iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-132792

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ring finger protein 183

Genbank Nucleotide ID

AAMC01107501

Gene Name

rnf183

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000023492.2	ENSXETT00000050700.2	ENSXETP00000050700.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.30e-07	31.4	13	58

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C++++   ++ p++l C+H+f+++Cl+++   ++ s  ++ CPlCr
   Q: 13   CPVCWNPYnptSRTPKLLHCNHCFCLECLERL---SQASPMRIPCPLCR 58
           ********888666***************999...88899999*****8 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MADAVKLDPD WDCPVCWNPY NPTSRTPKLL HCNHCFCLEC LERLSQASPM RIPCPLCRHP 60
TVLPEGQGVP ALPTHSAILS QVRAEQPTPR PFFCPKDSLK LPLFQRPPSI YTVSVGEEPG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGACG CGGTGAAACT GGACCCGGAC TGGGACTGCC CCGTCTGCTG GAACCCCTAC 60
AACCCCACGT CGCGCACCCC CAAACTGCTG CACTGCAACC ACTGCTTCTG CCTGGAGTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003890	Anas platyrhynchos	46.05	1.00e-13	68.90
IUUC-Ame-011796	Astyanax mexicanus	46.07	3.00e-15	75.10
IUUC-Bta-013148	Bos taurus	37.23	6.00e-12	63.90
IUUC-Cja-019712	Callithrix jacchus	47.89	1.00e-12	67.00
IUUC-Cfa-020515	Canis familiaris	45.07	1.00e-11	63.50
IUUC-Cpo-022176	Cavia porcellus	41.56	1.00e-11	63.20
IUUC-Csa-023128	Chlorocebus sabaeus	45.79	1.00e-36	145.00
IUUC-Dre-027991	Danio rerio	39.83	5.00e-15	73.90
IUUC-Dno-029116	Dasypus novemcinctus	44.21	8.00e-36	142.00
IUUC-Dor-031130	Dipodomys ordii	43.75	7.00e-31	126.00
IUUC-Eca-033747	Equus caballus	47.37	2.00e-39	154.00
IUUC-Gmo-038633	Gadus morhua	49.32	9.00e-13	64.70
IUUC-Gga-040232	Gallus gallus	44.74	4.00e-13	68.20
IUUC-Gac-042137	Gasterosteus aculeatus	45.33	8.00e-14	70.50
IUUC-Hsa-046242	Homo sapiens	45.07	2.00e-11	62.80
IUUC-Itr-048513	Ictidomys tridecemlineatus	44.74	3.00e-35	140.00
IUUC-Lch-049536	Latimeria chalumnae	42.93	1.00e-38	152.00
IUUC-Loc-052136	Lepisosteus oculatus	33.87	8.00e-21	93.20
IUUC-Laf-054336	Loxodonta africana	40.70	5.00e-12	64.70
IUUC-Mcc-054897	Macaca mulatta	45.79	2.00e-36	145.00
IUUC-Meu-056717	Macropus eugenii	45.21	2.00e-36	144.00
IUUC-Mga-060186	Meleagris gallopavo	45.45	4.00e-13	67.40
IUUC-Mmr-061396	Microcebus murinus	45.79	6.00e-34	136.00
IUUC-Mdo-062101	Monodelphis domestica	46.28	2.00e-37	147.00
IUUC-Mmu-063376	Mus musculus	40.48	6.00e-12	64.30
IUUC-Mpu-066249	Mustela putorius furo	40.70	3.00e-12	65.10
IUUC-Nle-069438	Nomascus leucogenys	45.07	2.00e-11	62.80
IUUC-Ont-071891	Oreochromis niloticus	33.93	6.00e-13	67.00
IUUC-Ocu-074595	Oryctolagus cuniculus	42.71	2.00e-28	118.00
IUUC-Osa-086244	Oryza sativa	44.12	1.00e-08	54.30
IUUC-Ola-086363	Oryzias latipes	38.67	8.00e-12	63.20
IUUC-Oga-089178	Otolemur garnettii	46.03	9.00e-28	116.00
IUUC-Pan-092010	Papio anubis	45.79	9.00e-37	145.00
IUUC-Psi-093722	Pelodiscus sinensis	41.01	2.00e-29	120.00
IUUC-Pfo-097099	Poecilia formosa	41.24	2.00e-15	75.90
IUUC-Pab-098138	Pongo abelii	45.07	1.00e-11	63.90
IUUC-Rno-105774	Rattus norvegicus	43.90	2.00e-11	63.20
IUUC-Sha-106674	Sarcophilus harrisii	40.96	6.00e-27	113.00
IUUC-Sar-113158	Sorex araneus	43.75	5.00e-29	120.00
IUUC-Ssc-115834	Sus scrofa	45.79	3.00e-31	127.00
IUUC-Tgu-117099	Taeniopygia guttata	45.95	1.00e-13	68.90
IUUC-Tru-118029	Takifugu rubripes	41.33	5.00e-12	65.10
IUUC-Tni-120086	Tetraodon nigroviridis	42.67	1.00e-12	66.60
IUUC-Tbe-128022	Tupaia belangeri	52.87	1.00e-14	71.20
IUUC-Ttr-128432	Tursiops truncatus	45.26	1.00e-24	105.00
IUUC-Vpa-130551	Vicugna pacos	46.32	3.00e-25	107.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence