iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pab-098067

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABGA01225587

Gene Name

CDRT1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPPYG00000008006.2	ENSPPYT00000009368.1	ENSPPYP00000009002.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-27	94.0	493	530
UBD/Beta-Prp	7.00e-41	140.4	418	686

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsd.tllvsGsdDgtikvWDlrtgvllks 38
           gH++ +tc+++ + ++lvsG++D+++kvWD++tg++lk+
   Q: 493  GHQGTITCMDL-CkNRLVSGGRDCQVKVWDVDTGKCLKT 530
           8**********.4489********************986 PP

UBD/Beta-Prp

   S: 16   vkfspdksllatgsrdgtikvwdvttgkll.rslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfs 103
           +++  +++l+a++s +++i + d+ + k++  ++ gh + v+a+ + +++++l++gs D  i+ wdl++g c++++ gh+ ++++++++
   Q: 418  IHY-SGGDLIAVSS-NRKIHLLDIIQVKAIpVEFRGHAGSVRALFLCEEENFLLSGSYDLSIRYWDLKSGACTRIFGGHQGTITCMDLC 504
           455.6778888887.***********99962567******************************************************* PP
   S: 104  psgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsng 192
           +  ++lvsG++d  ++vwd++tg+cl+ t+  h++ +  +++++   ++vs++  ++v++W +++++l++tl g h+++v++l fd+  
   Q: 505  K--NRLVSGGRDCQVKVWDVDTGKCLK-TF-RHKDPILATRIND--TYIVSSCERGVVKVWHIAMAQLVKTLNG-HEGAVKCLFFDQ-- 584
           *..***********************9.55.5777888889988..***************************9.************.. PP
   S: 193  kelvsgsldgtvklwdlq..tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnv 279
            +l+sgs+dg v  w++    ++c+ +++ h + v++v ++    r++s+ +Dg iri++  +g+++k+++  n +  +v  + +++n 
   Q: 585  WHLLSGSTDGLVMAWSMVgkYERCLIAFK-HPKEVLDVSLL--FLRVISACADGKIRIYNFLNGNCMKVIKA-NGRGDPVLSFFIQGNR 669
           8****************875555555555.55556666666..699************************99.5455555555668888 PP
   S: 280  lvlgsedskvniwklkkn 297
           +v  +e s+v +++++ +
   Q: 670  MVVNTE-SNVLMFQFEHI 686
           888777.67888887665 PP

Organism

Pongo abelii

Protein Sequence
(Fasta)

MENLESRLKN APYFHCEKGT DSIPLCQKCE TCVLAWKIFS TKEWFCRIND ISQRRFLVGI 60
LKQLNSLYLL HYFQNILQTT QGKDFIYSRS RIDLSKKEGK VVKSSLNQML DETVEQKMKE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAAACC TGGAATCAAG GCTCAAGAAT GCCCCCTATT TTCATTGTGA GAAGGGAACT 60
GATTCCATCC CTCTATGCCA GAAGTGTGAG ACGTGTGTCT TAGCCTGGAA GATCTTCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001810--F-box_dom
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001837	Ailuropoda melanoleuca	75.17	0.00e+00	683.00
IUUC-Apl-003572	Anas platyrhynchos	39.07	6.00e-158	551.00
IUUC-Aca-004297	Anolis carolinensis	44.68	9.00e-172	597.00
IUUC-Ame-011058	Astyanax mexicanus	39.12	3.00e-141	495.00
IUUC-Bta-012667	Bos taurus	74.56	0.00e+00	729.00
IUUC-Cja-019163	Callithrix jacchus	84.74	0.00e+00	1823.00
IUUC-Cfa-020784	Canis familiaris	76.56	0.00e+00	1634.00
IUUC-Cpo-021429	Cavia porcellus	75.45	0.00e+00	724.00
IUUC-Csa-023597	Chlorocebus sabaeus	94.02	0.00e+00	1330.00
IUUC-Cho-024559	Choloepus hoffmanni	63.35	0.00e+00	650.00
IUUC-Dre-027496	Danio rerio	44.96	9.00e-113	400.00
IUUC-Dno-028995	Dasypus novemcinctus	75.78	0.00e+00	1575.00
IUUC-Ete-032823	Echinops telfairi	77.84	2.00e-90	327.00
IUUC-Eca-033666	Equus caballus	76.12	0.00e+00	1353.00
IUUC-Eeu-035054	Erinaceus europaeus	70.68	3.00e-97	349.00
IUUC-Fca-035589	Felis catus	70.77	0.00e+00	1484.00
IUUC-Fal-037403	Ficedula albicollis	37.07	1.00e-139	490.00
IUUC-Gmo-038669	Gadus morhua	32.56	4.00e-72	265.00
IUUC-Gga-041227	Gallus gallus	40.02	6.00e-158	551.00
IUUC-Hsa-046221	Homo sapiens	96.10	0.00e+00	2075.00
IUUC-Itr-049011	Ictidomys tridecemlineatus	74.55	0.00e+00	1568.00
IUUC-Lch-050046	Latimeria chalumnae	36.04	0.00e+00	680.00
IUUC-Loc-052366	Lepisosteus oculatus	42.65	9.00e-160	557.00
IUUC-Laf-053745	Loxodonta africana	73.64	0.00e+00	1582.00
IUUC-Mcc-054826	Macaca mulatta	93.73	0.00e+00	1992.00
IUUC-Meu-056636	Macropus eugenii	47.50	1.00e-55	211.00
IUUC-Mga-060185	Meleagris gallopavo	39.15	6.00e-153	534.00
IUUC-Mdo-062382	Monodelphis domestica	53.39	0.00e+00	712.00
IUUC-Mmu-063623	Mus musculus	68.66	0.00e+00	1421.00
IUUC-Mpu-066872	Mustela putorius furo	69.22	0.00e+00	1273.00
IUUC-Mlu-067552	Myotis lucifugus	71.09	0.00e+00	651.00
IUUC-Nle-069247	Nomascus leucogenys	95.53	0.00e+00	1489.00
IUUC-Opr-070455	Ochotona princeps	76.22	0.00e+00	741.00
IUUC-Ont-071926	Oreochromis niloticus	35.23	1.00e-97	350.00
IUUC-Oan-073411	Ornithorhynchus anatinus	43.41	0.00e+00	815.00
IUUC-Ocu-073893	Oryctolagus cuniculus	74.21	0.00e+00	1322.00
IUUC-Oga-087937	Otolemur garnettii	78.08	0.00e+00	758.00
IUUC-Oar-089680	Ovis aries	68.32	0.00e+00	1469.00
IUUC-Ptr-091549	Pan troglodytes	91.35	0.00e+00	1942.00
IUUC-Pan-091904	Papio anubis	91.63	0.00e+00	1938.00
IUUC-Psi-093181	Pelodiscus sinensis	42.01	0.00e+00	814.00
IUUC-Pma-094711	Petromyzon marinus	42.95	7.00e-72	263.00
IUUC-Pca-100867	Procavia capensis	70.73	0.00e+00	826.00
IUUC-Pva-102209	Pteropus vampyrus	77.40	0.00e+00	1120.00
IUUC-Rno-105374	Rattus norvegicus	63.25	0.00e+00	1296.00
IUUC-Sha-107459	Sarcophilus harrisii	48.88	2.00e-111	395.00
IUUC-Tgu-117261	Taeniopygia guttata	42.82	3.00e-102	365.00
IUUC-Tru-117705	Takifugu rubripes	45.28	2.00e-41	160.00
IUUC-Tni-120365	Tetraodon nigroviridis	47.06	5.00e-40	157.00
IUUC-Tbe-128015	Tupaia belangeri	67.51	0.00e+00	1064.00
IUUC-Ttr-128654	Tursiops truncatus	72.04	0.00e+00	1040.00
IUUC-Vpa-130176	Vicugna pacos	65.47	0.00e+00	904.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence