iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tni-119822

Ensembl Protein ID

ENSTNIP00000007523.1

UniProt Accession

H3CGZ5; H3CGZ5_TETNG

Protein Name

Uncharacterized protein

Gene Name

LDB1 (1 of many)

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTNIG00000004861.1	ENSTNIT00000007683.1	ENSTNIP00000007523.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/U-box	61.50	8.00e-123	437.00	IUUC-Dme-031667

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Tetraodon nigroviridis

Protein Sequence
(Fasta)

RHTPYGNQSD YRIFELNKRL QNWTEECDNL WWDAFTTEFF EDDAMLTITF CLEDGPKRYT 60
IGRTLIPRYF RSIFEGGATE LYYVLKHPKE SFHNNFVSLD CDQCTMVTQN GKPMFTQVLC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGACACACAC CATATGGCAA CCAGAGCGAT TACAGAATAT TTGAGCTCAA CAAACGGCTA 60
CAGAACTGGA CGGAGGTTGG TGCCCCACCT GGAGCCAGAC TCCGCCTGCT GCCTGTCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR030167--LDB1
IPR029005--LIM-bd/SEUSS

Gene Ontology

GO:0005634--C:nucleus
GO:0000989--F:transcription factor activity, transcription factor binding
GO:0006357--P:regulation of transcription from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000177	Aegilops tauschii	25.87	2.00e-03	38.10
IUUC-Aml-002031	Ailuropoda melanoleuca	89.33	6.00e-173	600.00
IUUC-Atr-003083	Amborella trichopoda	21.74	1.00e-03	38.90
IUUC-Apl-004210	Anas platyrhynchos	95.85	2.00e-139	488.00
IUUC-Aca-005241	Anolis carolinensis	91.53	6.00e-179	619.00
IUUC-Aly-006204	Arabidopsis lyrata	23.98	7.00e-05	42.70
IUUC-Ath-007339	Arabidopsis thaliana	23.98	6.00e-05	43.10
IUUC-Ame-010910	Astyanax mexicanus	91.53	2.00e-178	617.00
IUUC-Bgr-012180	Blumeria graminis	21.74	1.00e-05	45.10
IUUC-Bta-012596	Bos taurus	72.03	9.00e-148	516.00
IUUC-Bci-013927	Botrytis cinerea	25.85	3.00e-06	47.00
IUUC-Bol-015721	Brassica oleracea	23.98	4.00e-05	43.50
IUUC-Bra-017183	Brassica rapa	23.98	3.00e-05	43.50
IUUC-Cel-018189	Caenorhabditis elegans	33.48	4.00e-27	115.00
IUUC-Cja-019586	Callithrix jacchus	74.08	3.00e-155	540.00
IUUC-Cfa-021188	Canis familiaris	89.33	2.00e-172	598.00
IUUC-Cpo-022350	Cavia porcellus	90.11	5.00e-175	606.00
IUUC-Csa-023816	Chlorocebus sabaeus	90.40	1.00e-176	612.00
IUUC-Cho-024958	Choloepus hoffmanni	61.50	2.00e-64	239.00
IUUC-Cin-025721	Ciona intestinalis	51.92	1.00e-85	309.00
IUUC-Csv-026065	Ciona savignyi	53.85	1.00e-89	322.00
IUUC-Dre-027356	Danio rerio	69.92	6.00e-146	509.00
IUUC-Dno-029918	Dasypus novemcinctus	90.21	4.00e-167	580.00
IUUC-Dor-030634	Dipodomys ordii	90.40	4.00e-177	613.00
IUUC-Dse-031245	Dothistroma septosporum	25.16	5.00e-04	39.70
IUUC-Dme-031667	Drosophila melanogaster	61.81	1.00e-119	423.00
IUUC-Ete-032246	Echinops telfairi	71.79	2.00e-150	525.00
IUUC-Eca-034015	Equus caballus	73.52	6.00e-154	536.00
IUUC-Eeu-034902	Erinaceus europaeus	90.40	4.00e-177	613.00
IUUC-Fca-035903	Felis catus	89.89	2.00e-175	608.00
IUUC-Fal-037407	Ficedula albicollis	75.07	1.00e-150	525.00
IUUC-Gmo-039466	Gadus morhua	95.34	0.00e+00	655.00
IUUC-Ggr-040030	Gaeumannomyces graminis	25.93	1.00e-02	35.40
IUUC-Gga-040214	Gallus gallus	90.96	4.00e-176	610.00
IUUC-Gac-042214	Gasterosteus aculeatus	94.29	0.00e+00	663.00
IUUC-Gma-042794	Glycine max	24.84	2.00e-06	47.80
IUUC-Ggo-044988	Gorilla gorilla	74.08	3.00e-155	541.00
IUUC-Hsa-046092	Homo sapiens	73.52	2.00e-152	531.00
IUUC-Itr-047934	Ictidomys tridecemlineatus	90.40	1.00e-176	612.00
IUUC-Lch-049895	Latimeria chalumnae	76.71	4.00e-95	340.00
IUUC-Lpe-050806	Leersia perrieri	27.43	1.00e-05	45.10
IUUC-Loc-052845	Lepisosteus oculatus	89.55	0.00e+00	632.00
IUUC-Lma-053090	Leptosphaeria maculans	22.56	1.80e-02	34.70
IUUC-Laf-054538	Loxodonta africana	89.89	1.00e-175	608.00
IUUC-Mcc-055116	Macaca mulatta	81.74	1.00e-117	415.00
IUUC-Meu-056777	Macropus eugenii	85.03	2.00e-162	564.00
IUUC-Mpo-057376	Magnaporthe poae	21.69	2.00e-03	37.70
IUUC-Mtr-058142	Medicago truncatula	24.84	2.00e-06	47.80
IUUC-Mga-059716	Meleagris gallopavo	74.50	1.00e-149	522.00
IUUC-Mmr-060649	Microcebus murinus	73.52	1.00e-153	535.00
IUUC-Mdo-062535	Monodelphis domestica	73.52	2.00e-154	538.00
IUUC-Mmu-064036	Mus musculus	72.80	9.00e-151	525.00
IUUC-Mac-065338	Musa acuminata	25.15	2.00e-05	44.70
IUUC-Mpu-065719	Mustela putorius furo	90.40	1.00e-176	612.00
IUUC-Mlu-067219	Myotis lucifugus	88.48	2.00e-171	594.00
IUUC-Ncr-068691	Neurospora crassa	22.22	6.00e-04	39.70
IUUC-Nle-068983	Nomascus leucogenys	74.08	8.00e-156	542.00
IUUC-Opr-070467	Ochotona princeps	90.40	4.00e-177	613.00
IUUC-Ont-071566	Oreochromis niloticus	91.81	0.00e+00	662.00
IUUC-Oan-073368	Ornithorhynchus anatinus	90.40	3.00e-177	613.00
IUUC-Ocu-074854	Oryctolagus cuniculus	74.08	3.00e-155	540.00
IUUC-Ome-081687	Oryza meridionalis	25.15	1.60e-02	34.30
IUUC-Ola-086364	Oryzias latipes	92.09	0.00e+00	658.00
IUUC-Oga-088235	Otolemur garnettii	73.24	2.00e-152	531.00
IUUC-Oar-089547	Ovis aries	89.33	9.00e-173	599.00
IUUC-Ptr-091423	Pan troglodytes	74.08	4.00e-155	540.00
IUUC-Pan-092378	Papio anubis	90.40	5.00e-177	613.00
IUUC-Psi-093638	Pelodiscus sinensis	73.52	2.00e-151	528.00
IUUC-Pma-094384	Petromyzon marinus	58.43	2.00e-46	177.00
IUUC-Pno-095027	Phaeosphaeria nodorum	19.55	4.00e-03	36.60
IUUC-Pfo-096031	Poecilia formosa	95.10	0.00e+00	669.00
IUUC-Pab-097886	Pongo abelii	74.08	8.00e-156	542.00
IUUC-Pop-099430	Populus trichocarpa	25.15	1.00e-05	45.10
IUUC-Pca-101138	Procavia capensis	90.40	4.00e-177	613.00
IUUC-Ppe-101293	Prunus persica	30.11	4.00e-06	46.60
IUUC-Pva-103215	Pteropus vampyrus	73.52	5.00e-154	536.00
IUUC-Pte-104238	Pyrenophora teres	25.64	2.00e-03	37.00
IUUC-Rno-105968	Rattus norvegicus	73.09	8.00e-152	529.00
IUUC-Sha-107595	Sarcophilus harrisii	90.11	3.00e-175	607.00
IUUC-Ssl-108527	Sclerotinia sclerotiorum	24.66	2.00e-05	44.30
IUUC-Smo-109552	Selaginella moellendorffii	18.13	9.80e-02	32.30
IUUC-Sly-110873	Solanum lycopersicum	27.05	6.00e-06	46.20
IUUC-Stu-112586	Solanum tuberosum	19.70	2.10e-02	34.30
IUUC-Sar-113076	Sorex araneus	74.35	4.00e-102	364.00
IUUC-Sre-115143	Sporisorium reilianum	18.63	3.20e-02	33.90
IUUC-Ssc-115755	Sus scrofa	89.83	3.00e-174	603.00
IUUC-Tgu-117326	Taeniopygia guttata	74.79	1.00e-149	522.00
IUUC-Tru-117858	Takifugu rubripes	72.32	7.00e-152	529.00
IUUC-Tsy-119296	Tarsius syrichta	67.04	2.00e-135	474.00
IUUC-Tca-120935	Theobroma cacao	30.11	3.00e-06	47.40
IUUC-Tbe-127366	Tupaia belangeri	89.27	3.00e-171	594.00
IUUC-Ttr-128484	Tursiops truncatus	73.33	1.00e-142	498.00
IUUC-Vpa-130304	Vicugna pacos	81.30	1.00e-116	412.00
IUUC-Vvi-131560	Vitis vinifera	30.11	8.00e-06	46.20
IUUC-Xtr-132062	Xenopus tropicalis	91.53	1.00e-177	615.00
IUUC-Xma-134288	Xiphophorus maculatus	92.66	0.00e+00	665.00
IUUC-Yli-134374	Yarrowia lipolytica	20.19	3.00e-06	46.60
IUUC-Zma-135310	Zea mays	25.68	5.00e-04	40.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence