Fusarium oxysporum	29.74	6.00e-97	348.00
IUUC-Fso-038389	Fusarium solani	28.90	7.00e-106	378.00
IUUC-Gmo-038711	Gadus morhua	76.61	0.00e+00	1231.00
IUUC-Ggr-039820	Gaeumannomyces graminis	28.05	3.00e-99	356.00
IUUC-Gga-040263	Gallus gallus	64.38	0.00e+00	1053.00
IUUC-Gac-041291	Gasterosteus aculeatus	78.80	0.00e+00	1451.00
IUUC-Gma-044328	Glycine max	40.32	2.00e-173	603.00
IUUC-Ggo-044693	Gorilla gorilla	61.90	0.00e+00	976.00
IUUC-Hsa-046048	Homo sapiens	62.16	0.00e+00	978.00
IUUC-Hvu-047608	Hordeum vulgare	38.63	1.00e-166	580.00
IUUC-Itr-048391	Ictidomys tridecemlineatus	62.86	0.00e+00	1014.00
IUUC-Kpa-049209	Komagataella pastoris	29.79	6.00e-105	375.00
IUUC-Lch-050085	Latimeria chalumnae	67.20	0.00e+00	1066.00
IUUC-Lpe-050945	Leersia perrieri	38.56	1.00e-161	563.00
IUUC-Loc-052679	Lepisosteus oculatus	73.70	0.00e+00	1253.00
IUUC-Laf-053685	Loxodonta africana	60.85	0.00e+00	909.00
IUUC-Mcc-055861	Macaca mulatta	61.53	0.00e+00	974.00
IUUC-Meu-056820	Macropus eugenii	48.48	0.00e+00	674.00
IUUC-Mor-057234	Magnaporthe oryzae	27.89	2.00e-96	347.00
IUUC-Mpo-057456	Magnaporthe poae	27.97	1.00e-79	291.00
IUUC-Mtr-058122	Medicago truncatula	39.64	3.00e-172	599.00
IUUC-Mla-058980	Melampsora laricipopulina	31.53	4.00e-88	319.00
IUUC-Mga-060080	Meleagris gallopavo	64.65	0.00e+00	1046.00
IUUC-Mvi-060338	Microbotryum violaceum	36.14	2.00e-149	523.00
IUUC-Mmr-060762	Microcebus murinus	61.56	0.00e+00	972.00
IUUC-Mdo-061975	Monodelphis domestica	61.38	0.00e+00	962.00
IUUC-Mmu-064038	Mus musculus	62.58	0.00e+00	968.00
IUUC-Mac-065189	Musa acuminata	36.71	7.00e-161	561.00
IUUC-Mpu-066526	Mustela putorius furo	61.73	0.00e+00	956.00
IUUC-Mlu-067716	Myotis lucifugus	62.28	0.00e+00	1031.00
IUUC-Nfi-068474	Neosartorya fischeri	27.77	1.00e-92	334.00
IUUC-Ncr-068826	Neurospora crassa	27.39	2.00e-94	340.00
IUUC-Nle-069832	Nomascus leucogenys	60.17	0.00e+00	998.00
IUUC-Opr-071183	Ochotona princeps	59.53	0.00e+00	915.00
IUUC-Ont-072371	Oreochromis niloticus	82.12	0.00e+00	1488.00
IUUC-Oan-073491	Ornithorhynchus anatinus	60.96	0.00e+00	865.00
IUUC-Oba-075963	Oryza barthii	41.90	2.00e-162	566.00
IUUC-Obr-076173	Oryza brachyantha	40.59	2.00e-165	576.00
IUUC-Ogl-077692	Oryza glaberrima	41.90	1.00e-162	566.00
IUUC-Ogu-078965	Oryza glumaepatula	41.90	1.00e-162	566.00
IUUC-Oin-079708	Oryza indica	41.90	1.00e-162	566.00
IUUC-Olo-080679	Oryza longistaminata	41.69	3.00e-162	565.00
IUUC-Oni-082960	Oryza nivara	41.90	1.00e-162	566.00
IUUC-Opu-083282	Oryza punctata	40.17	4.00e-158	551.00
IUUC-Oru-085224	Oryza rufipogon	41.90	1.00e-162	567.00
IUUC-Osa-085320	Oryza sativa	41.90	1.00e-162	567.00
IUUC-Ola-086370	Oryzias latipes	68.43	0.00e+00	699.00
IUUC-Olu-087814	Ostreococcus lucimarinus	30.73	2.00e-96	347.00
IUUC-Oga-088458	Otolemur garnettii	60.83	0.00e+00	1007.00
IUUC-Oar-090032	Ovis aries	56.30	0.00e+00	687.00
IUUC-Ptr-090749	Pan troglodytes	62.25	0.00e+00	978.00
IUUC-Pan-091691	Papio anubis	59.90	0.00e+00	931.00
IUUC-Psi-093200	Pelodiscus sinensis	66.34	0.00e+00	1082.00
IUUC-Pma-094165	Petromyzon marinus	54.70	0.00e+00	692.00
IUUC-Pno-095048	Phaeosphaeria nodorum	29.69	4.00e-88	319.00
IUUC-Ppa-095336	Physcomitrella patens	41.56	3.00e-177	615.00
IUUC-Pfo-096132	Poecilia formosa	94.82	0.00e+00	1575.00
IUUC-Pab-097855	Pongo abelii	61.90	0.00e+00	995.00
IUUC-Pop-099434	Populus trichocarpa	36.26	1.00e-156	546.00
IUUC-Pca-100232	Procavia capensis	57.36	3.00e-113	402.00
IUUC-Ppe-101665	Prunus persica	37.75	7.00e-160	558.00
IUUC-Pva-102178	Pteropus vampyrus	62.36	0.00e+00	984.00
IUUC-Pgr-103288	Puccinia graminis	29.53	2.00e-85	310.00
IUUC-Ptt-103808	Puccinia triticina	31.87	4.00e-83	302.00
IUUC-Pte-104205	Pyrenophora teres	30.25	9.00e-104	371.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	30.23	4.00e-96	346.00
IUUC-Rno-105617	Rattus norvegicus	62.61	0.00e+00	978.00
IUUC-Sce-106281	Saccharomyces cerevisiae	29.26	3.00e-99	356.00
IUUC-Sha-107378	Sarcophilus harrisii	61.01	0.00e+00	952.00
IUUC-Sja-107718	Schizosaccharomyces japonicus	34.20	2.00e-125	442.00
IUUC-Spo-108361	Schizosaccharomyces pombe	32.46	1.00e-117	417.00
IUUC-Ssl-108592	Sclerotinia sclerotiorum	29.04	6.00e-110	392.00
IUUC-Smo-109257	Selaginella moellendorffii	38.99	2.00e-164	572.00
IUUC-Sit-110258	Setaria italica	39.20	1.00e-168	587.00
IUUC-Sly-111521	Solanum lycopersicum	36.78	3.00e-160	559.00
IUUC-Stu-112718	Solanum tuberosum	48.55	7.00e-33	132.00
IUUC-Sar-113586	Sorex araneus	50.53	2.00e-40	160.00
IUUC-Sbi-114768	Sorghum bicolor	39.10	4.00e-167	582.00
IUUC-Sre-115159	Sporisorium reilianum	34.31	4.00e-99	356.00
IUUC-Ssc-116342	Sus scrofa	44.49	8.00e-169	587.00
IUUC-Tgu-117320	Taeniopygia guttata	62.70	0.00e+00	987.00
IUUC-Tru-118024	Takifugu rubripes	82.11	0.00e+00	1359.00
IUUC-Tni-119971	Tetraodon nigroviridis	81.12	0.00e+00	1294.00
IUUC-Tca-121248	Theobroma cacao	38.70	1.00e-161	563.00
IUUC-Tre-122079	Trichoderma reesei	29.63	3.00e-100	359.00
IUUC-Tvi-122554	Trichoderma virens	29.48	2.00e-98	353.00
IUUC-Tae-125865	Triticum aestivum	38.64	3.00e-163	569.00
IUUC-Tur-126436	Triticum urartu	37.81	9.00e-134	470.00
IUUC-Tme-126942	Tuber melanosporum	32.18	1.00e-106	381.00
IUUC-Tbe-128000	Tupaia belangeri	65.13	2.00e-61	230.00
IUUC-Ttr-128964	Tursiops truncatus	60.40	0.00e+00	958.00
IUUC-Uma-129473	Ustilago maydis	32.38	4.00e-104	372.00
IUUC-Vda-129749	Verticillium dahliae	29.77	6.00e-95	342.00
IUUC-Vvi-131511	Vitis vinifera	39.52	3.00e-162	565.00
IUUC-Xtr-132816	Xenopus tropicalis	61.17	0.00e+00	971.00
IUUC-Yli-134602	Yarrowia lipolytica	35.68	1.00e-139	490.00
IUUC-Zma-135559	Zea mays	40.26	1.00e-157	550.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence