iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Xtr-132533

Ensembl Protein ID

ENSXETP00000022713.3

UniProt Accession

F6UDN2; F6UDN2_XENTR

Genbank Protein ID

ENSXETP00000022713

Protein Name

SLX4 structure-specific endonuclease subunit

Genbank Nucleotide ID

AAMC01012624

Gene Name

slx4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000010319.3	ENSXETT00000022713.3	ENSXETP00000022713.3

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/ZnF/UBZ	39.08	2.00e-90	333.00	IUUC-Hsa-047035

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

AQPRTKDLVL ERMQQFKRAC PNRMKINSAE PCDLNGIFFN SLSLPSNLSL LPSVNDQLQS 60
DSALAAALQM DIREQQKSLE DVGLFFCQLC QKDLTAMNSV IREQHVNRCL DQSESLGEAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCACAGCCCC GTACAAAGGA TCTGGTCTTG GAACGGATGC AGCAGTTTAA GAGGGCCTGT 60
CCTAACCGTA TGAAAATAAA TAGTGCAGAA CCATGTGACC TTAATGGTGA GTGACATTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000210--BTB/POZ_dom
IPR011333--SKP1/BTB/POZ
IPR018574--Structure-sp_endonuc_su_Slx4

PROSITE

PS50097--BTB

Pfam

PF00651--BTB
PF09494--Slx4

SMART

SM00225--BTB

Gene Ontology

GO:0033557--C:Slx1-Slx4 complex
GO:0017108--F:5'-flap endonuclease activity
GO:0006260--P:DNA replication
GO:0036297--P:interstrand cross-link repair
GO:0000706--P:meiotic DNA double-strand break processing
GO:0000712--P:resolution of meiotic recombination intermediates

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001225	Ailuropoda melanoleuca	42.39	8.00e-113	402.00
IUUC-Apl-003261	Anas platyrhynchos	41.97	2.00e-125	444.00
IUUC-Aca-004455	Anolis carolinensis	65.22	4.00e-22	95.10
IUUC-Ame-010993	Astyanax mexicanus	33.03	1.00e-09	55.80
IUUC-Bta-013472	Bos taurus	40.03	1.00e-92	335.00
IUUC-Cja-019406	Callithrix jacchus	39.16	2.00e-80	295.00
IUUC-Cfa-020129	Canis familiaris	41.04	1.00e-105	378.00
IUUC-Cpo-021944	Cavia porcellus	40.90	1.00e-107	384.00
IUUC-Csa-023941	Chlorocebus sabaeus	53.03	2.00e-27	117.00
IUUC-Cho-024847	Choloepus hoffmanni	37.54	2.00e-41	165.00
IUUC-Cin-025405	Ciona intestinalis	30.42	5.00e-14	71.60
IUUC-Csv-025916	Ciona savignyi	39.66	2.00e-08	52.80
IUUC-Dre-027764	Danio rerio	33.33	1.00e-69	258.00
IUUC-Dno-030083	Dasypus novemcinctus	37.39	1.00e-86	315.00
IUUC-Dor-031129	Dipodomys ordii	39.86	2.00e-59	224.00
IUUC-Dse-031510	Dothistroma septosporum	38.71	1.00e+00	29.30
IUUC-Ete-032536	Echinops telfairi	52.55	1.00e-26	115.00
IUUC-Eca-033407	Equus caballus	39.07	2.00e-69	258.00
IUUC-Eeu-034473	Erinaceus europaeus	54.67	9.00e-17	83.20
IUUC-Fca-035730	Felis catus	41.48	3.00e-106	380.00
IUUC-Fal-036850	Ficedula albicollis	42.78	1.00e-119	425.00
IUUC-Gmo-038677	Gadus morhua	37.32	5.00e-27	116.00
IUUC-Gga-041088	Gallus gallus	43.19	6.00e-124	439.00
IUUC-Gac-041824	Gasterosteus aculeatus	45.12	1.00e-15	75.90
IUUC-Ggo-045642	Gorilla gorilla	41.23	1.00e-83	305.00
IUUC-Hsa-047035	Homo sapiens	40.29	1.00e-90	328.00
IUUC-Itr-049010	Ictidomys tridecemlineatus	41.45	6.00e-100	359.00
IUUC-Kpa-049328	Komagataella pastoris	31.08	6.00e-04	39.30
IUUC-Lch-050364	Latimeria chalumnae	38.64	9.00e-67	249.00
IUUC-Loc-052423	Lepisosteus oculatus	38.69	4.00e-43	170.00
IUUC-Laf-053910	Loxodonta africana	39.08	3.00e-91	330.00
IUUC-Mcc-055883	Macaca mulatta	40.56	5.00e-90	326.00
IUUC-Meu-056224	Macropus eugenii	40.56	1.00e-55	211.00
IUUC-Mga-059880	Meleagris gallopavo	41.93	3.00e-120	427.00
IUUC-Mvi-060510	Microbotryum violaceum	32.89	3.00e-05	44.30
IUUC-Mmr-061715	Microcebus murinus	41.37	4.00e-103	370.00
IUUC-Mdo-062426	Monodelphis domestica	42.35	3.00e-109	390.00
IUUC-Mmu-063947	Mus musculus	39.63	6.00e-98	352.00
IUUC-Mpu-066184	Mustela putorius furo	40.52	3.00e-102	367.00
IUUC-Mlu-067533	Myotis lucifugus	38.69	6.00e-98	352.00
IUUC-Nle-069204	Nomascus leucogenys	40.60	1.00e-91	332.00
IUUC-Opr-070377	Ochotona princeps	39.97	2.00e-97	351.00
IUUC-Ont-072551	Oreochromis niloticus	36.35	2.00e-67	251.00
IUUC-Oan-073350	Ornithorhynchus anatinus	42.78	6.00e-53	201.00
IUUC-Ocu-074915	Oryctolagus cuniculus	39.62	1.00e-97	352.00
IUUC-Ola-087360	Oryzias latipes	43.89	1.00e-36	145.00
IUUC-Oga-089106	Otolemur garnettii	39.47	2.00e-66	248.00
IUUC-Oar-089289	Ovis aries	40.44	2.00e-89	324.00
IUUC-Ptr-091469	Pan troglodytes	40.37	9.00e-90	325.00
IUUC-Pan-091841	Papio anubis	39.14	3.00e-50	194.00
IUUC-Psi-093842	Pelodiscus sinensis	43.27	4.00e-108	386.00
IUUC-Pma-094732	Petromyzon marinus	45.71	4.00e-08	51.20
IUUC-Pfo-097299	Poecilia formosa	39.27	1.00e-34	142.00
IUUC-Pab-098271	Pongo abelii	40.85	1.00e-89	325.00
IUUC-Pca-100721	Procavia capensis	39.79	6.00e-95	343.00
IUUC-Pva-102276	Pteropus vampyrus	41.72	1.00e-109	392.00
IUUC-Rno-105619	Rattus norvegicus	39.42	2.00e-97	351.00
IUUC-Sha-106722	Sarcophilus harrisii	43.17	2.00e-114	407.00
IUUC-Sar-113673	Sorex araneus	43.02	2.00e-29	125.00
IUUC-Sre-115039	Sporisorium reilianum	33.33	7.00e-04	37.70
IUUC-Ssc-115383	Sus scrofa	39.09	5.00e-90	326.00
IUUC-Tgu-117243	Taeniopygia guttata	45.45	7.00e-73	267.00
IUUC-Tru-118092	Takifugu rubripes	40.26	2.00e-33	135.00
IUUC-Tsy-119362	Tarsius syrichta	38.63	6.00e-39	157.00
IUUC-Tni-120380	Tetraodon nigroviridis	65.62	1.00e-19	89.40
IUUC-Tbe-127404	Tupaia belangeri	40.87	3.00e-30	128.00
IUUC-Ttr-128317	Tursiops truncatus	40.53	8.00e-105	375.00
IUUC-Uma-129640	Ustilago maydis	34.67	4.00e-04	38.90
IUUC-Xma-134059	Xiphophorus maculatus	38.79	1.00e-34	142.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence