iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Yli-134602

Ensembl Protein ID

CAG80271

UniProt Accession

Q6C3U5; Q6C3U5_YARLI

Genbank Protein ID

CAG80271.1

Protein Name

YALI0E32043p

Genbank Nucleotide ID

CR382131

Gene Name

YALI0_E32043g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
YALI0_E32043g	CAG80271	CAG80271

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.10e-52	169.2	494	533
UBD/Beta-Prp	1.30e-86	288.9	422	614

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH+ +v++++f +  + +v+Gs+D+t+kvW+l ++ +l++
   Q: 494  GHKRGVWSIKFnPYeKQIVTGSGDKTVKVWSLNDFSCLRT 533
           8**********977799******************99985 PP

UBD/Beta-Prp

   S: 65   kilvtgseDrtikvwdls...tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvr 162
           ++l+tgs+D tik w++    t k  +t k+he+++ +l++sp++  ++++s+drt++vwd+++g+ +  +l+gh++ v++++++p ++ +v+Gs D+tv+
   Q: 422  QFLITGSQDLTIKKWNIAkdgTAKAEYTRKAHEKDINALDVSPNDRLFATASQDRTAKVWDMNSGEAVG-VLRGHKRGVWSIKFNPYEKQIVTGSGDKTVK 521
           3899***********999989999999999*************99***********************9.****************99************* PP
   S: 163  lWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs..pnderlvsgssDgsiriW.dlrs 253
           +W+l+  ++lrt++g ht+sv  + ++s g ++vs + dg +k+w + +gec +tl +h+d v+s+++   +++  +vsg  +g+i +W d+  
   Q: 522  VWSLNDFSCLRTFEG-HTNSVLRTVWTSLGSQIVSSGGDGLIKVWTYASGECAVTLDNHEDKVWSLAVRgsDDGAQMVSGDGEGTITVWkDISD 614
           *************99.************************************************9999888999999***9********85443 PP

Organism

Yarrowia lipolytica

Protein Sequence
(Fasta)

METTEKTAFE AVSVEPFYTG GKTSLADDGY TLATSFGEDV VVTNIKTGEE ICRIEGDSEI 60
LTTLEISPDA QYLVTCSRSL TMRTYRIPSG ELVRSARAHD APVIVMAIDS SSSLVATGGA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAACGA CGGAAAAGAC TGCGTTCGAA GCCGTATCCG TGGAGCCTTT CTACACCGGC 60
GGCAAGACCT CTCTCGCCGA CGACGGGTAC ACCCTGGCCA CCTCTTTTGG AGAGGACGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000480--P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000447--P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472--P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

yli:YALI0E32043g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	34.23	3.00e-122	431.00
IUUC-Aml-002376	Ailuropoda melanoleuca	34.61	1.00e-135	475.00
IUUC-Atr-002486	Amborella trichopoda	34.28	8.00e-138	482.00
IUUC-Apl-003519	Anas platyrhynchos	34.86	9.00e-126	442.00
IUUC-Aca-004363	Anolis carolinensis	32.55	4.00e-62	229.00
IUUC-Aly-006152	Arabidopsis lyrata	34.11	1.00e-128	452.00
IUUC-Ath-006966	Arabidopsis thaliana	33.62	3.00e-126	443.00
IUUC-Ago-007746	Ashbya gossypii	39.46	3.00e-169	586.00
IUUC-Acl-008009	Aspergillus clavatus	39.19	8.00e-173	598.00
IUUC-Afl-008681	Aspergillus flavus	38.10	4.00e-157	546.00
IUUC-Afu-008798	Aspergillus fumigatus	38.00	2.00e-156	544.00
IUUC-Ani-009278	Aspergillus nidulans	38.72	3.00e-171	593.00
IUUC-Ang-009640	Aspergillus niger	40.07	3.00e-173	600.00
IUUC-Aor-010160	Aspergillus oryzae	38.10	3.00e-157	546.00
IUUC-Ate-010320	Aspergillus terreus	38.10	5.00e-167	579.00
IUUC-Ame-010930	Astyanax mexicanus	40.41	1.00e-37	147.00
IUUC-Bgr-012054	Blumeria graminis	38.77	4.00e-169	586.00
IUUC-Bta-012611	Bos taurus	35.24	2.00e-130	457.00
IUUC-Bci-013797	Botrytis cinerea	41.06	1.00e-178	618.00
IUUC-Bdi-014384	Brachypodium distachyon	36.36	5.00e-139	486.00
IUUC-Bol-015097	Brassica oleracea	34.15	2.00e-125	441.00
IUUC-Bra-017798	Brassica rapa	34.61	1.00e-125	442.00
IUUC-Cel-018664	Caenorhabditis elegans	30.86	3.00e-102	363.00
IUUC-Cja-019092	Callithrix jacchus	34.52	3.00e-136	477.00
IUUC-Cfa-021040	Canis familiaris	35.05	5.00e-135	473.00
IUUC-Cpo-022529	Cavia porcellus	35.23	2.00e-130	457.00
IUUC-Cre-022986	Chlamydomonas reinhardtii	58.21	6.00e-46	174.00
IUUC-Csa-024205	Chlorocebus sabaeus	34.64	1.00e-135	475.00
IUUC-Cin-025560	Ciona intestinalis	33.33	6.00e-126	442.00
IUUC-Cgl-026481	Colletotrichum gloeosporioides	40.30	5.00e-179	619.00
IUUC-Cne-027082	Cryptococcus neoformans	34.99	1.00e-145	508.00
IUUC-Cme-027159	Cyanidioschyzon merolae	22.73	1.00e-26	114.00
IUUC-Dre-028138	Danio rerio	38.13	5.00e-128	449.00
IUUC-Dno-029914	Dasypus novemcinctus	34.67	3.00e-95	340.00
IUUC-Dor-030685	Dipodomys ordii	34.58	2.00e-86	311.00
IUUC-Dse-031429	Dothistroma septosporum	38.69	6.00e-179	619.00
IUUC-Dme-031995	Drosophila melanogaster	27.00	1.00e-80	291.00
IUUC-Ete-033086	Echinops telfairi	36.60	5.00e-80	290.00
IUUC-Eca-034354	Equus caballus	34.86	5.00e-129	453.00
IUUC-Eeu-034832	Erinaceus europaeus	35.53	7.00e-80	289.00
IUUC-Fca-036136	Felis catus	34.01	2.00e-128	451.00
IUUC-Fal-036859	Ficedula albicollis	34.84	1.00e-138	484.00
IUUC-Fox-037863	Fusarium oxysporum	37.85	1.00e-154	538.00
IUUC-Fso-038389	Fusarium solani	38.85	1.00e-173	601.00
IUUC-Gmo-038711	Gadus morhua	32.44	3.00e-118	417.00
IUUC-Ggr-039820	Gaeumannomyces graminis	38.66	5.00e-167	579.00
IUUC-Gga-040263	Gallus gallus	35.50	3.00e-141	494.00
IUUC-Gac-041291	Gasterosteus aculeatus	35.16	7.00e-141	492.00
IUUC-Gma-044328	Glycine max	35.27	6.00e-142	496.00
IUUC-Ggo-044693	Gorilla gorilla	34.39	1.00e-134	471.00
IUUC-Hsa-046048	Homo sapiens	34.77	6.00e-136	476.00
IUUC-Hvu-047608	Hordeum vulgare	35.58	7.00e-136	476.00
IUUC-Itr-048391	Ictidomys tridecemlineatus	35.11	2.00e-140	491.00
IUUC-Kpa-049209	Komagataella pastoris	42.71	0.00e+00	664.00
IUUC-Lch-050085	Latimeria chalumnae	34.72	6.00e-128	449.00
IUUC-Lpe-050945	Leersia perrieri	35.88	4.00e-133	466.00
IUUC-Loc-052679	Lepisosteus oculatus	36.44	1.00e-152	532.00
IUUC-Laf-053685	Loxodonta africana	34.31	1.00e-122	432.00
IUUC-Mcc-055861	Macaca mulatta	34.64	1.00e-134	471.00
IUUC-Meu-056820	Macropus eugenii	32.04	4.00e-97	347.00
IUUC-Mor-057234	Magnaporthe oryzae	37.88	2.00e-160	557.00
IUUC-Mpo-057456	Magnaporthe poae	38.73	9.00e-127	445.00
IUUC-Mtr-058122	Medicago truncatula	34.02	2.00e-139	487.00
IUUC-Mla-058980	Melampsora laricipopulina	32.71	4.00e-121	426.00
IUUC-Mga-060080	Meleagris gallopavo	35.34	7.00e-138	482.00
IUUC-Mvi-060338	Microbotryum violaceum	40.16	2.00e-167	580.00
IUUC-Mmr-060762	Microcebus murinus	34.72	6.00e-132	462.00
IUUC-Mdo-061975	Monodelphis domestica	35.68	1.00e-132	465.00
IUUC-Mmu-064038	Mus musculus	35.49	4.00e-133	466.00
IUUC-Mac-065189	Musa acuminata	34.88	5.00e-143	499.00
IUUC-Mpu-066526	Mustela putorius furo	34.73	2.00e-130	457.00
IUUC-Mlu-067716	Myotis lucifugus	35.61	7.00e-144	502.00
IUUC-Nfi-068474	Neosartorya fischeri	38.39	4.00e-161	560.00
IUUC-Ncr-068826	Neurospora crassa	37.55	4.00e-165	573.00
IUUC-Nle-069832	Nomascus leucogenys	35.11	2.00e-137	481.00
IUUC-Opr-071183	Ochotona princeps	34.68	3.00e-129	453.00
IUUC-Ont-072371	Oreochromis niloticus	36.62	1.00e-144	504.00
IUUC-Oan-073491	Ornithorhynchus anatinus	34.71	1.00e-110	392.00
IUUC-Ocu-074286	Oryctolagus cuniculus	22.08	4.00e-27	115.00
IUUC-Oba-075963	Oryza barthii	37.35	6.00e-139	486.00
IUUC-Obr-076173	Oryza brachyantha	36.61	2.00e-135	474.00
IUUC-Ogl-077692	Oryza glaberrima	37.35	6.00e-139	486.00
IUUC-Ogu-078965	Oryza glumaepatula	37.48	4.00e-139	486.00
IUUC-Oin-079708	Oryza indica	37.22	2.00e-138	484.00
IUUC-Olo-080679	Oryza longistaminata	36.83	8.00e-137	479.00
IUUC-Oni-082960	Oryza nivara	37.22	3.00e-138	484.00
IUUC-Opu-083282	Oryza punctata	36.96	9.00e-135	472.00
IUUC-Oru-085224	Oryza rufipogon	37.35	5.00e-139	486.00
IUUC-Osa-085320	Oryza sativa	37.35	5.00e-139	486.00
IUUC-Ola-086370	Oryzias latipes	31.06	3.00e-61	228.00
IUUC-Olu-087814	Ostreococcus lucimarinus	32.17	1.00e-98	352.00
IUUC-Oga-088458	Otolemur garnettii	34.97	6.00e-142	496.00
IUUC-Oar-090032	Ovis aries	32.50	3.00e-91	327.00
IUUC-Ptr-090749	Pan troglodytes	34.90	2.00e-136	478.00
IUUC-Pan-091691	Papio anubis	33.63	3.00e-126	443.00
IUUC-Psi-093200	Pelodiscus sinensis	34.91	1.00e-141	494.00
IUUC-Pma-094165	Petromyzon marinus	33.38	2.00e-96	344.00
IUUC-Pno-095048	Phaeosphaeria nodorum	42.11	1.00e-148	518.00
IUUC-Ppa-095336	Physcomitrella patens	36.71	9.00e-144	502.00
IUUC-Pfo-096132	Poecilia formosa	35.72	9.00e-137	479.00
IUUC-Pab-097855	Pongo abelii	34.98	5.00e-137	479.00
IUUC-Pop-099434	Populus trichocarpa	31.74	5.00e-119	420.00
IUUC-Pca-100232	Procavia capensis	37.45	1.00e-46	179.00
IUUC-Ppe-101665	Prunus persica	34.16	2.00e-137	481.00
IUUC-Pva-102178	Pteropus vampyrus	35.11	5.00e-134	469.00
IUUC-Pgr-103288	Puccinia graminis	29.96	2.00e-109	388.00
IUUC-Ptt-103808	Puccinia triticina	32.33	4.00e-101	360.00
IUUC-Pte-104205	Pyrenophora teres	41.89	0.00e+00	632.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	40.23	3.00e-169	587.00
IUUC-Rno-105617	Rattus norvegicus	35.88	4.00e-133	466.00
IUUC-Sce-106281	Saccharomyces cerevisiae	40.32	2.00e-178	617.00
IUUC-Sha-107378	Sarcophilus harrisii	35.89	1.00e-132	465.00
IUUC-Sja-107718	Schizosaccharomyces japonicus	42.26	1.00e-175	608.00
IUUC-Spo-108361	Schizosaccharomyces pombe	40.49	5.00e-166	575.00
IUUC-Ssl-108592	Sclerotinia sclerotiorum	41.62	0.00e+00	653.00
IUUC-Smo-109257	Selaginella moellendorffii	36.41	4.00e-151	526.00
IUUC-Sit-110258	Setaria italica	34.55	8.00e-135	472.00
IUUC-Sly-111521	Solanum lycopersicum	34.32	6.00e-135	473.00
IUUC-Stu-112718	Solanum tuberosum	45.39	1.00e-31	126.00
IUUC-Sbi-114768	Sorghum bicolor	36.05	2.00e-139	487.00
IUUC-Sre-115159	Sporisorium reilianum	34.04	6.00e-128	449.00
IUUC-Ssc-116342	Sus scrofa	28.48	1.00e-62	232.00
IUUC-Tgu-117320	Taeniopygia guttata	35.44	2.00e-132	464.00
IUUC-Tru-118024	Takifugu rubripes	35.56	3.00e-138	483.00
IUUC-Tsy-119007	Tarsius syrichta	22.63	2.00e-26	113.00
IUUC-Tni-119971	Tetraodon nigroviridis	36.11	9.00e-143	498.00
IUUC-Tca-121248	Theobroma cacao	34.62	2.00e-134	471.00
IUUC-Tre-122079	Trichoderma reesei	38.45	3.00e-168	583.00
IUUC-Tvi-122554	Trichoderma virens	38.12	1.00e-166	578.00
IUUC-Tae-123690	Triticum aestivum	35.86	5.00e-137	479.00
IUUC-Tur-126436	Triticum urartu	34.43	6.00e-112	396.00
IUUC-Tme-126942	Tuber melanosporum	46.61	0.00e+00	670.00
IUUC-Ttr-128964	Tursiops truncatus	33.84	7.00e-132	462.00
IUUC-Uma-129473	Ustilago maydis	34.99	3.00e-124	437.00
IUUC-Vda-129749	Verticillium dahliae	40.05	8.00e-158	548.00
IUUC-Vvi-131511	Vitis vinifera	33.85	4.00e-130	456.00
IUUC-Xtr-132816	Xenopus tropicalis	30.15	4.00e-102	363.00
IUUC-Xma-133672	Xiphophorus maculatus	35.47	6.00e-139	486.00
IUUC-Zma-135559	Zea mays	35.91	1.00e-132	465.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence