iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oan-072742

Ensembl Protein ID

ENSOANP00000019214.2

UniProt Accession

F7E4X4; F7E4X4_ORNAN

Genbank Protein ID

ENSOANP00000019214

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAPN01236622

Gene Name

DDX58

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOANG00000012131.3	ENSOANT00000019217.3	ENSOANP00000019214.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/CARD	61.81	0.00e+00	986.00	IUUC-Hsa-046671

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Ornithorhynchus anatinus

Protein Sequence
(Fasta)

GPMVSVEKIT ECLLRSDKEN WPKILKTALD MGDCDVVSKL WTLDQDASGK QDIEVEGEQD 60
EESGTFYVSG SYEEEPEKQN FSETLFSSAG VMKTTYSPQN ARSYQMELAK PALVGKNTII 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATGCTTTCT AATGGCCACC TAATAGTTTA CTTTTGTCTC ATGTAGGTTC AGCTTCACTA 60
CGGGCCAATG GTTTCTGTAG AGAAAATAAC CGAATGCCTT CTCAGGTCAG ATAAGGAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR011545--DEAD/DEAH_box_helicase_dom
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR021673--RLR_CTR

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS51789--RLR_CTR

Pfam

PF00270--DEAD
PF00271--Helicase_C
PF11648--RIG-I_C-RD

SMART

SM00487--DEXDc
SM00490--HELICc

Gene Ontology

GO:0015629--C:actin cytoskeleton
GO:0005923--C:bicellular tight junction
GO:0005829--C:cytosol
GO:0032587--C:ruffle membrane
GO:0005524--F:ATP binding
GO:0003690--F:double-stranded DNA binding
GO:0003725--F:double-stranded RNA binding
GO:0016817--F:hydrolase activity, acting on acid anhydrides
GO:0003727--F:single-stranded RNA binding
GO:0008270--F:zinc ion binding
GO:0009597--P:detection of virus
GO:0045087--P:innate immune response
GO:0002230--P:positive regulation of defense response to virus by host
GO:0032725--P:positive regulation of granulocyte macrophage colony-stimulating factor production
GO:0032727--P:positive regulation of interferon-alpha production
GO:0032728--P:positive regulation of interferon-beta production
GO:0032755--P:positive regulation of interleukin-6 production
GO:0032757--P:positive regulation of interleukin-8 production
GO:0042993--P:positive regulation of transcription factor import into nucleus
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0030334--P:regulation of cell migration
GO:0043330--P:response to exogenous dsRNA
GO:0039529--P:RIG-I signaling pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001898	Ailuropoda melanoleuca	59.26	0.00e+00	950.00
IUUC-Apl-003966	Anas platyrhynchos	54.53	0.00e+00	852.00
IUUC-Aca-004499	Anolis carolinensis	47.83	0.00e+00	676.00
IUUC-Ani-009258	Aspergillus nidulans	29.69	1.00e+00	28.10
IUUC-Ame-011950	Astyanax mexicanus	41.61	2.00e-167	582.00
IUUC-Bta-012489	Bos taurus	60.86	0.00e+00	975.00
IUUC-Cel-018230	Caenorhabditis elegans	28.99	8.00e-65	241.00
IUUC-Cja-018716	Callithrix jacchus	61.94	0.00e+00	995.00
IUUC-Cfa-020269	Canis familiaris	61.04	0.00e+00	985.00
IUUC-Cpo-022507	Cavia porcellus	59.72	0.00e+00	932.00
IUUC-Csa-024209	Chlorocebus sabaeus	61.30	0.00e+00	1001.00
IUUC-Cho-025104	Choloepus hoffmanni	55.77	0.00e+00	879.00
IUUC-Cin-025792	Ciona intestinalis	34.77	8.00e-89	320.00
IUUC-Cgl-026385	Colletotrichum gloeosporioides	26.75	2.00e-26	114.00
IUUC-Dno-028954	Dasypus novemcinctus	60.71	0.00e+00	955.00
IUUC-Eca-034039	Equus caballus	61.17	0.00e+00	954.00
IUUC-Eeu-035009	Erinaceus europaeus	56.47	0.00e+00	747.00
IUUC-Fca-036169	Felis catus	60.56	0.00e+00	977.00
IUUC-Fal-037579	Ficedula albicollis	55.00	0.00e+00	836.00
IUUC-Ggo-045318	Gorilla gorilla	60.51	0.00e+00	965.00
IUUC-Hsa-046671	Homo sapiens	61.81	0.00e+00	981.00
IUUC-Itr-047996	Ictidomys tridecemlineatus	59.62	0.00e+00	929.00
IUUC-Lch-050461	Latimeria chalumnae	49.24	0.00e+00	745.00
IUUC-Loc-052582	Lepisosteus oculatus	48.18	0.00e+00	703.00
IUUC-Laf-054324	Loxodonta africana	61.44	0.00e+00	963.00
IUUC-Mcc-055390	Macaca mulatta	61.05	0.00e+00	993.00
IUUC-Meu-056365	Macropus eugenii	51.79	8.00e-165	573.00
IUUC-Mvi-060497	Microbotryum violaceum	26.40	1.00e-27	118.00
IUUC-Mmr-061407	Microcebus murinus	61.17	0.00e+00	1004.00
IUUC-Mmu-063939	Mus musculus	60.66	0.00e+00	975.00
IUUC-Mpu-066226	Mustela putorius furo	58.11	0.00e+00	892.00
IUUC-Mlu-068092	Myotis lucifugus	60.15	0.00e+00	931.00
IUUC-Opr-070246	Ochotona princeps	54.89	1.00e-151	530.00
IUUC-Ocu-073959	Oryctolagus cuniculus	57.85	0.00e+00	919.00
IUUC-Oga-089173	Otolemur garnettii	60.49	0.00e+00	959.00
IUUC-Oar-089369	Ovis aries	60.28	0.00e+00	974.00
IUUC-Ptr-091032	Pan troglodytes	61.81	0.00e+00	981.00
IUUC-Pan-092383	Papio anubis	60.84	0.00e+00	987.00
IUUC-Psi-093432	Pelodiscus sinensis	58.55	0.00e+00	937.00
IUUC-Pma-094367	Petromyzon marinus	40.97	2.00e-110	392.00
IUUC-Pab-098416	Pongo abelii	61.56	0.00e+00	975.00
IUUC-Pca-101006	Procavia capensis	64.56	3.00e-154	538.00
IUUC-Pva-102966	Pteropus vampyrus	61.45	0.00e+00	990.00
IUUC-Rno-105059	Rattus norvegicus	58.67	9.00e-158	549.00
IUUC-Ssl-108450	Sclerotinia sclerotiorum	25.51	8.00e-03	37.00
IUUC-Sar-113202	Sorex araneus	54.81	0.00e+00	662.00
IUUC-Ssc-116120	Sus scrofa	60.61	0.00e+00	933.00
IUUC-Tgu-117314	Taeniopygia guttata	53.65	0.00e+00	823.00
IUUC-Tsy-119453	Tarsius syrichta	62.69	0.00e+00	671.00
IUUC-Tre-122194	Trichoderma reesei	26.48	6.00e-21	96.70
IUUC-Ttr-128421	Tursiops truncatus	56.70	0.00e+00	879.00
IUUC-Vpa-130602	Vicugna pacos	59.21	0.00e+00	944.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence