iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-115992

Ensembl Protein ID

ENSSSCP00000020618.1

UniProt Accession

I3L9A6; I3L9A6_PIG

Protein Name

Uncharacterized protein

Gene Name

RAD18

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000026158.1	ENSSSCT00000024982.1	ENSSSCP00000020618.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/ZnF/UBZ	5.60e-08	33.2	157	180

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/ZnF/UBZ

   S: 1    llvCPvCqkmvdqtdfeeHlDeCl 24
           ++ CPvC+  ++++++++HlD+Cl
   Q: 157  KVDCPVCGVNIPENHINKHLDSCL 180
           689********************8 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

CSLCIRKFLS YKTQCTLCHV TVTEPDLKNN RVLDELVKSL NFARNHLLQF ALESPPVSPA 60
SSSSKNHAVK VQSTPVGFRH SLKKGSRLME NFLIRETGGS MSELLIKENE SKFSPLKELS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGTTCTCTTT GTATAAGAAA ATTTCTGTCC TATAAGACAC AATGTCCAAN NNNNNNNNNN 60
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR003034--SAP_dom
IPR006642--Znf_Rad18_put
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50800--SAP

Pfam

PF02037--SAP

SMART

SM00513--SAP
SM00734--ZnF_Rad18

Gene Ontology

GO:0005813--C:centrosome
GO:0016604--C:nuclear body
GO:0042405--C:nuclear inclusion body
GO:0005634--C:nucleus
GO:0097505--C:Rad6-Rad18 complex
GO:0005657--C:replication fork
GO:0035861--C:site of double-strand break
GO:0043142--F:single-stranded DNA-dependent ATPase activity
GO:0061630--F:ubiquitin protein ligase activity
GO:0000403--F:Y-form DNA binding
GO:0060548--P:negative regulation of cell death
GO:0051984--P:positive regulation of chromosome segregation
GO:0006301--P:postreplication repair
GO:0051865--P:protein autoubiquitination
GO:0006513--P:protein monoubiquitination
GO:0009411--P:response to UV

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002086	Ailuropoda melanoleuca	71.58	1.00e-165	576.00
IUUC-Apl-003657	Anas platyrhynchos	55.15	9.00e-89	320.00
IUUC-Aca-005369	Anolis carolinensis	71.13	1.00e-57	214.00
IUUC-Acl-008246	Aspergillus clavatus	29.89	4.00e-16	79.00
IUUC-Afl-008666	Aspergillus flavus	30.81	6.00e-14	71.60
IUUC-Afu-009052	Aspergillus fumigatus	28.83	5.00e-16	78.60
IUUC-Ani-009488	Aspergillus nidulans	24.18	1.00e-23	103.00
IUUC-Ang-009681	Aspergillus niger	23.39	2.00e-18	86.30
IUUC-Aor-010037	Aspergillus oryzae	26.30	2.00e-19	89.70
IUUC-Ame-010630	Astyanax mexicanus	39.57	5.00e-58	218.00
IUUC-Bgr-012178	Blumeria graminis	29.14	4.00e-17	82.00
IUUC-Bta-012976	Bos taurus	75.38	4.00e-132	464.00
IUUC-Bci-013680	Botrytis cinerea	28.14	2.00e-15	76.60
IUUC-Cja-019453	Callithrix jacchus	78.79	6.00e-158	550.00
IUUC-Cfa-020856	Canis familiaris	82.44	4.00e-166	577.00
IUUC-Cpo-021950	Cavia porcellus	74.55	6.00e-145	506.00
IUUC-Csa-023997	Chlorocebus sabaeus	80.25	1.00e-154	539.00
IUUC-Cho-024771	Choloepus hoffmanni	77.47	4.00e-70	258.00
IUUC-Csv-025884	Ciona savignyi	34.09	1.50e-01	31.60
IUUC-Cgl-026668	Colletotrichum gloeosporioides	26.86	3.00e-16	79.70
IUUC-Dre-028479	Danio rerio	43.27	1.00e-53	203.00
IUUC-Dno-028943	Dasypus novemcinctus	79.39	4.00e-153	534.00
IUUC-Dor-031046	Dipodomys ordii	69.15	1.00e-105	376.00
IUUC-Dse-031235	Dothistroma septosporum	27.37	8.00e-14	71.20
IUUC-Ete-032503	Echinops telfairi	75.39	3.00e-137	481.00
IUUC-Eca-033725	Equus caballus	86.51	5.00e-172	597.00
IUUC-Eeu-034573	Erinaceus europaeus	67.63	1.00e-84	306.00
IUUC-Fca-036495	Felis catus	75.57	8.00e-167	579.00
IUUC-Fal-036791	Ficedula albicollis	52.35	2.00e-72	266.00
IUUC-Fso-038144	Fusarium solani	30.95	3.00e-16	79.00
IUUC-Gmo-039152	Gadus morhua	44.03	2.00e-55	209.00
IUUC-Ggr-039737	Gaeumannomyces graminis	27.27	4.00e-14	72.40
IUUC-Gga-040788	Gallus gallus	51.23	5.00e-79	288.00
IUUC-Gac-041993	Gasterosteus aculeatus	41.38	4.00e-58	218.00
IUUC-Ggo-044889	Gorilla gorilla	79.44	1.00e-150	525.00
IUUC-Hsa-045957	Homo sapiens	79.80	2.00e-152	531.00
IUUC-Itr-048998	Ictidomys tridecemlineatus	76.96	5.00e-154	537.00
IUUC-Lch-050172	Latimeria chalumnae	50.37	2.00e-48	185.00
IUUC-Loc-052609	Lepisosteus oculatus	48.90	1.00e-65	243.00
IUUC-Laf-053889	Loxodonta africana	71.27	8.00e-139	486.00
IUUC-Mcc-055853	Macaca mulatta	80.05	3.00e-152	531.00
IUUC-Meu-056866	Macropus eugenii	52.89	2.00e-81	295.00
IUUC-Mor-057071	Magnaporthe oryzae	26.97	3.00e-22	99.40
IUUC-Mpo-057628	Magnaporthe poae	26.94	1.00e-14	74.30
IUUC-Mla-058953	Melampsora laricipopulina	28.49	6.00e-10	58.90
IUUC-Mga-059687	Meleagris gallopavo	50.76	1.00e-84	306.00
IUUC-Mmr-061563	Microcebus murinus	80.56	3.00e-158	551.00
IUUC-Mdo-062655	Monodelphis domestica	58.35	9.00e-102	363.00
IUUC-Mmu-063647	Mus musculus	65.98	1.00e-121	429.00
IUUC-Mpu-065778	Mustela putorius furo	83.72	4.00e-175	607.00
IUUC-Mlu-068205	Myotis lucifugus	77.61	8.00e-145	506.00
IUUC-Nfi-068501	Neosartorya fischeri	28.83	6.00e-16	78.20
IUUC-Ncr-068917	Neurospora crassa	28.79	2.00e-15	76.60
IUUC-Nle-068990	Nomascus leucogenys	80.26	3.00e-154	538.00
IUUC-Opr-071146	Ochotona princeps	70.99	6.00e-126	443.00
IUUC-Ont-071835	Oreochromis niloticus	41.71	3.00e-53	202.00
IUUC-Oan-072827	Ornithorhynchus anatinus	39.38	9.00e-25	106.00
IUUC-Ocu-073986	Oryctolagus cuniculus	72.77	2.00e-131	462.00
IUUC-Ola-086997	Oryzias latipes	40.46	3.00e-49	188.00
IUUC-Olu-087771	Ostreococcus lucimarinus	34.00	2.00e-10	59.70
IUUC-Oga-088092	Otolemur garnettii	80.35	2.00e-164	572.00
IUUC-Oar-089651	Ovis aries	83.67	1.00e-153	535.00
IUUC-Ptr-091103	Pan troglodytes	80.31	5.00e-153	533.00
IUUC-Pan-092478	Papio anubis	78.99	2.00e-151	528.00
IUUC-Psi-093356	Pelodiscus sinensis	56.62	3.00e-88	318.00
IUUC-Pfo-096663	Poecilia formosa	54.88	9.00e-45	174.00
IUUC-Pab-098515	Pongo abelii	80.56	1.00e-153	536.00
IUUC-Pca-100588	Procavia capensis	57.93	1.00e-95	342.00
IUUC-Pva-102377	Pteropus vampyrus	82.56	4.00e-162	564.00
IUUC-Pgr-103556	Puccinia graminis	25.71	9.00e-10	58.50
IUUC-Rno-105866	Rattus norvegicus	73.97	7.00e-134	470.00
IUUC-Sce-106454	Saccharomyces cerevisiae	28.30	2.00e-10	60.10
IUUC-Sha-107515	Sarcophilus harrisii	56.98	4.00e-97	347.00
IUUC-Sja-107689	Schizosaccharomyces japonicus	38.96	1.00e-12	67.00
IUUC-Spo-108248	Schizosaccharomyces pombe	29.93	7.00e-11	61.20
IUUC-Ssl-108430	Sclerotinia sclerotiorum	27.54	2.00e-14	73.60
IUUC-Sre-115123	Sporisorium reilianum	23.37	1.00e-12	67.40
IUUC-Tgu-117286	Taeniopygia guttata	50.83	7.00e-78	283.00
IUUC-Tru-117959	Takifugu rubripes	40.80	2.00e-51	196.00
IUUC-Tsy-119286	Tarsius syrichta	57.03	6.00e-104	370.00
IUUC-Tni-120570	Tetraodon nigroviridis	43.29	3.00e-53	201.00
IUUC-Tre-121893	Trichoderma reesei	25.48	6.00e-13	68.60
IUUC-Tvi-122405	Trichoderma virens	24.10	2.00e-19	89.70
IUUC-Tbe-127758	Tupaia belangeri	73.16	6.00e-61	228.00
IUUC-Ttr-128841	Tursiops truncatus	85.13	5.00e-160	556.00
IUUC-Vda-130021	Verticillium dahliae	31.97	5.00e-16	77.80
IUUC-Vpa-130169	Vicugna pacos	74.74	1.00e-126	446.00
IUUC-Xtr-132308	Xenopus tropicalis	49.85	2.00e-77	281.00
IUUC-Xma-133868	Xiphophorus maculatus	41.57	1.00e-46	180.00
IUUC-Yli-134474	Yarrowia lipolytica	29.41	9.00e-15	73.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence