iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ptr-091491

Ensembl Protein ID

ENSPTRP00000054254.1

UniProt Accession

H2RAP3; H2RAP3_PANTR

Genbank Protein ID

JAA20074.1; JAA25260.1; JAA40238.1

Protein Name

TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa

Genbank Nucleotide ID

AACZ03081427; GABD01007840; GABE01004501

Gene Name

TAF1D

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000032462.3	ENSPTRT00000061711.1	ENSPTRP00000054254.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/Other	98.20	5.00e-127	451.00	IUUC-Hsa-046930

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MDKSGIDSLD HVTSDAVELA NRRDNSSDSS LFKTQCIPYS PKGEKRNPIR KFVHTPESVH 60
ASDSSDSSFE PIPLTIKAIF ERFKNRKKRY KKKKKRRYQP TGRPRGRPEG RRNPIYSLID 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTTTCTTCC GCACGGTTGG AGGAGGTCGG CTGGTTATCG GGAGTTGGAG GGCTGAGGTC 60
GGGAGGGTGG TGTGTACAGA GCTCTAGGAC TCACGCACCA GGCCAGTCGC GGGTTTTGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR027976--TAF1D

Pfam

PF15333--TAF1D

Gene Ontology

GO:0005815--C:microtubule organizing center
GO:0005654--C:nucleoplasm
GO:0005668--C:RNA polymerase transcription factor SL1 complex
GO:0006355--P:regulation of transcription, DNA-templated

KEGG

ptr:451484

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001853	Ailuropoda melanoleuca	66.06	1.00e-55	209.00
IUUC-Apl-003575	Anas platyrhynchos	40.83	3.00e-21	95.10
IUUC-Aca-004568	Anolis carolinensis	45.24	4.00e-27	114.00
IUUC-Ani-009409	Aspergillus nidulans	20.83	4.20e-02	32.70
IUUC-Bta-013078	Bos taurus	63.47	3.00e-45	175.00
IUUC-Cja-019808	Callithrix jacchus	88.13	3.00e-107	380.00
IUUC-Cfa-020525	Canis familiaris	62.03	6.00e-58	217.00
IUUC-Cpo-021896	Cavia porcellus	58.57	1.00e-59	223.00
IUUC-Csa-024108	Chlorocebus sabaeus	92.45	8.00e-124	436.00
IUUC-Cho-024326	Choloepus hoffmanni	60.00	8.00e-65	239.00
IUUC-Dno-029104	Dasypus novemcinctus	65.56	2.00e-64	238.00
IUUC-Dor-030151	Dipodomys ordii	59.01	8.00e-49	186.00
IUUC-Ete-033189	Echinops telfairi	64.29	2.00e-52	199.00
IUUC-Eca-034238	Equus caballus	65.37	2.00e-78	285.00
IUUC-Fca-035711	Felis catus	62.55	7.00e-63	233.00
IUUC-Fal-037067	Ficedula albicollis	47.83	2.00e-21	95.50
IUUC-Gga-040782	Gallus gallus	39.84	1.00e-22	100.00
IUUC-Ggo-045155	Gorilla gorilla	97.48	4.00e-133	466.00
IUUC-Hsa-046930	Homo sapiens	98.20	4.00e-135	473.00
IUUC-Loc-052935	Lepisosteus oculatus	29.09	5.00e-03	36.60
IUUC-Laf-054040	Loxodonta africana	61.89	4.00e-66	244.00
IUUC-Mga-059429	Meleagris gallopavo	38.79	6.00e-22	97.80
IUUC-Mmr-061505	Microcebus murinus	67.20	1.00e-72	266.00
IUUC-Mdo-062193	Monodelphis domestica	43.98	1.00e-27	116.00
IUUC-Mmu-064127	Mus musculus	53.19	3.00e-52	198.00
IUUC-Mpu-065682	Mustela putorius furo	65.02	8.00e-52	196.00
IUUC-Mlu-067425	Myotis lucifugus	63.90	2.00e-70	258.00
IUUC-Nle-069897	Nomascus leucogenys	95.68	7.00e-130	456.00
IUUC-Opr-071021	Ochotona princeps	57.59	2.00e-54	205.00
IUUC-Oan-072853	Ornithorhynchus anatinus	46.09	3.00e-28	120.00
IUUC-Ocu-074088	Oryctolagus cuniculus	60.43	4.00e-57	214.00
IUUC-Oga-089058	Otolemur garnettii	62.82	6.00e-78	283.00
IUUC-Oar-089404	Ovis aries	64.13	2.00e-50	192.00
IUUC-Pan-092706	Papio anubis	92.81	9.00e-125	439.00
IUUC-Psi-093986	Pelodiscus sinensis	38.46	2.00e-19	90.10
IUUC-Pab-097567	Pongo abelii	96.40	5.00e-131	459.00
IUUC-Pva-103062	Pteropus vampyrus	64.68	1.00e-67	249.00
IUUC-Rno-105375	Rattus norvegicus	59.02	3.00e-56	211.00
IUUC-Sha-106880	Sarcophilus harrisii	47.44	2.00e-35	141.00
IUUC-Ssc-115335	Sus scrofa	65.31	5.00e-22	95.50
IUUC-Tgu-117094	Taeniopygia guttata	48.91	9.00e-22	96.30
IUUC-Tsy-119189	Tarsius syrichta	66.41	1.00e-67	249.00
IUUC-Tbe-128047	Tupaia belangeri	59.78	4.00e-67	247.00
IUUC-Ttr-128715	Tursiops truncatus	68.55	9.00e-78	283.00
IUUC-Vpa-130195	Vicugna pacos	59.57	6.00e-74	270.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence