iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093195

Ensembl Protein ID

ENSPSIP00000012813.1

UniProt Accession

K7FXQ3; K7FXQ3_PELSI

Genbank Protein ID

ENSPSIP00000012813

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01087101

Gene Name

RYBP

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000011534.1	ENSPSIT00000012874.1	ENSPSIP00000012813.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/ZnF/NZF	3.60e-14	52.0	25	54

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/ZnF/NZF

   S: 1    aeaqWaCsaCTflNePeavkCemCsrpRgc 30
           +e++W+Cs+CTf+N++ea+kC++C+ ++g+
   Q: 25   DEGFWDCSVCTFRNSAEAFKCSICDVRKGT 54
           589*************************95 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

GETRPLPSPV SFLPGPKRQA KPAADEGFWD CSVCTFRNSA EAFKCSICDV RKGTSTRKPR 60
INSQLVAQQV AQQYATPPPP KKEKKEKVEK QDKEKPDKEK EISPSVTKKN TNKKTKPKSD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCTCCCCAC CCCTCCAAAA AAGGAGGGTG AGGGGGGGAG ACGGGCGCCT CTTGTCTCTT 60
CCCCTCCCCT GCCCGAGTCT CTCCCTCCCA GGTTCACTGG GTAACCGCTG TTGTTTGTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome

Interpro

IPR033774--YAF2_RYBP
IPR001876--Znf_RanBP2

PROSITE

PS01358--ZF_RANBP2_1
PS50199--ZF_RANBP2_2

Pfam

PF17219--YAF2_RYBP
PF00641--zf-RanBP

SMART

SM00547--ZnF_RBZ

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0031519--C:PcG protein complex
GO:0003677--F:DNA binding
GO:0003714--F:transcription corepressor activity
GO:0008270--F:zinc ion binding
GO:0035518--P:histone H2A monoubiquitination
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002182	Ailuropoda melanoleuca	96.31	4.00e-60	224.00
IUUC-Apl-003475	Anas platyrhynchos	96.92	9.00e-63	232.00
IUUC-Aca-004725	Anolis carolinensis	96.77	2.00e-61	228.00
IUUC-Ame-011035	Astyanax mexicanus	87.50	2.00e-22	99.40
IUUC-Bta-012724	Bos taurus	94.66	2.00e-33	134.00
IUUC-Cja-019921	Callithrix jacchus	96.31	1.00e-60	225.00
IUUC-Cfa-020363	Canis familiaris	96.30	1.00e-59	222.00
IUUC-Cpo-022408	Cavia porcellus	95.42	6.00e-34	136.00
IUUC-Csa-023628	Chlorocebus sabaeus	96.31	9.00e-61	226.00
IUUC-Cho-024871	Choloepus hoffmanni	94.74	5.00e-37	145.00
IUUC-Cin-025723	Ciona intestinalis	71.43	1.00e-16	79.00
IUUC-Dre-028374	Danio rerio	93.75	4.00e-24	105.00
IUUC-Dno-029292	Dasypus novemcinctus	95.42	6.00e-34	136.00
IUUC-Dor-030691	Dipodomys ordii	95.42	6.00e-34	136.00
IUUC-Dme-031799	Drosophila melanogaster	80.85	5.00e-19	86.70
IUUC-Ete-032320	Echinops telfairi	95.39	8.00e-59	219.00
IUUC-Eca-034330	Equus caballus	96.31	1.00e-60	225.00
IUUC-Eeu-035193	Erinaceus europaeus	81.11	4.00e-41	160.00
IUUC-Fca-035645	Felis catus	95.42	6.00e-34	136.00
IUUC-Fal-036647	Ficedula albicollis	99.53	8.00e-61	226.00
IUUC-Gmo-038950	Gadus morhua	84.44	6.00e-21	93.20
IUUC-Gga-040262	Gallus gallus	99.54	1.00e-62	232.00
IUUC-Gac-041354	Gasterosteus aculeatus	91.53	4.00e-23	101.00
IUUC-Ggo-045026	Gorilla gorilla	95.42	6.00e-34	136.00
IUUC-Hsa-046566	Homo sapiens	96.31	1.00e-60	225.00
IUUC-Itr-048728	Ictidomys tridecemlineatus	93.89	8.00e-33	132.00
IUUC-Lch-050014	Latimeria chalumnae	84.07	3.00e-27	114.00
IUUC-Loc-051746	Lepisosteus oculatus	72.06	1.00e-62	232.00
IUUC-Laf-054352	Loxodonta africana	95.85	4.00e-59	220.00
IUUC-Mcc-055623	Macaca mulatta	96.31	7.00e-60	223.00
IUUC-Meu-056465	Macropus eugenii	83.33	5.00e-21	93.60
IUUC-Mpo-057432	Magnaporthe poae	40.91	1.80e-01	30.40
IUUC-Mga-059812	Meleagris gallopavo	99.24	5.00e-36	143.00
IUUC-Mvi-060474	Microbotryum violaceum	38.10	1.70e-02	33.50
IUUC-Mmr-061669	Microcebus murinus	93.13	8.00e-39	152.00
IUUC-Mdo-061964	Monodelphis domestica	94.71	1.00e-61	228.00
IUUC-Mmu-063177	Mus musculus	95.39	9.00e-61	226.00
IUUC-Mac-065491	Musa acuminata	42.86	9.00e-04	36.20
IUUC-Mpu-065711	Mustela putorius furo	96.31	1.00e-60	225.00
IUUC-Mlu-067973	Myotis lucifugus	96.39	7.00e-17	79.00
IUUC-Nle-069817	Nomascus leucogenys	95.02	7.00e-61	226.00
IUUC-Opr-070623	Ochotona princeps	95.42	6.00e-34	136.00
IUUC-Ont-071994	Oreochromis niloticus	62.31	3.00e-43	168.00
IUUC-Oan-072949	Ornithorhynchus anatinus	97.24	4.00e-61	227.00
IUUC-Ocu-074013	Oryctolagus cuniculus	95.79	2.00e-58	218.00
IUUC-Obr-076781	Oryza brachyantha	41.03	2.10e-02	33.10
IUUC-Ola-086923	Oryzias latipes	86.67	1.00e-20	92.40
IUUC-Oga-089162	Otolemur garnettii	56.63	1.00e-11	62.00
IUUC-Oar-090312	Ovis aries	94.66	2.00e-33	134.00
IUUC-Ptr-091316	Pan troglodytes	96.30	4.00e-59	221.00
IUUC-Pan-091877	Papio anubis	96.31	9.00e-61	226.00
IUUC-Pma-094646	Petromyzon marinus	83.33	4.00e-21	94.00
IUUC-Ppa-095919	Physcomitrella patens	33.33	4.00e-03	36.20
IUUC-Pfo-096909	Poecilia formosa	69.34	1.00e-24	106.00
IUUC-Pab-098578	Pongo abelii	96.30	2.00e-59	222.00
IUUC-Pca-100706	Procavia capensis	92.27	1.00e-39	155.00
IUUC-Pva-102682	Pteropus vampyrus	95.39	8.00e-58	216.00
IUUC-Rno-105156	Rattus norvegicus	95.39	1.00e-60	225.00
IUUC-Sha-107156	Sarcophilus harrisii	97.71	6.00e-35	140.00
IUUC-Sar-113234	Sorex araneus	91.16	2.00e-54	205.00
IUUC-Ssc-116262	Sus scrofa	95.42	6.00e-34	136.00
IUUC-Tgu-116730	Taeniopygia guttata	99.54	1.00e-62	232.00
IUUC-Tru-118642	Takifugu rubripes	91.53	1.00e-22	100.00
IUUC-Tsy-119328	Tarsius syrichta	95.42	6.00e-34	136.00
IUUC-Tni-120066	Tetraodon nigroviridis	57.09	6.00e-45	173.00
IUUC-Tre-121881	Trichoderma reesei	38.71	2.10e-02	33.50
IUUC-Tvi-122470	Trichoderma virens	44.83	3.00e-03	35.80
IUUC-Tbe-127332	Tupaia belangeri	96.77	6.00e-61	226.00
IUUC-Ttr-128963	Tursiops truncatus	96.31	1.00e-60	225.00
IUUC-Vda-130005	Verticillium dahliae	36.00	1.60e-01	30.40
IUUC-Vpa-130270	Vicugna pacos	93.80	2.00e-33	134.00
IUUC-Xtr-132256	Xenopus tropicalis	80.60	1.00e-30	126.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence