iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tru-117866

Ensembl Protein ID

ENSTRUP00000020266.1

UniProt Accession

H2T6H7; H2T6H7_TAKRU

Protein Name

Uncharacterized protein

Gene Name

preb

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000008113.1	ENSTRUT00000020350.1	ENSTRUP00000020266.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.20e-06	27.2	172	196

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 9    laf.sd.tllvsGsdDgtikvWDlr 31
           ++f +d  ll++G+ Dg ++vW++ 
   Q: 172  VRFsPDmSLLLTGGTDGHVRVWEFP 196
           67899999**************975 PP

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

MGKKRILDVY RAPFPLYSVK VDPKKGLVVT AGGGGASKTG IKNALLFLDV QLVGAHQYSA 60
SLLHSHDTTT RATMNMAVAD GVIAAGQDGT CCVMKTQFSK QNQGSKAAAN AKSEQQGEVR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGAAGA AAAGGATCTT AGATGTCTAC AGAGCCCCGT TTCCTTTATA TTCTGTGAAA 60
GTGGACCCTA AAAAAGGGCT GGTGGTGACG GCAGGAGGAG GAGGTGCTTC CAAAACTGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030176--C:integral component of endoplasmic reticulum membrane
GO:0005096--F:GTPase activator activity
GO:0051020--F:GTPase binding
GO:0005090--F:Sar guanyl-nucleotide exchange factor activity
GO:0009306--P:protein secretion
GO:0003400--P:regulation of COPII vesicle coating

KEGG

tru:101069970

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000155	Aegilops tauschii	24.38	3.00e-10	59.30
IUUC-Aml-001671	Ailuropoda melanoleuca	54.17	3.00e-108	385.00
IUUC-Atr-002477	Amborella trichopoda	24.51	2.00e-12	66.20
IUUC-Aly-005479	Arabidopsis lyrata	28.07	4.00e-15	75.90
IUUC-Ath-007466	Arabidopsis thaliana	27.63	3.00e-13	69.70
IUUC-Ame-010812	Astyanax mexicanus	57.20	5.00e-79	286.00
IUUC-Bta-012386	Bos taurus	56.28	7.00e-121	427.00
IUUC-Bdi-014110	Brachypodium distachyon	27.69	1.00e-18	87.40
IUUC-Bra-017708	Brassica rapa	28.95	2.00e-16	80.10
IUUC-Cel-018480	Caenorhabditis elegans	25.94	7.00e-27	114.00
IUUC-Cja-018998	Callithrix jacchus	55.24	3.00e-121	428.00
IUUC-Cfa-020666	Canis familiaris	54.88	1.00e-114	405.00
IUUC-Cpo-022030	Cavia porcellus	51.85	3.00e-115	408.00
IUUC-Csa-023521	Chlorocebus sabaeus	55.53	4.00e-112	397.00
IUUC-Cin-025431	Ciona intestinalis	31.60	5.00e-45	175.00
IUUC-Dre-027832	Danio rerio	62.73	1.00e-151	529.00
IUUC-Dno-028989	Dasypus novemcinctus	55.12	4.00e-126	444.00
IUUC-Dme-031901	Drosophila melanogaster	32.42	4.00e-56	211.00
IUUC-Ete-032290	Echinops telfairi	54.40	2.00e-112	399.00
IUUC-Eca-033917	Equus caballus	55.81	4.00e-121	427.00
IUUC-Fca-036323	Felis catus	55.35	2.00e-119	422.00
IUUC-Gmo-038693	Gadus morhua	67.76	2.00e-174	604.00
IUUC-Gga-040702	Gallus gallus	55.16	3.00e-120	425.00
IUUC-Gac-042635	Gasterosteus aculeatus	70.78	2.00e-178	618.00
IUUC-Gma-043946	Glycine max	25.22	6.00e-15	75.10
IUUC-Ggo-044648	Gorilla gorilla	55.01	5.00e-109	387.00
IUUC-Hsa-046003	Homo sapiens	55.43	2.00e-114	405.00
IUUC-Itr-048613	Ictidomys tridecemlineatus	55.42	4.00e-116	411.00
IUUC-Lch-049473	Latimeria chalumnae	58.70	1.00e-138	486.00
IUUC-Lpe-051586	Leersia perrieri	27.27	7.00e-18	84.70
IUUC-Loc-052177	Lepisosteus oculatus	62.09	4.00e-149	520.00
IUUC-Laf-054366	Loxodonta africana	54.86	2.00e-117	415.00
IUUC-Mcc-055775	Macaca mulatta	55.58	3.00e-113	401.00
IUUC-Meu-056562	Macropus eugenii	53.60	4.00e-105	374.00
IUUC-Mtr-058661	Medicago truncatula	24.87	2.00e-15	76.60
IUUC-Mvi-060443	Microbotryum violaceum	24.68	3.00e-09	56.60
IUUC-Mmr-061126	Microcebus murinus	56.17	8.00e-116	410.00
IUUC-Mdo-062928	Monodelphis domestica	54.52	3.00e-109	388.00
IUUC-Mmu-064083	Mus musculus	54.42	1.00e-109	390.00
IUUC-Mac-064955	Musa acuminata	27.48	6.00e-16	78.20
IUUC-Mpu-066857	Mustela putorius furo	54.65	1.00e-126	446.00
IUUC-Mlu-067891	Myotis lucifugus	55.32	2.00e-115	409.00
IUUC-Nle-070030	Nomascus leucogenys	54.27	5.00e-108	384.00
IUUC-Opr-070864	Ochotona princeps	61.11	2.00e-84	306.00
IUUC-Ont-072204	Oreochromis niloticus	76.74	0.00e+00	669.00
IUUC-Oan-073643	Ornithorhynchus anatinus	51.84	1.00e-79	289.00
IUUC-Ocu-074217	Oryctolagus cuniculus	55.20	7.00e-110	390.00
IUUC-Oba-075587	Oryza barthii	27.71	3.00e-18	85.90
IUUC-Obr-076826	Oryza brachyantha	27.24	2.00e-21	96.70
IUUC-Ogl-077927	Oryza glaberrima	27.27	5.00e-18	85.50
IUUC-Ogu-078241	Oryza glumaepatula	27.27	7.00e-18	84.70
IUUC-Oin-080217	Oryza indica	27.27	5.00e-18	85.50
IUUC-Olo-081060	Oryza longistaminata	27.27	1.00e-17	84.00
IUUC-Ome-082007	Oryza meridionalis	27.27	2.00e-18	86.70
IUUC-Oni-082827	Oryza nivara	27.27	5.00e-18	85.50
IUUC-Opu-083159	Oryza punctata	26.86	9.00e-18	84.30
IUUC-Oru-085039	Oryza rufipogon	27.27	5.00e-18	85.50
IUUC-Osa-086258	Oryza sativa	27.27	5.00e-18	85.50
IUUC-Ola-087223	Oryzias latipes	69.23	8.00e-158	549.00
IUUC-Oga-088417	Otolemur garnettii	54.19	3.00e-109	388.00
IUUC-Oar-090435	Ovis aries	56.05	3.00e-120	425.00
IUUC-Ptr-090869	Pan troglodytes	55.32	3.00e-107	381.00
IUUC-Pan-092527	Papio anubis	55.53	4.00e-112	397.00
IUUC-Pma-094156	Petromyzon marinus	53.41	1.00e-115	409.00
IUUC-Ppa-095904	Physcomitrella patens	27.82	7.00e-14	71.60
IUUC-Pfo-097488	Poecilia formosa	64.40	3.00e-170	591.00
IUUC-Pab-097720	Pongo abelii	55.20	6.00e-112	397.00
IUUC-Pop-099618	Populus trichocarpa	25.65	3.00e-15	75.90
IUUC-Pca-100288	Procavia capensis	53.69	6.00e-97	347.00
IUUC-Ppe-101864	Prunus persica	24.65	1.00e-13	70.90
IUUC-Pva-103192	Pteropus vampyrus	55.81	5.00e-117	414.00
IUUC-Rno-106123	Rattus norvegicus	54.27	5.00e-109	387.00
IUUC-Sha-107169	Sarcophilus harrisii	54.42	7.00e-110	390.00
IUUC-Smo-109265	Selaginella moellendorffii	29.46	4.00e-13	68.90
IUUC-Sly-111551	Solanum lycopersicum	27.83	5.00e-14	72.00
IUUC-Stu-112264	Solanum tuberosum	28.06	2.00e-12	67.00
IUUC-Sar-113218	Sorex araneus	56.76	9.00e-68	249.00
IUUC-Ssc-115282	Sus scrofa	54.33	1.00e-114	406.00
IUUC-Tca-121083	Theobroma cacao	27.59	7.00e-17	81.60
IUUC-Tae-124218	Triticum aestivum	26.15	1.00e-17	84.00
IUUC-Tur-126597	Triticum urartu	24.38	4.00e-09	55.10
IUUC-Ttr-128585	Tursiops truncatus	53.95	1.00e-109	389.00
IUUC-Vvi-131024	Vitis vinifera	26.84	2.00e-16	80.10
IUUC-Xma-134081	Xiphophorus maculatus	65.34	1.00e-165	576.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence