iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Loc-052795

Ensembl Protein ID

ENSLOCP00000006007.1

UniProt Accession

W5MC98; W5MC98_LEPOC

Genbank Protein ID

ENSLOCP00000006007

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AHAT01009786

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLOCG00000004944.1	ENSLOCT00000005993.1	ENSLOCP00000005985.1
ENSLOCG00000004944.1	ENSLOCT00000006015.1	ENSLOCP00000006007.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	9.80e-17	61.1	349	394

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C vC++gge    ++ C+ C +++H  Cl ++  e+ p+ + w Cp C++
   Q: 349  DYCEVCQQGGE----IILCDTCPRAYHLVCLDPE-LEKAPEGK-WSCPHCEK 394
           79*********....9******************.*******7.******86 PP

Organism

Lepisosteus oculatus

Protein Sequence
(Fasta)

MPGSLSNEDE GQDDMDFEDE MPEEEEEEEA EPMALGSLER FFSEEDSVKQ HKKKKPRKPK 60
EGKTPKVKKR KKEGGGSDAD EASEREEGQA EKSESEGSDY SPVKKKKKKP REKKEKKTKR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAACCCCCTT CAGGCGGTGC GCGCTGTGAA TAAAGATCGG AGCGACGGCC ACAGAAAGGG 60
AGAGGGAATT TGTGGTGTTC TTGCCATTTT CAGCACCAGC CGAGCGACTA GTCGAAAATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR012957--CHD_C2
IPR012958--CHD_N
IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF08074--CHDCT2
PF08073--CHDNT
PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001701	Ailuropoda melanoleuca	80.48	0.00e+00	2544.00
IUUC-Apl-003406	Anas platyrhynchos	77.91	0.00e+00	2250.00
IUUC-Aca-004671	Anolis carolinensis	79.44	0.00e+00	2429.00
IUUC-Ame-011883	Astyanax mexicanus	81.69	0.00e+00	2801.00
IUUC-Cja-018871	Callithrix jacchus	84.62	0.00e+00	2117.00
IUUC-Cfa-021063	Canis familiaris	80.77	0.00e+00	2544.00
IUUC-Cpo-022083	Cavia porcellus	79.93	0.00e+00	2522.00
IUUC-Csa-023084	Chlorocebus sabaeus	81.07	0.00e+00	2623.00
IUUC-Dre-028226	Danio rerio	82.68	0.00e+00	2736.00
IUUC-Dme-032150	Drosophila melanogaster	63.52	0.00e+00	1406.00
IUUC-Eca-034372	Equus caballus	81.26	0.00e+00	2546.00
IUUC-Fca-036048	Felis catus	81.20	0.00e+00	2561.00
IUUC-Fal-037282	Ficedula albicollis	80.46	0.00e+00	2581.00
IUUC-Gga-040607	Gallus gallus	81.09	0.00e+00	2220.00
IUUC-Ggo-044514	Gorilla gorilla	81.35	0.00e+00	2608.00
IUUC-Hsa-046181	Homo sapiens	80.96	0.00e+00	2605.00
IUUC-Laf-053749	Loxodonta africana	80.65	0.00e+00	2592.00
IUUC-Mcc-055856	Macaca mulatta	81.32	0.00e+00	2617.00
IUUC-Mga-059630	Meleagris gallopavo	81.36	0.00e+00	2484.00
IUUC-Mmr-060986	Microcebus murinus	80.57	0.00e+00	2575.00
IUUC-Mdo-062971	Monodelphis domestica	70.05	0.00e+00	2268.00
IUUC-Mmu-063644	Mus musculus	80.79	0.00e+00	2603.00
IUUC-Nle-069824	Nomascus leucogenys	79.13	0.00e+00	2389.00
IUUC-Ont-072647	Oreochromis niloticus	82.71	0.00e+00	2768.00
IUUC-Oan-072885	Ornithorhynchus anatinus	68.29	0.00e+00	2091.00
IUUC-Ola-086961	Oryzias latipes	80.16	0.00e+00	2679.00
IUUC-Oga-088775	Otolemur garnettii	81.20	0.00e+00	2601.00
IUUC-Oar-090301	Ovis aries	79.12	0.00e+00	2491.00
IUUC-Ptr-090586	Pan troglodytes	79.39	0.00e+00	2566.00
IUUC-Pan-092282	Papio anubis	81.46	0.00e+00	2593.00
IUUC-Psi-093007	Pelodiscus sinensis	75.88	0.00e+00	2139.00
IUUC-Pfo-096802	Poecilia formosa	84.25	0.00e+00	2453.00
IUUC-Pab-097959	Pongo abelii	73.17	0.00e+00	2138.00
IUUC-Pca-100559	Procavia capensis	79.14	0.00e+00	2000.00
IUUC-Rno-105378	Rattus norvegicus	80.57	0.00e+00	2586.00
IUUC-Sha-107350	Sarcophilus harrisii	74.92	0.00e+00	2393.00
IUUC-Ssc-116303	Sus scrofa	80.56	0.00e+00	2182.00
IUUC-Tgu-116779	Taeniopygia guttata	78.51	0.00e+00	2241.00
IUUC-Tru-117597	Takifugu rubripes	81.99	0.00e+00	2655.00
IUUC-Ttr-128301	Tursiops truncatus	80.72	0.00e+00	2590.00
IUUC-Xtr-132668	Xenopus tropicalis	79.39	0.00e+00	2377.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence