iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
iRefIndex	PINA	Mentha
Post-translational Modifications (PTMs)
PHOSIDA
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/NEDD8	3.40e-286	924.4	457	532
ULD/UDP/UBQ/UBQ_PIM	3.70e-206	667.7	457	529

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/NEDD8

   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           m+i+vktLtgk+i++e+e+sdtie++k+++++keGiPP+qqrli+aGkqled++t++dyn++k+s+LhLvL+LrGG
   Q: 457  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
           89*************************************************************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++dt+e++K+ki+++ g+pp+qq+LI+aGk+L+D +tLs+++i+++s++hlv++ 
   Q: 457  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 529
           99********************************************************************986 PP

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MQIFVKTLTG KTITLEVEPS DTIENVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLSDYN 60
IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVEPSDTIE NVKAKIQDKE GIPPDQQRLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGTTAGAAT ACACACACAA ACGCATACAC TTCAACAGCT GAGATTAGTG TTGGAAAGAG 60
GGTCAGGCAA CTTATCGATA ACTCCGCTCT CTCGCTCACG AGAGCGAGCG AGATAAAAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM00213--UBQ

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005875--C:microtubule associated complex
GO:0005704--C:polytene chromosome band
GO:0031386--F:protein tag
GO:0006464--P:cellular protein modification process
GO:0016567--P:protein ubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

dme:Dmel_CG32744

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000772	Aegilops tauschii	46.59	7.00e-48	185.00
IUUC-Aml-001483	Ailuropoda melanoleuca	99.56	1.00e-129	454.00
IUUC-Apl-003614	Anas platyrhynchos	99.64	3.00e-157	546.00
IUUC-Aca-004901	Anolis carolinensis	99.74	0.00e+00	752.00
IUUC-Ago-007937	Ashbya gossypii	95.81	0.00e+00	727.00
IUUC-Acl-008108	Aspergillus clavatus	95.74	5.00e-168	582.00
IUUC-Afl-008740	Aspergillus flavus	96.05	1.00e-167	581.00
IUUC-Afu-009031	Aspergillus fumigatus	92.68	3.00e-165	573.00
IUUC-Ani-009444	Aspergillus nidulans	96.05	7.00e-167	578.00
IUUC-Aor-009964	Aspergillus oryzae	96.05	1.00e-167	581.00
IUUC-Ate-010298	Aspergillus terreus	96.05	1.00e-167	581.00
IUUC-Bta-012771	Bos taurus	99.67	3.00e-174	603.00
IUUC-Bci-013832	Botrytis cinerea	97.37	3.00e-169	586.00
IUUC-Bdi-015013	Brachypodium distachyon	96.05	0.00e+00	726.00
IUUC-Bra-017586	Brassica rapa	95.22	6.00e-125	438.00
IUUC-Cja-019812	Callithrix jacchus	99.74	0.00e+00	753.00
IUUC-Cre-022556	Chlamydomonas reinhardtii	97.37	2.00e-82	296.00
IUUC-Csa-024086	Chlorocebus sabaeus	100.00	3.00e-129	452.00
IUUC-Cin-025600	Ciona intestinalis	96.06	0.00e+00	730.00
IUUC-Cgl-026543	Colletotrichum gloeosporioides	96.05	1.00e-124	437.00
IUUC-Cne-026938	Cryptococcus neoformans	97.37	0.00e+00	877.00
IUUC-Dor-031044	Dipodomys ordii	100.00	2.00e-76	276.00
IUUC-Dse-031434	Dothistroma septosporum	96.05	1.00e-124	437.00
IUUC-Eca-033850	Equus caballus	99.56	1.00e-129	454.00
IUUC-Fca-036501	Felis catus	99.56	1.00e-129	454.00
IUUC-Fal-036678	Ficedula albicollis	99.67	6.00e-174	602.00
IUUC-Fox-037730	Fusarium oxysporum	95.61	3.00e-124	436.00
IUUC-Fso-038454	Fusarium solani	95.72	2.00e-167	580.00
IUUC-Ggr-040118	Gaeumannomyces graminis	96.05	9.00e-168	581.00
IUUC-Gga-041058	Gallus gallus	100.00	6.00e-174	602.00
IUUC-Hvu-047805	Hordeum vulgare	34.31	3.00e-39	154.00
IUUC-Itr-048563	Ictidomys tridecemlineatus	95.60	5.00e-45	170.00
IUUC-Kpa-049199	Komagataella pastoris	96.05	6.00e-168	582.00
IUUC-Mor-056991	Magnaporthe oryzae	96.05	9.00e-168	581.00
IUUC-Mpo-057384	Magnaporthe poae	96.05	9.00e-168	581.00
IUUC-Mtr-058675	Medicago truncatula	96.05	0.00e+00	1015.00
IUUC-Mga-059240	Meleagris gallopavo	98.14	5.00e-88	315.00
IUUC-Mmr-061259	Microcebus murinus	94.32	8.00e-119	418.00
IUUC-Mac-065145	Musa acuminata	86.18	9.00e-70	254.00
IUUC-Mpu-066106	Mustela putorius furo	83.61	7.00e-139	485.00
IUUC-Nfi-068475	Neosartorya fischeri	95.74	5.00e-168	582.00
IUUC-Opr-070947	Ochotona princeps	100.00	3.00e-129	452.00
IUUC-Oan-073470	Ornithorhynchus anatinus	99.74	0.00e+00	752.00
IUUC-Ocu-074508	Oryctolagus cuniculus	99.56	1.00e-129	454.00
IUUC-Oba-075152	Oryza barthii	34.29	2.00e-42	165.00
IUUC-Obr-076236	Oryza brachyantha	96.05	0.00e+00	871.00
IUUC-Ogl-077274	Oryza glaberrima	90.53	0.00e+00	672.00
IUUC-Oin-079920	Oryza indica	96.05	0.00e+00	1016.00
IUUC-Olo-080418	Oryza longistaminata	34.35	2.00e-30	125.00
IUUC-Ome-081397	Oryza meridionalis	33.97	9.00e-42	163.00
IUUC-Oni-082299	Oryza nivara	33.65	3.00e-41	161.00
IUUC-Oru-084544	Oryza rufipogon	78.95	3.00e-60	223.00
IUUC-Osa-085789	Oryza sativa	96.05	0.00e+00	1016.00
IUUC-Olu-087888	Ostreococcus lucimarinus	95.80	0.00e+00	728.00
IUUC-Oga-089171	Otolemur garnettii	99.35	8.00e-85	304.00
IUUC-Psi-093239	Pelodiscus sinensis	77.63	0.00e+00	648.00
IUUC-Pma-094556	Petromyzon marinus	99.01	0.00e+00	790.00
IUUC-Pno-095087	Phaeosphaeria nodorum	96.05	2.00e-124	436.00
IUUC-Ppa-095548	Physcomitrella patens	94.74	0.00e+00	1000.00
IUUC-Pfo-096371	Poecilia formosa	95.44	1.00e-130	457.00
IUUC-Pop-099396	Populus trichocarpa	96.05	0.00e+00	726.00
IUUC-Pca-100992	Procavia capensis	100.00	0.00e+00	687.00
IUUC-Ppe-102064	Prunus persica	95.84	0.00e+00	872.00
IUUC-Pva-102696	Pteropus vampyrus	99.56	1.00e-129	454.00
IUUC-Ptt-103710	Puccinia triticina	96.07	1.00e-168	584.00
IUUC-Pte-104277	Pyrenophora teres	96.05	1.00e-124	437.00
IUUC-Pyt-104779	Pyrenophora triticirepentis	96.05	1.00e-124	437.00
IUUC-Sja-107825	Schizosaccharomyces japonicus	96.05	0.00e+00	725.00
IUUC-Spo-108219	Schizosaccharomyces pombe	95.80	0.00e+00	725.00
IUUC-Ssl-108565	Sclerotinia sclerotiorum	97.04	2.00e-168	583.00
IUUC-Sit-109965	Setaria italica	96.05	0.00e+00	1016.00
IUUC-Sly-111224	Solanum lycopersicum	96.05	0.00e+00	1015.00
IUUC-Sbi-114776	Sorghum bicolor	95.98	0.00e+00	856.00
IUUC-Sre-115048	Sporisorium reilianum	97.40	7.00e-40	155.00
IUUC-Tgu-116620	Taeniopygia guttata	95.86	5.00e-155	539.00
IUUC-Tsy-119558	Tarsius syrichta	89.54	2.00e-74	270.00
IUUC-Tni-120338	Tetraodon nigroviridis	100.00	2.00e-84	303.00
IUUC-Tre-122012	Trichoderma reesei	96.05	9.00e-168	581.00
IUUC-Tvi-122369	Trichoderma virens	96.05	9.00e-168	581.00
IUUC-Tae-123654	Triticum aestivum	96.05	0.00e+00	871.00
IUUC-Tme-127032	Tuber melanosporum	95.42	3.00e-168	583.00
IUUC-Uma-129417	Ustilago maydis	97.37	0.00e+00	877.00
IUUC-Vda-129663	Verticillium dahliae	96.05	1.00e-124	437.00
IUUC-Yli-134420	Yarrowia lipolytica	96.05	0.00e+00	870.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence