iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pab-098450

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABGA01258547

Gene Name

UBR4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPPYG00000001797.2	ENSPPYT00000002146.2	ENSPPYP00000002083.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/N-recognin/UBR-box	98.35	0.00e+00	9614.00	IUUC-Hsa-046955

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Pongo abelii

Protein Sequence
(Fasta)

MATSGGEEAA AAAPAPGTPA TGADTTPGWE VAVRPLLSAS YSAFEMKELP QLVASVIESE 60
SEILHHEKQY EPFYSSFVAL STHYITTVCS LIPRNQLQSV AAACKVLIEF SLLRLENPDE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGACGA GCGGCGGCGA AGAGGCGGCG GCAGCGGCTC CAGCGCCCGG GACCCCGGCA 60
ACGGGGGCGG ACACGACCCC GGGCTGGGAG GTGGCTGTGC GGCCCCTGCT GTCCGCGTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR016024--ARM-type_fold
IPR025704--E3_Ub_ligase_UBR4
IPR015943--WD40/YVTN_repeat-like_dom
IPR017986--WD40_repeat_dom
IPR003126--Znf_UBR

PROSITE

PS51157--ZF_UBR

Pfam

PF13764--E3_UbLigase_R4
PF02207--zf-UBR

SMART

SM00396--ZnF_UBR1

Gene Ontology

GO:0005813--C:centrosome
GO:0005829--C:cytosol
GO:0016020--C:membrane
GO:0005654--C:nucleoplasm
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000915	Aegilops tauschii	31.56	0.00e+00	948.00
IUUC-Aml-001346	Ailuropoda melanoleuca	96.78	0.00e+00	9479.00
IUUC-Atr-002587	Amborella trichopoda	35.17	2.00e-147	518.00
IUUC-Apl-003678	Anas platyrhynchos	89.92	0.00e+00	5542.00
IUUC-Aca-004517	Anolis carolinensis	91.54	0.00e+00	933.00
IUUC-Aly-006117	Arabidopsis lyrata	32.31	0.00e+00	876.00
IUUC-Ath-007289	Arabidopsis thaliana	31.45	0.00e+00	875.00
IUUC-Ame-011965	Astyanax mexicanus	81.51	0.00e+00	4692.00
IUUC-Bta-012498	Bos taurus	95.66	0.00e+00	9355.00
IUUC-Bdi-014555	Brachypodium distachyon	30.69	0.00e+00	947.00
IUUC-Bol-015522	Brassica oleracea	31.42	0.00e+00	899.00
IUUC-Bra-017090	Brassica rapa	31.43	0.00e+00	832.00
IUUC-Cel-018504	Caenorhabditis elegans	26.94	6.00e-157	549.00
IUUC-Cja-018983	Callithrix jacchus	98.00	0.00e+00	9596.00
IUUC-Cfa-020612	Canis familiaris	96.94	0.00e+00	9525.00
IUUC-Cpo-021700	Cavia porcellus	96.57	0.00e+00	9498.00
IUUC-Csa-023771	Chlorocebus sabaeus	98.23	0.00e+00	9570.00
IUUC-Cho-024474	Choloepus hoffmanni	89.06	0.00e+00	4685.00
IUUC-Cin-025247	Ciona intestinalis	58.16	0.00e+00	1037.00
IUUC-Csv-026255	Ciona savignyi	58.13	0.00e+00	1063.00
IUUC-Dre-028796	Danio rerio	83.14	0.00e+00	5024.00
IUUC-Dno-030056	Dasypus novemcinctus	96.42	0.00e+00	9467.00
IUUC-Dor-030711	Dipodomys ordii	92.97	0.00e+00	6780.00
IUUC-Dme-032113	Drosophila melanogaster	43.95	0.00e+00	1922.00
IUUC-Ete-032334	Echinops telfairi	87.50	0.00e+00	4686.00
IUUC-Eca-033327	Equus caballus	96.99	0.00e+00	9539.00
IUUC-Eeu-034698	Erinaceus europaeus	85.75	0.00e+00	1220.00
IUUC-Fca-035430	Felis catus	96.26	0.00e+00	9375.00
IUUC-Fal-037566	Ficedula albicollis	89.34	0.00e+00	5486.00
IUUC-Gmo-038674	Gadus morhua	82.70	0.00e+00	7943.00
IUUC-Ggr-039732	Gaeumannomyces graminis	42.86	2.50e-01	30.00
IUUC-Gga-040641	Gallus gallus	91.66	0.00e+00	9119.00
IUUC-Gac-041870	Gasterosteus aculeatus	83.13	0.00e+00	8239.00
IUUC-Gma-042722	Glycine max	31.05	0.00e+00	915.00
IUUC-Ggo-045360	Gorilla gorilla	98.05	0.00e+00	9614.00
IUUC-Hsa-046955	Homo sapiens	98.35	0.00e+00	9616.00
IUUC-Hvu-047255	Hordeum vulgare	31.51	0.00e+00	944.00
IUUC-Itr-048714	Ictidomys tridecemlineatus	95.81	0.00e+00	3932.00
IUUC-Lch-049893	Latimeria chalumnae	79.53	0.00e+00	4864.00
IUUC-Lpe-050948	Leersia perrieri	31.25	0.00e+00	870.00
IUUC-Loc-052019	Lepisosteus oculatus	82.71	0.00e+00	8108.00
IUUC-Laf-054238	Loxodonta africana	96.22	0.00e+00	9412.00
IUUC-Mcc-054905	Macaca mulatta	98.22	0.00e+00	9600.00
IUUC-Meu-056297	Macropus eugenii	86.60	0.00e+00	8388.00
IUUC-Mtr-058169	Medicago truncatula	31.91	0.00e+00	916.00
IUUC-Mga-059621	Meleagris gallopavo	91.02	0.00e+00	9085.00
IUUC-Mmr-061395	Microcebus murinus	99.40	0.00e+00	3006.00
IUUC-Mdo-063037	Monodelphis domestica	90.05	0.00e+00	4495.00
IUUC-Mmu-063200	Mus musculus	95.72	0.00e+00	9324.00
IUUC-Mac-065267	Musa acuminata	30.82	0.00e+00	855.00
IUUC-Mpu-066639	Mustela putorius furo	97.03	0.00e+00	9503.00
IUUC-Mlu-067172	Myotis lucifugus	96.03	0.00e+00	9498.00
IUUC-Nle-069162	Nomascus leucogenys	98.21	0.00e+00	8371.00
IUUC-Opr-070567	Ochotona princeps	91.32	0.00e+00	3396.00
IUUC-Ont-072364	Oreochromis niloticus	80.84	0.00e+00	4899.00
IUUC-Oan-072804	Ornithorhynchus anatinus	82.54	0.00e+00	1962.00
IUUC-Ocu-074637	Oryctolagus cuniculus	96.48	0.00e+00	9482.00
IUUC-Oba-075215	Oryza barthii	34.25	0.00e+00	830.00
IUUC-Obr-076704	Oryza brachyantha	31.79	0.00e+00	920.00
IUUC-Ogl-077593	Oryza glaberrima	36.08	0.00e+00	652.00
IUUC-Ogu-078732	Oryza glumaepatula	31.37	0.00e+00	872.00
IUUC-Oin-079805	Oryza indica	32.74	0.00e+00	738.00
IUUC-Olo-080261	Oryza longistaminata	34.30	0.00e+00	834.00
IUUC-Ome-081392	Oryza meridionalis	33.91	0.00e+00	871.00
IUUC-Oni-082086	Oryza nivara	34.02	0.00e+00	834.00
IUUC-Opu-083535	Oryza punctata	34.08	0.00e+00	837.00
IUUC-Oru-084735	Oryza rufipogon	34.02	0.00e+00	833.00
IUUC-Ola-086799	Oryzias latipes	83.03	0.00e+00	8155.00
IUUC-Olu-087777	Ostreococcus lucimarinus	27.28	1.00e-85	313.00
IUUC-Oga-088126	Otolemur garnettii	95.72	0.00e+00	1557.00
IUUC-Oar-090428	Ovis aries	94.29	0.00e+00	9170.00
IUUC-Ptr-091407	Pan troglodytes	98.45	0.00e+00	9628.00
IUUC-Pan-091777	Papio anubis	97.75	0.00e+00	9592.00
IUUC-Psi-093587	Pelodiscus sinensis	91.26	0.00e+00	9156.00
IUUC-Ppa-095781	Physcomitrella patens	31.91	0.00e+00	952.00
IUUC-Pfo-097449	Poecilia formosa	83.23	0.00e+00	8266.00
IUUC-Pop-100041	Populus trichocarpa	31.90	0.00e+00	882.00
IUUC-Pca-100663	Procavia capensis	90.73	0.00e+00	2872.00
IUUC-Ppe-101386	Prunus persica	32.35	0.00e+00	828.00
IUUC-Pva-102701	Pteropus vampyrus	95.26	0.00e+00	3957.00
IUUC-Ptt-103987	Puccinia triticina	23.66	6.00e-03	33.90
IUUC-Rno-105367	Rattus norvegicus	94.25	0.00e+00	5669.00
IUUC-Sha-107490	Sarcophilus harrisii	90.85	0.00e+00	5567.00
IUUC-Smo-109103	Selaginella moellendorffii	33.26	0.00e+00	913.00
IUUC-Sit-110670	Setaria italica	31.58	0.00e+00	933.00
IUUC-Sly-110952	Solanum lycopersicum	31.98	0.00e+00	871.00
IUUC-Stu-112624	Solanum tuberosum	31.23	2.00e-147	517.00
IUUC-Sar-113180	Sorex araneus	89.10	0.00e+00	4178.00
IUUC-Sbi-114596	Sorghum bicolor	31.83	0.00e+00	913.00
IUUC-Ssc-115377	Sus scrofa	99.19	0.00e+00	3003.00
IUUC-Tgu-117330	Taeniopygia guttata	88.45	0.00e+00	5464.00
IUUC-Tru-117635	Takifugu rubripes	82.56	0.00e+00	8185.00
IUUC-Tsy-119551	Tarsius syrichta	88.32	0.00e+00	4474.00
IUUC-Tni-119727	Tetraodon nigroviridis	82.26	0.00e+00	8153.00
IUUC-Tca-121017	Theobroma cacao	31.57	0.00e+00	914.00
IUUC-Tae-122892	Triticum aestivum	35.37	2.00e-25	109.00
IUUC-Tur-126292	Triticum urartu	32.63	0.00e+00	944.00
IUUC-Ttr-128332	Tursiops truncatus	95.39	0.00e+00	8340.00
IUUC-Vpa-130615	Vicugna pacos	95.59	0.00e+00	2598.00
IUUC-Vvi-131435	Vitis vinifera	34.16	0.00e+00	822.00
IUUC-Xtr-132130	Xenopus tropicalis	88.76	0.00e+00	2060.00
IUUC-Xma-133859	Xiphophorus maculatus	80.72	0.00e+00	4966.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence