iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAF	PhosphositePlus
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	98.56	2.00e-158	555.00	IUUC-Hsa-046012

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MSFVLSRMAA CGGSCKNKVT VSKPVWDFLS KETPARLARL REEHRVSILI DGETSDIYVL 60
QLSPQGPPPA PPNGLYLARK ALKGLLKEAE KELKKAQRQG ELMGCLALGG GGEHPELHRP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAATGGCGGC GCTGACGAGA GGTAGGTGAG CCCGGCGCCC CCACACCCAC CGCGTGCCCC 60
CCAGGCCGGG TCCGCACCCT CACAAGCTCC CCCGCTTTCC TCCGCCCCCT CCTCCGCCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0007219--P:Notch signaling pathway

KEGG

rno:500847

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001955	Ailuropoda melanoleuca	88.76	9.00e-146	509.00
IUUC-Aca-004581	Anolis carolinensis	73.43	3.00e-131	461.00
IUUC-Ame-010892	Astyanax mexicanus	45.43	1.00e-76	279.00
IUUC-Bta-013176	Bos taurus	98.56	2.00e-158	551.00
IUUC-Cja-020011	Callithrix jacchus	98.85	2.00e-159	555.00
IUUC-Csa-023491	Chlorocebus sabaeus	98.27	5.00e-159	553.00
IUUC-Dre-027528	Danio rerio	45.33	9.00e-79	286.00
IUUC-Dor-030132	Dipodomys ordii	98.80	3.00e-98	350.00
IUUC-Eca-034031	Equus caballus	99.14	9.00e-160	555.00
IUUC-Fca-035841	Felis catus	89.34	7.00e-149	519.00
IUUC-Gmo-039399	Gadus morhua	66.14	2.00e-74	271.00
IUUC-Gac-041788	Gasterosteus aculeatus	67.72	1.00e-76	279.00
IUUC-Hsa-046012	Homo sapiens	98.56	2.00e-159	555.00
IUUC-Itr-048095	Ictidomys tridecemlineatus	99.07	6.00e-144	503.00
IUUC-Lch-049613	Latimeria chalumnae	48.70	2.00e-89	322.00
IUUC-Loc-052211	Lepisosteus oculatus	66.67	8.00e-74	270.00
IUUC-Laf-054581	Loxodonta africana	97.21	2.00e-135	474.00
IUUC-Mcc-054728	Macaca mulatta	98.27	5.00e-159	553.00
IUUC-Meu-056607	Macropus eugenii	92.02	3.00e-56	211.00
IUUC-Mmr-061590	Microcebus murinus	98.56	1.00e-158	552.00
IUUC-Mmu-063092	Mus musculus	100.00	6.00e-161	560.00
IUUC-Mlu-067304	Myotis lucifugus	98.56	2.00e-158	551.00
IUUC-Nle-069146	Nomascus leucogenys	98.56	3.00e-160	557.00
IUUC-Opr-070349	Ochotona princeps	95.97	2.00e-151	528.00
IUUC-Ont-072659	Oreochromis niloticus	68.78	5.00e-77	281.00
IUUC-Oan-073678	Ornithorhynchus anatinus	85.71	7.00e-48	182.00
IUUC-Ocu-074233	Oryctolagus cuniculus	99.11	2.00e-153	535.00
IUUC-Ola-086410	Oryzias latipes	62.33	3.00e-51	193.00
IUUC-Oga-088601	Otolemur garnettii	98.27	1.00e-157	549.00
IUUC-Oar-089267	Ovis aries	90.49	6.00e-157	546.00
IUUC-Ptr-090762	Pan troglodytes	98.14	5.00e-144	503.00
IUUC-Pan-092025	Papio anubis	98.56	2.00e-159	555.00
IUUC-Pma-094498	Petromyzon marinus	55.56	7.00e-61	226.00
IUUC-Pfo-096782	Poecilia formosa	42.44	1.00e-64	239.00
IUUC-Pab-098746	Pongo abelii	96.36	2.00e-93	334.00
IUUC-Pva-102316	Pteropus vampyrus	97.98	4.00e-156	543.00
IUUC-Sha-107204	Sarcophilus harrisii	95.39	4.00e-155	540.00
IUUC-Ssc-115485	Sus scrofa	98.84	1.00e-156	545.00
IUUC-Tru-118523	Takifugu rubripes	67.91	5.00e-75	274.00
IUUC-Tni-120280	Tetraodon nigroviridis	68.98	9.00e-76	276.00
IUUC-Ttr-128361	Tursiops truncatus	97.98	6.00e-156	543.00
IUUC-Xtr-131966	Xenopus tropicalis	72.93	8.00e-132	463.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence