iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-007510

UUCD1 version

UUC-ArT-01500

Ensembl Protein ID

AT1G74370.1

UniProt Accession

Q9CA76; Q9CA76_ARATH

Genbank Protein ID

AAG52370.1; AAY57590.1; ABD19666.1; AEE35583.1; BAF00447.1

Protein Name

At1g74370; Putative RING zinc finger protein; Putative RING zinc finger protein; 15305-14520; RING finger family protein; RING/U-box superfamily protein

Genbank Nucleotide ID

AC011765; DQ059104; BT024485; CP002684; AK228525

Gene Name

At1g74370; F1M20.5; F1M20_5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT1G74370	AT1G74370.1	AT1G74370.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
HINT
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/RING	RING	16339806

Classification

Family	E-value	Score	Start	End
E3 activity/RING/RING	7.40e-07	30.5	46	102

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadCl...qkw.....pglknssskefr.........CPlCr 46
           C+iC+e+f   ++ p+vl CgH++++ Cl   q+                 +         CP+C+
   Q: 46   CPICWESFnvvENVPYVLWCGHTICKYCLlglQRAiviksSA---------LpfqlpffvaCPWCN 102
           ********999889**************95543334443333.........2333555555****7 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MWNLASKSIR EGFISKGEEA ATKPRRATLD RSGDGRKTTK EEKLECPICW ESFNVVENVP 60
YVLWCGHTIC KYCLLGLQRA IVIKSSALPF QLPFFVACPW CNILSLRLVC NGTIRFPSKN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGAAACGGA TAAGGTGAGG AAATCGGTGG GGGCGGCGGA AACATTGAAA GGCGTTTCAG 60
AGTCACCATG TTTTACGACG CGTGTCTCTT TTTCAGCCGG TTTTCTTCTC GCTGGTTACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13445--zf-RING_UBOX

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

ath:AT1G74370

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003290	Anas platyrhynchos	44.68	1.00e-05	45.10
IUUC-Aly-006116	Arabidopsis lyrata	90.00	6.00e-136	475.00
IUUC-Bol-015127	Brassica oleracea	76.25	3.00e-110	390.00
IUUC-Bra-016897	Brassica rapa	73.85	4.00e-108	383.00
IUUC-Dme-031708	Drosophila melanogaster	52.94	2.00e-05	43.90
IUUC-Eeu-035091	Erinaceus europaeus	44.68	1.00e-05	45.10
IUUC-Mdo-063035	Monodelphis domestica	44.68	1.00e-05	45.10
IUUC-Mlu-068023	Myotis lucifugus	44.68	1.00e-05	45.10
IUUC-Opr-070587	Ochotona princeps	44.68	1.00e-05	45.10
IUUC-Ola-086665	Oryzias latipes	44.90	3.00e-05	44.30
IUUC-Pva-102431	Pteropus vampyrus	44.68	1.00e-05	45.10
IUUC-Smo-109392	Selaginella moellendorffii	38.50	2.00e-32	131.00
IUUC-Sar-113722	Sorex araneus	44.68	1.00e-05	45.10
IUUC-Tru-118270	Takifugu rubripes	45.28	3.00e-06	47.00
IUUC-Tbe-127445	Tupaia belangeri	44.68	1.00e-05	45.10
IUUC-Vpa-130054	Vicugna pacos	44.68	1.00e-05	45.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence