iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
iRefIndex	PINA	HINT	Mentha
Post-translational Modifications (PTMs)
dbPPT	dbPTM
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	4.00e-11	43.5	3	71

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 2    qvtvksldgseltlkvnpsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihll 70
           +v++ +  g+   +k+n +dt+++LK+ +  ++g+++e++r++ + +i +d+ tL+dy ++dg+ + l+
   Q: 3    EVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELY 71
           677777778888999************************************************988886 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MIEVVLNDRL GKKVRVKCND DDTIGDLKKL VAAQTGTRAE KIRIQKWYNI YKDHITLKDY 60
EIHDGMGLEL YYN 73

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTACCAATT CTCAAACCGA CATAAGTACG ACCAAAAAAA AGTTTATAAA TAAAAGTCAC 60
AACGAGCCTT AACGCGTAGA ATCTTCCCGT ACTTTACTTT TCCGGAGGAA TAGAAAATTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0031386--F:protein tag
GO:0006464--P:cellular protein modification process
GO:0000398--P:mRNA splicing, via spliceosome

KEGG

ath:AT5G42300

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001010	Aegilops tauschii	95.89	1.00e-36	142.00
IUUC-Aml-002411	Ailuropoda melanoleuca	81.94	2.00e-30	122.00
IUUC-Atr-002516	Amborella trichopoda	97.26	3.00e-37	145.00
IUUC-Apl-003465	Anas platyrhynchos	73.91	3.00e-16	75.50
IUUC-Aly-005777	Arabidopsis lyrata	98.63	7.00e-38	147.00
IUUC-Afu-009057	Aspergillus fumigatus	38.03	3.00e-07	47.40
IUUC-Ang-009653	Aspergillus niger	49.30	2.00e-13	65.90
IUUC-Bta-012764	Bos taurus	81.94	2.00e-30	122.00
IUUC-Bol-016023	Brassica oleracea	98.63	7.00e-38	147.00
IUUC-Bra-016699	Brassica rapa	98.63	7.00e-38	147.00
IUUC-Cel-018116	Caenorhabditis elegans	75.34	1.00e-29	119.00
IUUC-Cja-019604	Callithrix jacchus	80.56	3.00e-30	121.00
IUUC-Cfa-021198	Canis familiaris	80.56	3.00e-30	121.00
IUUC-Cre-022901	Chlamydomonas reinhardtii	94.52	3.00e-36	142.00
IUUC-Csa-023117	Chlorocebus sabaeus	80.56	3.00e-30	121.00
IUUC-Csv-025896	Ciona savignyi	79.45	1.00e-30	123.00
IUUC-Cgl-026408	Colletotrichum gloeosporioides	36.62	2.00e-07	48.10
IUUC-Cne-026804	Cryptococcus neoformans	67.61	5.00e-26	110.00
IUUC-Dre-028340	Danio rerio	76.00	5.00e-07	44.70
IUUC-Dno-029340	Dasypus novemcinctus	77.97	2.00e-22	98.20
IUUC-Dor-030331	Dipodomys ordii	80.56	3.00e-30	121.00
IUUC-Dme-031835	Drosophila melanogaster	76.71	4.00e-29	118.00
IUUC-Eca-033514	Equus caballus	80.56	3.00e-30	121.00
IUUC-Fca-036549	Felis catus	80.56	3.00e-30	121.00
IUUC-Gma-044188	Glycine max	97.26	6.00e-37	144.00
IUUC-Ggo-045214	Gorilla gorilla	80.56	3.00e-30	121.00
IUUC-Hsa-046750	Homo sapiens	80.56	3.00e-30	121.00
IUUC-Itr-048305	Ictidomys tridecemlineatus	80.56	3.00e-30	121.00
IUUC-Lma-053264	Leptosphaeria maculans	39.19	3.00e-09	54.30
IUUC-Laf-053796	Loxodonta africana	80.56	5.00e-30	121.00
IUUC-Mcc-055394	Macaca mulatta	89.47	9.00e-05	37.40
IUUC-Meu-056624	Macropus eugenii	80.28	2.00e-29	119.00
IUUC-Mtr-057828	Medicago truncatula	94.52	6.00e-36	140.00
IUUC-Mvi-060222	Microbotryum violaceum	72.86	4.00e-28	114.00
IUUC-Mmr-060667	Microcebus murinus	89.47	9.00e-05	37.40
IUUC-Mdo-062221	Monodelphis domestica	79.45	7.00e-30	120.00
IUUC-Mmu-063621	Mus musculus	81.94	2.00e-30	122.00
IUUC-Mac-065471	Musa acuminata	60.27	4.00e-16	75.10
IUUC-Mlu-068080	Myotis lucifugus	80.56	1.00e-29	119.00
IUUC-Nfi-068272	Neosartorya fischeri	38.03	3.00e-07	47.80
IUUC-Nle-070175	Nomascus leucogenys	80.56	3.00e-30	121.00
IUUC-Opr-070581	Ochotona princeps	76.71	3.00e-26	108.00
IUUC-Oan-073687	Ornithorhynchus anatinus	79.17	1.00e-29	119.00
IUUC-Ocu-074142	Oryctolagus cuniculus	80.56	3.00e-30	121.00
IUUC-Ogl-077196	Oryza glaberrima	95.89	9.00e-38	149.00
IUUC-Ogu-078545	Oryza glumaepatula	95.89	3.00e-37	147.00
IUUC-Osa-085847	Oryza sativa	97.26	3.00e-37	145.00
IUUC-Oga-089028	Otolemur garnettii	70.83	3.00e-26	108.00
IUUC-Oar-090112	Ovis aries	55.56	9.00e-18	80.50
IUUC-Ptr-091095	Pan troglodytes	80.56	3.00e-30	121.00
IUUC-Pan-092486	Papio anubis	80.56	3.00e-30	121.00
IUUC-Pno-094869	Phaeosphaeria nodorum	36.49	1.00e-07	49.30
IUUC-Pab-098625	Pongo abelii	80.56	3.00e-30	121.00
IUUC-Pop-099318	Populus trichocarpa	98.63	6.00e-38	147.00
IUUC-Ppe-101464	Prunus persica	97.26	2.00e-37	145.00
IUUC-Pva-103164	Pteropus vampyrus	80.56	3.00e-30	121.00
IUUC-Pte-104204	Pyrenophora teres	37.84	1.00e-08	52.40
IUUC-Rno-105124	Rattus norvegicus	80.56	3.00e-30	121.00
IUUC-Sha-107311	Sarcophilus harrisii	79.45	3.00e-30	122.00
IUUC-Sja-107803	Schizosaccharomyces japonicus	75.00	1.00e-27	112.00
IUUC-Spo-108089	Schizosaccharomyces pombe	69.86	1.00e-27	113.00
IUUC-Sit-110723	Setaria italica	97.26	2.00e-38	150.00
IUUC-Sre-114979	Sporisorium reilianum	70.42	4.00e-27	111.00
IUUC-Ssc-116015	Sus scrofa	80.56	3.00e-30	121.00
IUUC-Tru-118519	Takifugu rubripes	76.71	6.00e-30	120.00
IUUC-Tsy-119241	Tarsius syrichta	68.06	2.00e-21	92.40
IUUC-Tni-120154	Tetraodon nigroviridis	78.08	6.00e-30	120.00
IUUC-Tca-121825	Theobroma cacao	94.52	1.00e-36	143.00
IUUC-Tre-122118	Trichoderma reesei	43.66	1.00e-11	60.10
IUUC-Tvi-122436	Trichoderma virens	42.25	5.00e-11	58.20
IUUC-Tae-122707	Triticum aestivum	94.52	2.00e-37	147.00
IUUC-Tme-127109	Tuber melanosporum	71.23	7.00e-28	114.00
IUUC-Ttr-128878	Tursiops truncatus	80.56	3.00e-30	121.00
IUUC-Vvi-131475	Vitis vinifera	95.89	8.00e-37	143.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence