iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000006842.2	ENSCJAT00000013472.2	ENSCJAP00000012783.2
ENSCJAG00000006842.2	ENSCJAT00000013478.2	ENSCJAP00000012789.2
ENSCJAG00000006842.2	ENSCJAT00000013428.2	ENSCJAP00000012745.2
ENSCJAG00000006842.2	ENSCJAT00000013422.2	ENSCJAP00000012739.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.40e-18	65.1	324	357

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf...sd.tllvs..GsdDgtikvWDlrt 32
            vtc+af   ++ t l++   s+D+++ vWD+ +
   Q: 324  AVTCIAFsksNGgTNLCAvdDSNDHVLSVWDWQK 357
           59*******7556555555899*********865 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

DDSASAASSM EVTDRIASLE QRVQMQEDDI QLLKSALADV VRRLNITEEQ QAVLNRKGPT 60
KARPLMQTLP LRTTVNNGTV LPKKPSGSLP SPSGARKETA VPATKRLNRS VSLLNACKLN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAACTCCCCA GTGCCACGAA GCTCCATTTC ACTGACTGCA GCTGTCCCCG TGGGGCGCCC 60
AGTCTGCCCT TACTTGCCAT CACCCAGATG CACAGGATTC TTGTGGCAGA AAGCAGGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR005108--HELP
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF03451--HELP
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:1990023--C:mitotic spindle midzone
GO:0097431--C:mitotic spindle pole
GO:0007420--P:brain development
GO:0002244--P:hematopoietic progenitor cell differentiation
GO:0007052--P:mitotic spindle organization
GO:0007405--P:neuroblast proliferation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002077	Ailuropoda melanoleuca	94.74	0.00e+00	1510.00
IUUC-Apl-004179	Anas platyrhynchos	90.89	0.00e+00	1452.00
IUUC-Aca-004993	Anolis carolinensis	87.45	0.00e+00	1405.00
IUUC-Ame-011332	Astyanax mexicanus	76.97	0.00e+00	1301.00
IUUC-Bta-013419	Bos taurus	81.80	0.00e+00	1275.00
IUUC-Cel-018623	Caenorhabditis elegans	28.87	2.00e-82	300.00
IUUC-Cfa-021276	Canis familiaris	94.59	0.00e+00	1487.00
IUUC-Csa-023355	Chlorocebus sabaeus	99.25	0.00e+00	1571.00
IUUC-Cin-025784	Ciona intestinalis	56.16	0.00e+00	754.00
IUUC-Csv-026305	Ciona savignyi	47.76	0.00e+00	753.00
IUUC-Dre-028728	Danio rerio	76.13	0.00e+00	1280.00
IUUC-Dno-029055	Dasypus novemcinctus	95.08	0.00e+00	1542.00
IUUC-Dor-030628	Dipodomys ordii	95.20	0.00e+00	1501.00
IUUC-Dme-032093	Drosophila melanogaster	37.85	7.00e-121	428.00
IUUC-Ete-032845	Echinops telfairi	94.78	0.00e+00	812.00
IUUC-Eca-034266	Equus caballus	93.84	0.00e+00	1542.00
IUUC-Fca-035446	Felis catus	93.90	0.00e+00	1475.00
IUUC-Fal-036734	Ficedula albicollis	92.25	0.00e+00	1483.00
IUUC-Gmo-038689	Gadus morhua	73.41	0.00e+00	1256.00
IUUC-Gga-040934	Gallus gallus	93.05	0.00e+00	1131.00
IUUC-Gac-042476	Gasterosteus aculeatus	75.15	0.00e+00	1264.00
IUUC-Ggo-044828	Gorilla gorilla	99.01	0.00e+00	1620.00
IUUC-Hsa-045664	Homo sapiens	99.01	0.00e+00	1619.00
IUUC-Lch-050508	Latimeria chalumnae	82.80	0.00e+00	1383.00
IUUC-Loc-052823	Lepisosteus oculatus	80.66	0.00e+00	1349.00
IUUC-Laf-054164	Loxodonta africana	90.25	0.00e+00	1392.00
IUUC-Mcc-055810	Macaca mulatta	96.84	0.00e+00	1558.00
IUUC-Mga-059405	Meleagris gallopavo	88.04	0.00e+00	1432.00
IUUC-Mmr-061144	Microcebus murinus	94.15	0.00e+00	1499.00
IUUC-Mdo-062834	Monodelphis domestica	88.97	0.00e+00	1465.00
IUUC-Mmu-063955	Mus musculus	93.72	0.00e+00	1485.00
IUUC-Mpu-066240	Mustela putorius furo	93.77	0.00e+00	1456.00
IUUC-Mlu-067847	Myotis lucifugus	92.47	0.00e+00	1085.00
IUUC-Nle-069783	Nomascus leucogenys	96.80	0.00e+00	1560.00
IUUC-Opr-070409	Ochotona princeps	86.44	0.00e+00	1348.00
IUUC-Ont-072468	Oreochromis niloticus	75.46	0.00e+00	1274.00
IUUC-Oan-073315	Ornithorhynchus anatinus	93.03	0.00e+00	1477.00
IUUC-Ocu-074604	Oryctolagus cuniculus	91.80	0.00e+00	1224.00
IUUC-Ola-086734	Oryzias latipes	73.96	0.00e+00	1246.00
IUUC-Oga-089105	Otolemur garnettii	96.92	0.00e+00	1527.00
IUUC-Oar-090057	Ovis aries	94.08	0.00e+00	1524.00
IUUC-Ptr-091138	Pan troglodytes	99.01	0.00e+00	1620.00
IUUC-Pan-092691	Papio anubis	92.36	0.00e+00	1455.00
IUUC-Psi-093076	Pelodiscus sinensis	92.02	0.00e+00	1484.00
IUUC-Pma-094555	Petromyzon marinus	57.97	0.00e+00	832.00
IUUC-Pfo-096794	Poecilia formosa	75.25	0.00e+00	1243.00
IUUC-Pab-097787	Pongo abelii	96.59	0.00e+00	1592.00
IUUC-Pva-102676	Pteropus vampyrus	93.60	0.00e+00	1474.00
IUUC-Rno-105971	Rattus norvegicus	83.82	0.00e+00	1274.00
IUUC-Sha-107530	Sarcophilus harrisii	92.04	0.00e+00	1456.00
IUUC-Ssc-116169	Sus scrofa	81.32	0.00e+00	1037.00
IUUC-Tgu-117046	Taeniopygia guttata	90.55	0.00e+00	1430.00
IUUC-Tru-118596	Takifugu rubripes	71.79	0.00e+00	1229.00
IUUC-Tsy-119142	Tarsius syrichta	93.35	0.00e+00	1118.00
IUUC-Tni-120377	Tetraodon nigroviridis	74.82	0.00e+00	1258.00
IUUC-Tbe-127916	Tupaia belangeri	73.21	0.00e+00	1074.00
IUUC-Ttr-129042	Tursiops truncatus	95.94	0.00e+00	1568.00
IUUC-Xtr-132117	Xenopus tropicalis	81.91	0.00e+00	1332.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence