iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAF	PhosphositePlus
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	1.00e-21	77.3	16	96

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 1    tvrvkvsykgeirsfaldlekpgkfedLlkavrtltelknsevalkYeDedGDlvtlksDedldkavsllaskksllrlliqkk 84
           t++vk+++++e+r+f+l+++kpgkfe+++ +++++++++n +v ++Y+D +GDl+++++D++++kavs   ++++llr++iqkk
   Q: 16   TMEVKSKFGAEFRRFSLERSKPGKFEEFYGLLQHVHKIPNVDVLVGYADIHGDLLPINNDDNYHKAVS---TANPLLRVFIQKK 96
           589*****************************************************************...9*********986 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MNRGHRHGVS SGCLGTMEVK SKFGAEFRRF SLERSKPGKF EEFYGLLQHV HKIPNVDVLV 60
GYADIHGDLL PINNDDNYHK AVSTANPLLR VFIQKKEEAD YSAFGTDTLI RKKNVLSNVL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGCCGCCGC CGCCTCCGAG CCTCGCTGGG AGGGACCCGT GTCCCCGCCT GCCGCACTGC 60
CAGTCCGACC CTCAGGCCGC CACGGAGCAG CGGGCACAGC GCTGCGCGGA CCTTAGCAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR000270--PB1_dom
IPR001478--PDZ

PROSITE

PS51745--PB1
PS50106--PDZ

Pfam

PF00564--PB1
PF00595--PDZ

SMART

SM00666--PB1
SM00228--PDZ

Gene Ontology

GO:0016324--C:apical plasma membrane
GO:0005923--C:bicellular tight junction
GO:0005938--C:cell cortex
GO:0005829--C:cytosol
GO:0070062--C:extracellular exosome
GO:0005634--C:nucleus
GO:0043234--C:protein complex
GO:0006461--P:protein complex assembly

KEGG

rno:362279

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000216	Aegilops tauschii	29.09	7.50e-02	30.40
IUUC-Aml-002050	Ailuropoda melanoleuca	90.59	0.00e+00	646.00
IUUC-Apl-003829	Anas platyrhynchos	79.68	4.00e-153	533.00
IUUC-Aca-004451	Anolis carolinensis	82.30	1.00e-126	445.00
IUUC-Ame-011428	Astyanax mexicanus	81.10	1.00e-120	426.00
IUUC-Bta-013165	Bos taurus	83.38	6.00e-172	596.00
IUUC-Cja-018719	Callithrix jacchus	90.32	0.00e+00	660.00
IUUC-Cfa-020802	Canis familiaris	76.68	3.00e-147	514.00
IUUC-Cpo-021864	Cavia porcellus	90.00	2.00e-173	600.00
IUUC-Csa-023766	Chlorocebus sabaeus	90.59	0.00e+00	649.00
IUUC-Cho-024608	Choloepus hoffmanni	86.56	0.00e+00	627.00
IUUC-Dre-028158	Danio rerio	60.91	3.00e-117	415.00
IUUC-Dno-030052	Dasypus novemcinctus	89.78	0.00e+00	638.00
IUUC-Dor-030924	Dipodomys ordii	85.22	7.00e-173	599.00
IUUC-Ete-032876	Echinops telfairi	76.08	8.00e-147	513.00
IUUC-Eca-033894	Equus caballus	90.00	3.00e-175	607.00
IUUC-Eeu-034442	Erinaceus europaeus	83.60	3.00e-167	580.00
IUUC-Fca-035602	Felis catus	92.00	4.00e-177	613.00
IUUC-Fal-037422	Ficedula albicollis	83.14	7.00e-143	499.00
IUUC-Gga-040289	Gallus gallus	81.99	6.00e-152	530.00
IUUC-Gac-041720	Gasterosteus aculeatus	85.36	1.00e-117	416.00
IUUC-Ggo-045502	Gorilla gorilla	91.40	0.00e+00	659.00
IUUC-Hsa-046189	Homo sapiens	91.40	0.00e+00	659.00
IUUC-Itr-048930	Ictidomys tridecemlineatus	92.00	1.00e-178	618.00
IUUC-Kpa-049339	Komagataella pastoris	32.69	1.70e+00	27.70
IUUC-Lch-050235	Latimeria chalumnae	74.47	2.00e-143	501.00
IUUC-Loc-052534	Lepisosteus oculatus	70.05	2.00e-135	475.00
IUUC-Laf-053439	Loxodonta africana	89.25	0.00e+00	642.00
IUUC-Mcc-054945	Macaca mulatta	89.28	0.00e+00	637.00
IUUC-Meu-056703	Macropus eugenii	85.14	3.00e-164	571.00
IUUC-Mor-057134	Magnaporthe oryzae	32.93	7.90e-02	30.80
IUUC-Mga-059330	Meleagris gallopavo	81.64	1.00e-142	499.00
IUUC-Mmr-060844	Microcebus murinus	91.45	1.00e-177	615.00
IUUC-Mdo-062120	Monodelphis domestica	85.48	1.00e-177	615.00
IUUC-Mmu-064360	Mus musculus	95.97	0.00e+00	630.00
IUUC-Mpu-066914	Mustela putorius furo	90.29	3.00e-173	600.00
IUUC-Mlu-067135	Myotis lucifugus	90.29	7.00e-176	609.00
IUUC-Nle-069266	Nomascus leucogenys	91.67	0.00e+00	659.00
IUUC-Ont-071750	Oreochromis niloticus	82.63	3.00e-124	438.00
IUUC-Oan-073082	Ornithorhynchus anatinus	87.29	5.00e-171	593.00
IUUC-Ocu-074563	Oryctolagus cuniculus	88.47	4.00e-179	620.00
IUUC-Ola-086459	Oryzias latipes	62.28	3.00e-123	434.00
IUUC-Oga-089180	Otolemur garnettii	90.86	0.00e+00	652.00
IUUC-Oar-089284	Ovis aries	85.09	6.00e-156	543.00
IUUC-Ptr-090918	Pan troglodytes	91.40	0.00e+00	654.00
IUUC-Pan-092624	Papio anubis	90.59	0.00e+00	649.00
IUUC-Psi-093544	Pelodiscus sinensis	79.41	7.00e-153	533.00
IUUC-Pfo-097463	Poecilia formosa	81.89	1.00e-119	422.00
IUUC-Pab-097846	Pongo abelii	91.40	0.00e+00	659.00
IUUC-Pva-103173	Pteropus vampyrus	88.98	0.00e+00	644.00
IUUC-Sha-106608	Sarcophilus harrisii	85.75	6.00e-177	613.00
IUUC-Ssc-115788	Sus scrofa	91.13	0.00e+00	661.00
IUUC-Tgu-117327	Taeniopygia guttata	81.99	1.00e-148	518.00
IUUC-Tru-117906	Takifugu rubripes	78.12	4.00e-115	407.00
IUUC-Tsy-119156	Tarsius syrichta	87.43	3.00e-172	597.00
IUUC-Tbe-127604	Tupaia belangeri	88.29	6.00e-169	586.00
IUUC-Ttr-128716	Tursiops truncatus	90.59	0.00e+00	650.00
IUUC-Vpa-130278	Vicugna pacos	91.40	0.00e+00	652.00
IUUC-Xtr-132550	Xenopus tropicalis	74.67	4.00e-139	487.00
IUUC-Xma-133768	Xiphophorus maculatus	82.24	2.00e-122	432.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence