iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fal-037282

Ensembl Protein ID

ENSFALP00000010192.1

UniProt Accession

U3K588; U3K588_FICAL

Genbank Protein ID

ENSFALP00000010192

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTO01000915

Gene Name

CHD5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFALG00000009740.1	ENSFALT00000010232.1	ENSFALP00000010192.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	5.40e-17	61.4	336	381

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C vC++gge    ++ C+ C +++H  Cl ++  e+ p+ + w Cp C++
   Q: 336  DYCEVCQQGGE----IILCDTCPRAYHLVCLDPE-LEKAPEGK-WSCPHCEK 381
           79*********....9******************.*******7.******86 PP

Organism

Ficedula albicollis

Protein Sequence
(Fasta)

MVSCAVWPRE LSLLSPEEDD GVLEGLDAFF AEDQVVVQKK KKSKKLKDGK TAKIKRRKKE 60
GSNDEMSENE EEIEEKSESE GSDYSPNKKK KKKLKDKKEK KPKRKKKDEE EDDNEDGGLK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAGAGCTGA GGCTGGTGCT CTTGCAAGAC CCTTGAGGGA CACCAGTGGG GCAGCTGCCA 60
CTGTGAGGGT CTGCAGGAGA GGGCACAGAG CTCGGTGTCT TGTGGCCTGA GGCTGCTGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR012957--CHD_C2
IPR012958--CHD_N
IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF08074--CHDCT2
PF08073--CHDNT
PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0005829--C:cytosol
GO:0016020--C:membrane
GO:0016607--C:nuclear speck
GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0098532--P:histone H3-K27 trimethylation
GO:0060850--P:regulation of transcription involved in cell fate commitment

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001701	Ailuropoda melanoleuca	88.36	0.00e+00	2791.00
IUUC-Apl-003406	Anas platyrhynchos	84.53	0.00e+00	2614.00
IUUC-Aca-004671	Anolis carolinensis	84.65	0.00e+00	2715.00
IUUC-Aly-005645	Arabidopsis lyrata	38.68	1.00e-150	528.00
IUUC-Ath-007406	Arabidopsis thaliana	39.57	2.00e-155	544.00
IUUC-Ame-011883	Astyanax mexicanus	77.71	0.00e+00	2393.00
IUUC-Bta-012951	Bos taurus	84.43	0.00e+00	2515.00
IUUC-Bol-016073	Brassica oleracea	40.66	2.00e-155	544.00
IUUC-Bra-016724	Brassica rapa	41.00	5.00e-157	549.00
IUUC-Cel-018683	Caenorhabditis elegans	56.15	0.00e+00	1270.00
IUUC-Cja-018871	Callithrix jacchus	83.07	0.00e+00	2578.00
IUUC-Cfa-021063	Canis familiaris	89.14	0.00e+00	2776.00
IUUC-Cpo-022083	Cavia porcellus	87.88	0.00e+00	2736.00
IUUC-Csa-023084	Chlorocebus sabaeus	89.38	0.00e+00	2865.00
IUUC-Dre-028226	Danio rerio	78.70	0.00e+00	2419.00
IUUC-Dme-032150	Drosophila melanogaster	61.34	0.00e+00	1416.00
IUUC-Ete-032757	Echinops telfairi	63.98	0.00e+00	1833.00
IUUC-Eca-034372	Equus caballus	88.68	0.00e+00	2784.00
IUUC-Fca-036048	Felis catus	88.83	0.00e+00	2784.00
IUUC-Gga-040607	Gallus gallus	94.56	0.00e+00	2535.00
IUUC-Gac-041375	Gasterosteus aculeatus	67.94	0.00e+00	2176.00
IUUC-Ggo-044514	Gorilla gorilla	89.27	0.00e+00	2866.00
IUUC-Hsa-046181	Homo sapiens	89.43	0.00e+00	2857.00
IUUC-Loc-052795	Lepisosteus oculatus	80.34	0.00e+00	2660.00
IUUC-Laf-053749	Loxodonta africana	89.42	0.00e+00	2846.00
IUUC-Mcc-055856	Macaca mulatta	89.31	0.00e+00	2865.00
IUUC-Meu-056050	Macropus eugenii	78.21	0.00e+00	1110.00
IUUC-Mga-059630	Meleagris gallopavo	93.67	0.00e+00	2997.00
IUUC-Mmr-060986	Microcebus murinus	88.02	0.00e+00	2748.00
IUUC-Mmu-063644	Mus musculus	88.65	0.00e+00	2850.00
IUUC-Mpu-066528	Mustela putorius furo	85.71	0.00e+00	2758.00
IUUC-Nle-069824	Nomascus leucogenys	86.71	0.00e+00	2609.00
IUUC-Opr-070960	Ochotona princeps	66.49	0.00e+00	2007.00
IUUC-Ont-072647	Oreochromis niloticus	77.92	0.00e+00	2367.00
IUUC-Oan-072885	Ornithorhynchus anatinus	78.26	0.00e+00	1729.00
IUUC-Ola-086961	Oryzias latipes	75.36	0.00e+00	2293.00
IUUC-Oga-088775	Otolemur garnettii	89.11	0.00e+00	2792.00
IUUC-Oar-090301	Ovis aries	87.10	0.00e+00	2704.00
IUUC-Ptr-090586	Pan troglodytes	87.70	0.00e+00	2816.00
IUUC-Pan-092282	Papio anubis	88.73	0.00e+00	2833.00
IUUC-Psi-093007	Pelodiscus sinensis	88.38	0.00e+00	2399.00
IUUC-Pfo-096802	Poecilia formosa	74.84	0.00e+00	2257.00
IUUC-Pab-097677	Pongo abelii	92.59	0.00e+00	2333.00
IUUC-Pca-100559	Procavia capensis	85.53	0.00e+00	2661.00
IUUC-Rno-105378	Rattus norvegicus	88.59	0.00e+00	2802.00
IUUC-Sha-107350	Sarcophilus harrisii	84.19	0.00e+00	2681.00
IUUC-Smo-108946	Selaginella moellendorffii	39.22	2.00e-157	551.00
IUUC-Ssc-116303	Sus scrofa	89.39	0.00e+00	2361.00
IUUC-Tgu-116779	Taeniopygia guttata	88.91	0.00e+00	2739.00
IUUC-Tru-117597	Takifugu rubripes	78.65	0.00e+00	2380.00
IUUC-Tni-120764	Tetraodon nigroviridis	68.41	0.00e+00	2244.00
IUUC-Tbe-128117	Tupaia belangeri	74.79	0.00e+00	979.00
IUUC-Ttr-128301	Tursiops truncatus	87.36	0.00e+00	2792.00
IUUC-Vpa-130209	Vicugna pacos	89.16	6.00e-165	575.00
IUUC-Xtr-132668	Xenopus tropicalis	79.53	0.00e+00	2458.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence