iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093277

Ensembl Protein ID

ENSPSIP00000014971.1

UniProt Accession

K7G3W0; K7G3W0_PELSI

Genbank Protein ID

ENSPSIP00000014971

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01017635

Gene Name

USP42

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000013406.1	ENSPSIT00000015042.1	ENSPSIP00000014971.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	7.00e-85	285.2	111	410

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeq 89
           Gl+NlgNtC++NS+LQcL+ +p+l++++l+ +++++++     e+  ++++++q+ ++++++++ ++++p++++  l+++a++f+  +q
   Q: 111  GLQNLGNTCFLNSALQCLTYTPPLANYMLShEHSKTCH-----EHGFCMMCTMQSHITQVLSNSGNVIKPTAVIGDLRRIAKHFRFGNQ 194
           9*****************************34444443.....4689****************************************** PP
   S: 90   qDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpg 178
           +Da+Efl++ +d++++++                  l+ +++ + +++ ++li ++F+g l+s++kc +c+ vs +++p ld++l+++ 
   Q: 195  EDAHEFLHYTVDAMQKAC------------------LNGSNKLDRHTQATTLIYQIFGGYLRSRVKCMNCKGVSDTFDPCLDITLEIKA 265
           ******************..................3344567789999**************************************** PP
   S: 179  keetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfcts 267
            +     +l+++Le+f+k+e+l+gen+y+c+kckk + a+k+l++++ ++vL+l LkRf    ++ s  ki+k v++p+ Ld++p++++
   Q: 266  AQ-----NLNKALEQFVKPEQLDGENAYKCSKCKKMVPASKRLTIHRSSNVLTLSLKRF----SNFSGGKITKDVKYPEYLDIRPYMSQ 345
           **.....9***************************************************....457889******************** PP
   S: 268  peekqkekkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           p+ +   + +Y L+av+vH+G +++ GHY++y+k ++g+W++++Ds V+ ++ ++vl+   ++aYvlfY r
   Q: 346  PNGD---PIIYVLYAVLVHTGiNCHAGHYYCYIKASNGHWYQMNDSIVSNSDIKSVLN---QQAYVLFYIR 410
           9977...8**************************************************...********87 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

MTIVDKVSES SNSAACQKQP GSSTVPSSGD MDSASANWGA VSSLEAPKHK ITLGPVPGAA 60
VYSSSSVPDK SKPSAQKDQS FSDGIAPPQK ILFPAEKICL KWQQTHRVGA GLQNLGNTCF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACCATAG TTGACAAAGT ATCTGAGTCT TCAAACTCTG CAGCTTGTCA GAAGCAGCCT 60
GGTAGCTCCA CGGTACCTTC TTCTGGAGAT ATGGACTCGG CCTCTGCAAA TTGGGGTGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000401	Aegilops tauschii	38.91	1.00e-71	264.00
IUUC-Aml-002303	Ailuropoda melanoleuca	54.41	0.00e+00	960.00
IUUC-Atr-003102	Amborella trichopoda	47.88	3.00e-85	310.00
IUUC-Apl-003459	Anas platyrhynchos	53.40	0.00e+00	1059.00
IUUC-Aca-004440	Anolis carolinensis	59.27	0.00e+00	1302.00
IUUC-Aly-006389	Arabidopsis lyrata	42.63	3.00e-79	289.00
IUUC-Ath-006710	Arabidopsis thaliana	42.63	7.00e-79	288.00
IUUC-Ago-007836	Ashbya gossypii	27.73	2.00e-34	140.00
IUUC-Ame-011358	Astyanax mexicanus	67.92	0.00e+00	678.00
IUUC-Bta-012803	Bos taurus	54.92	0.00e+00	1126.00
IUUC-Bdi-014036	Brachypodium distachyon	45.28	3.00e-82	299.00
IUUC-Bol-015996	Brassica oleracea	42.06	2.00e-84	307.00
IUUC-Bra-016634	Brassica rapa	41.71	2.00e-84	306.00
IUUC-Cja-019199	Callithrix jacchus	70.13	0.00e+00	984.00
IUUC-Cfa-020597	Canis familiaris	58.55	0.00e+00	1197.00
IUUC-Cpo-021945	Cavia porcellus	54.50	0.00e+00	1123.00
IUUC-Cre-022988	Chlamydomonas reinhardtii	44.59	2.00e-49	188.00
IUUC-Csa-023485	Chlorocebus sabaeus	53.27	0.00e+00	1052.00
IUUC-Cho-024575	Choloepus hoffmanni	59.82	0.00e+00	753.00
IUUC-Cin-025230	Ciona intestinalis	60.55	6.00e-93	333.00
IUUC-Cne-027049	Cryptococcus neoformans	31.39	3.00e-39	156.00
IUUC-Cme-027339	Cyanidioschyzon merolae	36.89	4.00e-60	225.00
IUUC-Dre-028442	Danio rerio	60.81	0.00e+00	653.00
IUUC-Dno-029673	Dasypus novemcinctus	59.54	0.00e+00	1268.00
IUUC-Dor-030836	Dipodomys ordii	57.44	2.00e-119	423.00
IUUC-Dme-032119	Drosophila melanogaster	37.72	1.00e-62	235.00
IUUC-Ete-033088	Echinops telfairi	42.94	0.00e+00	696.00
IUUC-Eca-033579	Equus caballus	57.22	0.00e+00	1180.00
IUUC-Eeu-034511	Erinaceus europaeus	42.12	2.00e-135	477.00
IUUC-Fca-035792	Felis catus	54.82	0.00e+00	1084.00
IUUC-Fal-037075	Ficedula albicollis	55.17	0.00e+00	1191.00
IUUC-Gmo-039033	Gadus morhua	70.97	2.00e-158	552.00
IUUC-Gga-040504	Gallus gallus	54.89	0.00e+00	1140.00
IUUC-Gac-042176	Gasterosteus aculeatus	68.80	8.00e-159	554.00
IUUC-Gma-044075	Glycine max	48.21	5.00e-87	315.00
IUUC-Ggo-044798	Gorilla gorilla	49.96	0.00e+00	903.00
IUUC-Hsa-046072	Homo sapiens	69.07	0.00e+00	996.00
IUUC-Hvu-047620	Hordeum vulgare	43.08	3.00e-72	266.00
IUUC-Itr-048078	Ictidomys tridecemlineatus	57.58	0.00e+00	1285.00
IUUC-Lch-049867	Latimeria chalumnae	50.65	0.00e+00	1005.00
IUUC-Lpe-051574	Leersia perrieri	44.30	1.00e-75	277.00
IUUC-Loc-052621	Lepisosteus oculatus	64.15	0.00e+00	705.00
IUUC-Laf-054330	Loxodonta africana	73.94	0.00e+00	1029.00
IUUC-Mcc-054900	Macaca mulatta	78.48	0.00e+00	641.00
IUUC-Meu-056877	Macropus eugenii	53.46	0.00e+00	635.00
IUUC-Mtr-058537	Medicago truncatula	47.23	1.00e-84	307.00
IUUC-Mla-059049	Melampsora laricipopulina	41.30	4.00e-60	226.00
IUUC-Mga-059501	Meleagris gallopavo	49.40	0.00e+00	1007.00
IUUC-Mvi-060547	Microbotryum violaceum	40.82	1.00e-79	290.00
IUUC-Mmr-060864	Microcebus murinus	56.66	0.00e+00	1238.00
IUUC-Mdo-062395	Monodelphis domestica	66.28	0.00e+00	1520.00
IUUC-Mmu-064236	Mus musculus	52.17	0.00e+00	1068.00
IUUC-Mac-064815	Musa acuminata	47.88	2.00e-86	313.00
IUUC-Mpu-065822	Mustela putorius furo	56.64	0.00e+00	1193.00
IUUC-Mlu-067091	Myotis lucifugus	55.60	0.00e+00	1092.00
IUUC-Nle-069004	Nomascus leucogenys	54.14	0.00e+00	1058.00
IUUC-Opr-071170	Ochotona princeps	46.26	0.00e+00	761.00
IUUC-Ont-071832	Oreochromis niloticus	66.19	0.00e+00	655.00
IUUC-Oan-073711	Ornithorhynchus anatinus	63.99	0.00e+00	1369.00
IUUC-Ocu-074596	Oryctolagus cuniculus	77.99	0.00e+00	862.00
IUUC-Oba-075866	Oryza barthii	44.77	5.00e-81	295.00
IUUC-Obr-076408	Oryza brachyantha	44.30	5.00e-81	295.00
IUUC-Ogl-077239	Oryza glaberrima	44.95	1.00e-81	298.00
IUUC-Ogu-078064	Oryza glumaepatula	44.95	8.00e-82	298.00
IUUC-Oin-079157	Oryza indica	44.95	9.00e-82	298.00
IUUC-Olo-080231	Oryza longistaminata	43.32	1.00e-73	271.00
IUUC-Ome-081746	Oryza meridionalis	45.10	2.00e-81	296.00
IUUC-Oni-082339	Oryza nivara	44.95	1.00e-81	298.00
IUUC-Opu-083194	Oryza punctata	44.95	2.00e-81	298.00
IUUC-Oru-085083	Oryza rufipogon	44.95	9.00e-82	298.00
IUUC-Osa-086180	Oryza sativa	44.95	1.00e-81	298.00
IUUC-Ola-087255	Oryzias latipes	61.29	3.00e-161	562.00
IUUC-Olu-087773	Ostreococcus lucimarinus	43.49	1.00e-68	253.00
IUUC-Oga-088641	Otolemur garnettii	57.58	0.00e+00	1209.00
IUUC-Oar-089760	Ovis aries	52.75	0.00e+00	1063.00
IUUC-Ptr-091445	Pan troglodytes	60.00	0.00e+00	1003.00
IUUC-Pan-092484	Papio anubis	53.11	0.00e+00	1043.00
IUUC-Pma-094651	Petromyzon marinus	37.62	2.00e-54	205.00
IUUC-Ppa-095853	Physcomitrella patens	48.59	4.00e-93	336.00
IUUC-Pfo-096469	Poecilia formosa	63.77	0.00e+00	666.00
IUUC-Pab-097794	Pongo abelii	71.74	0.00e+00	931.00
IUUC-Pop-099693	Populus trichocarpa	45.69	5.00e-82	299.00
IUUC-Pca-100117	Procavia capensis	53.63	7.00e-88	318.00
IUUC-Ppe-101678	Prunus persica	45.60	5.00e-82	299.00
IUUC-Pva-103238	Pteropus vampyrus	52.34	0.00e+00	992.00
IUUC-Pgr-103270	Puccinia graminis	41.77	2.00e-65	243.00
IUUC-Ptt-103887	Puccinia triticina	40.73	1.00e-64	240.00
IUUC-Rno-105068	Rattus norvegicus	52.51	0.00e+00	1090.00
IUUC-Sha-106713	Sarcophilus harrisii	65.21	0.00e+00	1495.00
IUUC-Sja-107805	Schizosaccharomyces japonicus	40.06	5.00e-73	268.00
IUUC-Spo-108119	Schizosaccharomyces pombe	44.44	7.00e-85	307.00
IUUC-Smo-108763	Selaginella moellendorffii	49.03	2.00e-82	298.00
IUUC-Sit-109895	Setaria italica	44.95	7.00e-83	301.00
IUUC-Sly-111722	Solanum lycopersicum	45.60	2.00e-80	293.00
IUUC-Stu-112912	Solanum tuberosum	45.28	1.00e-79	290.00
IUUC-Sar-113340	Sorex araneus	66.76	0.00e+00	887.00
IUUC-Sbi-114477	Sorghum bicolor	43.28	4.00e-84	306.00
IUUC-Sre-114924	Sporisorium reilianum	39.52	4.00e-63	236.00
IUUC-Ssc-116022	Sus scrofa	71.56	1.00e-150	527.00
IUUC-Tgu-117149	Taeniopygia guttata	53.72	0.00e+00	1139.00
IUUC-Tru-117776	Takifugu rubripes	65.70	2.00e-177	616.00
IUUC-Tsy-118974	Tarsius syrichta	54.64	0.00e+00	1150.00
IUUC-Tni-120774	Tetraodon nigroviridis	67.56	6.00e-175	606.00
IUUC-Tca-120936	Theobroma cacao	42.22	3.00e-85	309.00
IUUC-Tae-125416	Triticum aestivum	45.78	3.00e-83	303.00
IUUC-Tur-126014	Triticum urartu	45.10	7.00e-79	288.00
IUUC-Tbe-128006	Tupaia belangeri	69.06	6.00e-96	345.00
IUUC-Ttr-128764	Tursiops truncatus	48.86	0.00e+00	921.00
IUUC-Uma-129416	Ustilago maydis	40.12	3.00e-64	239.00
IUUC-Vpa-130568	Vicugna pacos	62.39	1.00e-40	161.00
IUUC-Vvi-131535	Vitis vinifera	46.35	6.00e-87	315.00
IUUC-Xtr-132544	Xenopus tropicalis	59.10	0.00e+00	666.00
IUUC-Xma-133131	Xiphophorus maculatus	64.70	0.00e+00	659.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence