iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121079

Ensembl Protein ID

EOY12560

UniProt Accession

A0A061F5C2; A0A061F5C2_THECC

Genbank Protein ID

EOY12557.1; EOY12558.1; EOY12560.1; EOY28609.1

Protein Name

Polyubiquitin 10; Polyubiquitin 10 isoform 1

Genbank Nucleotide ID

CM001885; CM001885; CM001885; CM001884

Gene Name

TCM_030160; TCM_031075; TCM_031077

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_031077	EOY12560	EOY12560

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/NEDD8	1.40e-206	670.2	305	380
ULD/UDP/UBQ/UBQ_PIM	7.60e-141	459.3	305	377

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/NEDD8

   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           m+i+vktLtgk+i++e+e+sdti+++k+++++keGiPP+qqrli+aGkqled++t+adyn++k+s+LhLvL+LrGG
   Q: 305  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380
           89*************************************************************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++dt+ ++K+ki+++ g+pp+qq+LI+aGk+L+D +tL +++i+++s++hlv++ 
   Q: 305  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 377
           99********************************************************************986 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN 60
IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID NVKAKIQDKE GIPPDQQRLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGGCGTCTT GTTATTCGAT CCTGCATTTT CCTTTTTTTC TTCGTGAAGT CGGCAATCTC 60
AATCTCTCTC CCCCTATAAA TAAATCACCA TTTTCCCCTA ATTTTACCTA TCAAAGTTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM00213--UBQ

Gene Ontology

GO:0005737--C:cytoplasm

KEGG

tcc:TCM_031075; tcc:TCM_031077

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011696	Astyanax mexicanus	93.68	0.00e+00	705.00
IUUC-Dor-031044	Dipodomys ordii	94.96	5.00e-74	268.00
IUUC-Fal-036678	Ficedula albicollis	96.07	1.00e-168	584.00
IUUC-Hvu-047805	Hordeum vulgare	33.96	2.00e-39	155.00
IUUC-Mga-059240	Meleagris gallopavo	93.83	2.00e-85	306.00
IUUC-Opr-070947	Ochotona princeps	95.63	3.00e-125	439.00
IUUC-Olu-087888	Ostreococcus lucimarinus	100.00	0.00e+00	751.00
IUUC-Pop-099637	Populus trichocarpa	100.00	0.00e+00	753.00
IUUC-Sha-106780	Sarcophilus harrisii	95.07	7.00e-165	572.00
IUUC-Sja-107825	Schizosaccharomyces japonicus	97.11	0.00e+00	741.00
IUUC-Stu-112242	Solanum tuberosum	99.74	0.00e+00	754.00
IUUC-Vvi-131670	Vitis vinifera	100.00	0.00e+00	753.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence