iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017864

Ensembl Protein ID

Bra035572.1-P

UniProt Accession

M4F3C2; M4F3C2_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra035572	Bra035572.1	Bra035572.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.50e-08	35.7	350	385

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedek...slveCekCrewfHpaClkls 35
            C vC++g+ +++   ++ +C++C + +H +Cl ++
   Q: 350  KCSVCKNGEVKTDpdlQFAVCRRCPKSYHRKCLPRE 385
           6*******99988889****************9765 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MAFIDDDEEE DSVPQSATSY YFEDDDKEPV SFACLPIQWS HKEKVDGSAA GLYLRGTSDD 60
GLLPLHKLVK AWRFDLSNFE PEISVLTKDN VWIKLVKPRK SYAELIRTVL VTVHALQFLG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGTTTA TTGACGATGA TGAAGAGGAA GACTCTGTTC CTCAATCAGC CACCAGTTAC 60
TACTTCGAGG ATGACGATAA GGAACCTGTG TCATTCGCCT GCCTGCCAAT TCAGTGGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR022702--Cytosine_MeTrfase1_RFD
IPR032805--Wax_synthase_dom
IPR001965--Znf_PHD
IPR013083--Znf_RING/FYVE/PHD

Pfam

PF12047--DNMT1-RFD
PF13813--MBOAT_2

SMART

SM00249--PHD

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005634--C:nucleus
GO:0043565--F:sequence-specific DNA binding
GO:0003700--F:transcription factor activity, sequence-specific DNA binding
GO:0008270--F:zinc ion binding
GO:0050832--P:defense response to fungus
GO:0070829--P:heterochromatin maintenance
GO:0090436--P:leaf pavement cell development
GO:0031937--P:positive regulation of chromatin silencing
GO:0009911--P:positive regulation of flower development
GO:0061087--P:positive regulation of histone H3-K27 methylation
GO:1900111--P:positive regulation of histone H3-K9 dimethylation
GO:0044030--P:regulation of DNA methylation
GO:2000024--P:regulation of leaf development
GO:1900363--P:regulation of mRNA polyadenylation
GO:0007165--P:signal transduction
GO:0010228--P:vegetative to reproductive phase transition of meristem

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000732	Aegilops tauschii	27.07	7.00e-25	107.00
IUUC-Aml-001795	Ailuropoda melanoleuca	28.96	3.00e-15	79.00
IUUC-Atr-002482	Amborella trichopoda	48.23	0.00e+00	686.00
IUUC-Apl-003953	Anas platyrhynchos	28.02	6.00e-15	77.80
IUUC-Aca-004278	Anolis carolinensis	33.75	1.00e-16	82.00
IUUC-Aly-006105	Arabidopsis lyrata	72.04	0.00e+00	1758.00
IUUC-Ath-007426	Arabidopsis thaliana	71.70	0.00e+00	1710.00
IUUC-Ame-011499	Astyanax mexicanus	27.92	2.00e-11	63.50
IUUC-Bta-012966	Bos taurus	28.96	1.00e-15	80.10
IUUC-Bdi-014781	Brachypodium distachyon	48.21	1.00e-59	224.00
IUUC-Bol-016001	Brassica oleracea	94.41	0.00e+00	2419.00
IUUC-Cja-018780	Callithrix jacchus	28.96	1.00e-14	76.60
IUUC-Cfa-020975	Canis familiaris	28.96	4.00e-15	78.20
IUUC-Cpo-021331	Cavia porcellus	28.80	2.00e-14	75.90
IUUC-Csa-024226	Chlorocebus sabaeus	29.51	2.00e-15	79.30
IUUC-Cho-024405	Choloepus hoffmanni	30.08	3.00e-11	63.90
IUUC-Csv-026298	Ciona savignyi	28.49	4.00e-11	62.40
IUUC-Cgl-026461	Colletotrichum gloeosporioides	33.33	1.10e+00	28.10
IUUC-Dre-028152	Danio rerio	30.72	2.00e-15	79.00
IUUC-Dno-030020	Dasypus novemcinctus	30.62	8.00e-13	69.70
IUUC-Dor-031103	Dipodomys ordii	30.82	7.00e-13	70.10
IUUC-Ete-032488	Echinops telfairi	31.06	9.00e-12	66.20
IUUC-Eca-033591	Equus caballus	27.87	3.00e-14	75.10
IUUC-Fca-035791	Felis catus	29.17	3.00e-15	79.00
IUUC-Fal-037378	Ficedula albicollis	28.02	4.00e-15	78.60
IUUC-Gmo-038901	Gadus morhua	32.08	2.00e-14	74.70
IUUC-Gga-040881	Gallus gallus	28.02	4.00e-16	81.60
IUUC-Gma-044054	Glycine max	47.70	0.00e+00	780.00
IUUC-Ggo-044643	Gorilla gorilla	30.82	4.00e-13	70.90
IUUC-Hsa-046436	Homo sapiens	28.96	9.00e-15	77.00
IUUC-Itr-048194	Ictidomys tridecemlineatus	29.51	1.00e-15	80.10
IUUC-Lch-049684	Latimeria chalumnae	29.89	2.00e-15	79.00
IUUC-Lpe-051201	Leersia perrieri	43.36	3.00e-51	196.00
IUUC-Loc-052581	Lepisosteus oculatus	31.45	1.00e-17	83.20
IUUC-Laf-054046	Loxodonta africana	32.08	5.00e-15	77.80
IUUC-Mcc-055593	Macaca mulatta	29.51	2.00e-15	79.30
IUUC-Meu-056051	Macropus eugenii	32.09	3.00e-11	64.70
IUUC-Mga-059756	Meleagris gallopavo	28.02	2.00e-15	79.30
IUUC-Mmr-061182	Microcebus murinus	28.96	5.00e-15	78.20
IUUC-Mdo-062576	Monodelphis domestica	33.33	9.00e-15	76.30
IUUC-Mmu-063605	Mus musculus	28.96	1.00e-15	80.10
IUUC-Mpu-066446	Mustela putorius furo	28.96	4.00e-15	78.60
IUUC-Mlu-067261	Myotis lucifugus	28.42	5.00e-15	78.20
IUUC-Nle-069818	Nomascus leucogenys	28.96	8.00e-15	77.40
IUUC-Opr-070842	Ochotona princeps	30.72	3.00e-13	72.00
IUUC-Ont-072448	Oreochromis niloticus	30.82	2.00e-14	74.70
IUUC-Oan-073496	Ornithorhynchus anatinus	28.42	4.00e-14	74.70
IUUC-Ocu-074918	Oryctolagus cuniculus	28.96	8.00e-15	77.40
IUUC-Oba-075813	Oryza barthii	54.52	4.00e-99	357.00
IUUC-Obr-076122	Oryza brachyantha	45.98	1.00e-37	149.00
IUUC-Ogl-077641	Oryza glaberrima	47.09	2.00e-56	212.00
IUUC-Ogu-078898	Oryza glumaepatula	47.53	1.00e-56	213.00
IUUC-Oin-079557	Oryza indica	47.53	2.00e-56	212.00
IUUC-Olo-080581	Oryza longistaminata	37.50	2.00e-38	152.00
IUUC-Ome-081770	Oryza meridionalis	47.53	2.00e-56	212.00
IUUC-Oni-082657	Oryza nivara	47.53	1.00e-56	213.00
IUUC-Opu-083479	Oryza punctata	39.26	1.00e-42	166.00
IUUC-Oru-084464	Oryza rufipogon	47.53	2.00e-56	212.00
IUUC-Osa-085353	Oryza sativa	47.53	1.00e-56	213.00
IUUC-Ola-087085	Oryzias latipes	32.32	2.00e-13	71.60
IUUC-Oga-088743	Otolemur garnettii	29.51	2.00e-15	79.30
IUUC-Oar-090265	Ovis aries	29.17	8.00e-16	80.90
IUUC-Ptr-090521	Pan troglodytes	28.96	9.00e-15	77.40
IUUC-Pan-092291	Papio anubis	30.00	4.00e-12	67.40
IUUC-Psi-093245	Pelodiscus sinensis	32.08	6.00e-14	73.90
IUUC-Pma-094747	Petromyzon marinus	30.43	1.00e-11	65.90
IUUC-Pfo-096416	Poecilia formosa	31.45	4.00e-15	78.20
IUUC-Pab-098644	Pongo abelii	28.96	9.00e-15	77.00
IUUC-Pca-100273	Procavia capensis	30.82	2.00e-13	72.00
IUUC-Rno-105803	Rattus norvegicus	28.96	1.00e-15	80.10
IUUC-Sha-107278	Sarcophilus harrisii	24.35	2.00e-14	76.30
IUUC-Sly-111281	Solanum lycopersicum	43.82	5.00e-145	507.00
IUUC-Stu-112457	Solanum tuberosum	58.11	3.00e-50	191.00
IUUC-Sar-113547	Sorex araneus	31.88	4.00e-13	70.90
IUUC-Sbi-114581	Sorghum bicolor	41.62	2.00e-35	142.00
IUUC-Ssc-116193	Sus scrofa	28.96	6.00e-15	77.80
IUUC-Tgu-117006	Taeniopygia guttata	33.96	8.00e-15	76.60
IUUC-Tsy-118830	Tarsius syrichta	28.96	1.00e-14	76.60
IUUC-Tni-120509	Tetraodon nigroviridis	33.54	5.00e-14	73.90
IUUC-Tae-125914	Triticum aestivum	31.67	1.00e-28	119.00
IUUC-Tbe-127291	Tupaia belangeri	30.43	7.00e-12	66.60
IUUC-Ttr-128240	Tursiops truncatus	30.00	1.00e-11	65.90
IUUC-Xma-133695	Xiphophorus maculatus	34.38	1.00e-12	68.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence