iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oba-075963

Ensembl Protein ID

OBART04G23590.1

UniProt Accession

A0A0D3FZK8; A0A0D3FZK8_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OBART04G23590	OBART04G23590.1	OBART04G23590.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-58	193.2	407	443
UBD/Beta-Prp	2.40e-105	353.0	467	675

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf....sd.tllvsGsdDgtikvWDlrt 32
           gHt+ v c++     s+ tl+v+Gs D t+++WD+ +
   Q: 407  GHTEIVVCIDTcissSGkTLVVTGSKDSTVRLWDMER 443
           8*******97568976799***************865 PP

UBD/Beta-Prp

   S: 64   gkilvtgseDrtikvwdls..........tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhp 147
           ++++v+gs+Drtik+w+ +            k   ++ +h++++ sls+sp++  + sGs+drt+ +w+l++   +  +l+gh++ +++v+++p
   Q: 467  KNFFVSGSSDRTIKIWSWDdtlddvgsevPLKAKAVVAAHDKDINSLSVSPNDGLVCSGSEDRTACIWKLPNLVSSV-VLKGHKRGIWSVEFSP 559
           579*************777777788888766677777799*************************************.**************** PP
   S: 148  dgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgs 241
            +++++++s Drtv++W ++ g++l+t++g ht+sv   sf s g+++vs++ dg vklw ++t+ec+ t+  h+  v+ +++ +++e l++g+
   Q: 560  VEQCVITSSGDRTVKIWAVADGSCLKTFEG-HTSSVLRASFLSHGTQFVSCGSDGLVKLWTIKTNECIATYDKHDGKVWALAVGKKTEMLATGG 652
           *****************************9.*************************************************************** PP
   S: 242  sDgsiriW.dlrsgdllktlqlh 263
            D ++++W d++  d    + ++
   Q: 653  TDAVLNLWhDCTMEDKQEDFRKK 675
           ********999888877766665 PP

Organism

Oryza barthii

Protein Sequence
(Fasta)

MASSQGLKKN YRCDRSLQQF YTGGPFAVGS SPGGGEGEVE GGEAEAEAFL ACACGGEVRL 60
VSAADASAIG EPIEGENEAV TALALSPDSR LLFTAGHSRL IRVWDLASRT CTRSWKGHDG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTTCGT CGCAGGGCCT CAAGAAGAAC TACCGCTGCG ACCGCTCGCT GCAGCAGTTC 60
TACACGGGCG GGCCGTTCGC CGTCGGGAGC TCTCCCGGAG GCGGCGAAGG CGAAGTCGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011044--Quino_amine_DH_bsu
IPR011047--Quinoprotein_ADH-like_supfam
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0051301--P:cell division
GO:0009793--P:embryo development ending in seed dormancy
GO:0009880--P:embryonic pattern specification
GO:0006364--P:rRNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	79.48	0.00e+00	1332.00
IUUC-Aml-002376	Ailuropoda melanoleuca	37.65	3.00e-157	548.00
IUUC-Atr-002486	Amborella trichopoda	63.77	0.00e+00	1089.00
IUUC-Apl-003519	Anas platyrhynchos	33.80	9.00e-122	430.00
IUUC-Aca-004363	Anolis carolinensis	33.97	1.00e-73	269.00
IUUC-Aly-006152	Arabidopsis lyrata	63.56	0.00e+00	1065.00
IUUC-Ath-006966	Arabidopsis thaliana	63.30	0.00e+00	1068.00
IUUC-Ago-007746	Ashbya gossypii	30.71	9.00e-106	377.00
IUUC-Acl-008009	Aspergillus clavatus	28.92	3.00e-103	369.00
IUUC-Afl-008681	Aspergillus flavus	30.31	9.00e-101	360.00
IUUC-Afu-008798	Aspergillus fumigatus	28.84	8.00e-98	351.00
IUUC-Ani-009278	Aspergillus nidulans	29.43	3.00e-111	395.00
IUUC-Ang-009640	Aspergillus niger	31.52	5.00e-111	394.00
IUUC-Aor-010160	Aspergillus oryzae	30.37	5.00e-100	358.00
IUUC-Ate-010320	Aspergillus terreus	29.97	6.00e-109	388.00
IUUC-Ame-010930	Astyanax mexicanus	35.21	1.00e-37	149.00
IUUC-Bgr-012054	Blumeria graminis	30.36	1.00e-98	353.00
IUUC-Bta-012611	Bos taurus	37.64	2.00e-151	529.00
IUUC-Bci-013797	Botrytis cinerea	28.93	2.00e-105	376.00
IUUC-Bdi-014384	Brachypodium distachyon	85.43	0.00e+00	1490.00
IUUC-Bol-016483	Brassica oleracea	62.40	0.00e+00	1059.00
IUUC-Bra-017798	Brassica rapa	62.16	0.00e+00	1039.00
IUUC-Cel-018664	Caenorhabditis elegans	28.40	2.00e-92	333.00
IUUC-Cja-019092	Callithrix jacchus	37.99	2.00e-158	552.00
IUUC-Cfa-021040	Canis familiaris	36.89	6.00e-155	540.00
IUUC-Cpo-022529	Cavia porcellus	37.03	6.00e-150	524.00
IUUC-Cre-022986	Chlamydomonas reinhardtii	55.47	4.00e-48	182.00
IUUC-Csa-024205	Chlorocebus sabaeus	37.99	4.00e-159	554.00
IUUC-Cin-025560	Ciona intestinalis	36.11	5.00e-148	517.00
IUUC-Cgl-026481	Colletotrichum gloeosporioides	30.55	1.00e-116	413.00
IUUC-Cne-027082	Cryptococcus neoformans	30.53	1.00e-116	414.00
IUUC-Cme-027159	Cyanidioschyzon merolae	24.96	4.00e-36	146.00
IUUC-Dre-028138	Danio rerio	36.60	8.00e-155	540.00
IUUC-Dno-029914	Dasypus novemcinctus	35.37	4.00e-104	371.00
IUUC-Dor-030685	Dipodomys ordii	40.40	1.00e-104	374.00
IUUC-Dse-031429	Dothistroma septosporum	29.61	1.00e-109	390.00
IUUC-Dme-031995	Drosophila melanogaster	29.99	4.00e-92	332.00
IUUC-Ete-033086	Echinops telfairi	40.90	3.00e-94	338.00
IUUC-Eca-034354	Equus caballus	37.52	7.00e-149	520.00
IUUC-Eeu-034832	Erinaceus europaeus	38.93	6.00e-90	324.00
IUUC-Fca-036136	Felis catus	33.37	8.00e-126	444.00
IUUC-Fal-036859	Ficedula albicollis	38.30	5.00e-161	560.00
IUUC-Fox-037863	Fusarium oxysporum	30.50	4.00e-105	375.00
IUUC-Fso-038389	Fusarium solani	29.10	3.00e-112	399.00
IUUC-Gmo-038711	Gadus morhua	34.62	5.00e-138	484.00
IUUC-Ggr-039820	Gaeumannomyces graminis	28.31	3.00e-103	369.00
IUUC-Gga-040263	Gallus gallus	37.70	6.00e-160	557.00
IUUC-Gac-041291	Gasterosteus aculeatus	37.15	2.00e-161	562.00
IUUC-Gma-044026	Glycine max	65.58	0.00e+00	1119.00
IUUC-Ggo-044693	Gorilla gorilla	37.73	1.00e-155	543.00
IUUC-Hsa-046048	Homo sapiens	37.85	3.00e-155	541.00
IUUC-Hvu-047608	Hordeum vulgare	84.89	0.00e+00	1468.00
IUUC-Itr-048391	Ictidomys tridecemlineatus	37.55	1.00e-162	566.00
IUUC-Kpa-049209	Komagataella pastoris	30.89	1.00e-112	400.00
IUUC-Lch-050085	Latimeria chalumnae	37.20	6.00e-148	517.00
IUUC-Lpe-050945	Leersia perrieri	89.28	0.00e+00	1491.00
IUUC-Loc-052679	Lepisosteus oculatus	37.62	5.00e-172	597.00
IUUC-Laf-053685	Loxodonta africana	36.87	4.00e-145	508.00
IUUC-Mcc-055861	Macaca mulatta	37.74	2.00e-154	539.00
IUUC-Meu-056820	Macropus eugenii	34.83	2.00e-114	405.00
IUUC-Mor-057234	Magnaporthe oryzae	29.94	1.00e-99	357.00
IUUC-Mpo-057456	Magnaporthe poae	28.14	1.00e-76	280.00
IUUC-Mtr-058122	Medicago truncatula	63.16	0.00e+00	1096.00
IUUC-Mla-058980	Melampsora laricipopulina	29.86	6.00e-88	318.00
IUUC-Mga-060080	Meleagris gallopavo	36.35	7.00e-158	550.00
IUUC-Mvi-060338	Microbotryum violaceum	35.90	5.00e-145	508.00
IUUC-Mmr-060762	Microcebus murinus	37.24	9.00e-154	536.00
IUUC-Mdo-061975	Monodelphis domestica	38.41	2.00e-153	535.00
IUUC-Mmu-064038	Mus musculus	37.96	5.00e-156	544.00
IUUC-Mac-065189	Musa acuminata	68.36	0.00e+00	1198.00
IUUC-Mpu-066526	Mustela putorius furo	37.88	9.00e-152	530.00
IUUC-Mlu-067716	Myotis lucifugus	37.71	5.00e-166	577.00
IUUC-Nfi-068474	Neosartorya fischeri	29.12	1.00e-102	367.00
IUUC-Ncr-068826	Neurospora crassa	27.57	4.00e-97	348.00
IUUC-Nle-069832	Nomascus leucogenys	37.74	4.00e-158	551.00
IUUC-Opr-071183	Ochotona princeps	37.72	2.00e-148	518.00
IUUC-Ont-072371	Oreochromis niloticus	37.88	2.00e-165	575.00
IUUC-Oan-073491	Ornithorhynchus anatinus	36.79	1.00e-128	453.00
IUUC-Obr-076173	Oryza brachyantha	92.41	0.00e+00	1528.00
IUUC-Ogl-077692	Oryza glaberrima	99.78	0.00e+00	1676.00
IUUC-Ogu-078965	Oryza glumaepatula	99.89	0.00e+00	1686.00
IUUC-Oin-079708	Oryza indica	99.55	0.00e+00	1679.00
IUUC-Olo-080679	Oryza longistaminata	98.20	0.00e+00	1653.00
IUUC-Oni-082960	Oryza nivara	99.44	0.00e+00	1678.00
IUUC-Opu-083282	Oryza punctata	95.29	0.00e+00	1612.00
IUUC-Oru-085224	Oryza rufipogon	99.78	0.00e+00	1682.00
IUUC-Osa-085320	Oryza sativa	99.78	0.00e+00	1682.00
IUUC-Ola-086370	Oryzias latipes	31.57	1.00e-73	270.00
IUUC-Olu-087814	Ostreococcus lucimarinus	35.99	3.00e-129	455.00
IUUC-Oga-088458	Otolemur garnettii	37.27	7.00e-162	563.00
IUUC-Oar-090032	Ovis aries	36.40	8.00e-115	407.00
IUUC-Ptr-090749	Pan troglodytes	37.48	4.00e-155	541.00
IUUC-Pan-091691	Papio anubis	36.65	4.00e-145	508.00
IUUC-Psi-093200	Pelodiscus sinensis	36.58	4.00e-158	551.00
IUUC-Pma-094165	Petromyzon marinus	36.48	4.00e-112	398.00
IUUC-Pno-095048	Phaeosphaeria nodorum	31.06	6.00e-93	334.00
IUUC-Ppa-095336	Physcomitrella patens	52.00	0.00e+00	862.00
IUUC-Pfo-096132	Poecilia formosa	39.47	3.00e-161	561.00
IUUC-Pab-097855	Pongo abelii	37.38	9.00e-158	550.00
IUUC-Pop-099434	Populus trichocarpa	61.89	0.00e+00	1051.00
IUUC-Pca-100232	Procavia capensis	35.78	5.00e-55	208.00
IUUC-Ppe-101665	Prunus persica	62.08	0.00e+00	1087.00
IUUC-Pva-102178	Pteropus vampyrus	37.70	7.00e-158	550.00
IUUC-Pgr-103288	Puccinia graminis	29.37	1.00e-88	320.00
IUUC-Ptt-103808	Puccinia triticina	31.41	1.00e-84	306.00
IUUC-Pte-104205	Pyrenophora teres	31.57	9.00e-110	390.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	32.10	2.00e-100	359.00
IUUC-Rno-105617	Rattus norvegicus	38.61	3.00e-158	551.00
IUUC-Sce-106281	Saccharomyces cerevisiae	30.17	2.00e-104	373.00
IUUC-Sha-107378	Sarcophilus harrisii	38.30	3.00e-154	538.00
IUUC-Sja-107718	Schizosaccharomyces japonicus	32.17	3.00e-115	409.00
IUUC-Spo-108361	Schizosaccharomyces pombe	33.05	3.00e-123	435.00
IUUC-Ssl-108592	Sclerotinia sclerotiorum	29.90	6.00e-111	394.00
IUUC-Smo-109257	Selaginella moellendorffii	53.35	0.00e+00	884.00
IUUC-Sit-110258	Setaria italica	85.71	0.00e+00	1496.00
IUUC-Sly-111521	Solanum lycopersicum	62.24	0.00e+00	1068.00
IUUC-Stu-112718	Solanum tuberosum	70.07	3.00e-52	196.00
IUUC-Sar-113586	Sorex araneus	45.14	3.00e-26	112.00
IUUC-Sbi-114768	Sorghum bicolor	85.33	0.00e+00	1484.00
IUUC-Sre-115159	Sporisorium reilianum	32.68	8.00e-95	341.00
IUUC-Ssc-116342	Sus scrofa	29.62	2.00e-70	259.00
IUUC-Tgu-117320	Taeniopygia guttata	37.58	2.00e-149	521.00
IUUC-Tru-118024	Takifugu rubripes	37.39	4.00e-158	551.00
IUUC-Tni-119971	Tetraodon nigroviridis	37.83	3.00e-162	565.00
IUUC-Tca-121248	Theobroma cacao	67.60	0.00e+00	1087.00
IUUC-Tre-122079	Trichoderma reesei	28.69	3.00e-108	385.00
IUUC-Tvi-122554	Trichoderma virens	28.50	1.00e-107	383.00
IUUC-Tae-123690	Triticum aestivum	86.20	0.00e+00	1486.00
IUUC-Tur-126436	Triticum urartu	79.89	0.00e+00	1188.00
IUUC-Tme-126942	Tuber melanosporum	33.30	9.00e-117	414.00
IUUC-Ttr-128964	Tursiops truncatus	36.66	5.00e-153	534.00
IUUC-Uma-129473	Ustilago maydis	30.75	4.00e-99	355.00
IUUC-Vda-129749	Verticillium dahliae	29.25	2.00e-102	366.00
IUUC-Vvi-131511	Vitis vinifera	65.57	0.00e+00	1093.00
IUUC-Xtr-132816	Xenopus tropicalis	33.21	3.00e-130	458.00
IUUC-Xma-133672	Xiphophorus maculatus	39.30	2.00e-165	575.00
IUUC-Yli-134602	Yarrowia lipolytica	36.10	9.00e-139	486.00
IUUC-Zma-135559	Zea mays	81.07	0.00e+00	1432.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence