iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Oga-088061

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03016978

Gene Name

POC1B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000008265.2	ENSOGAT00000008271.2	ENSOGAP00000007402.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-56	185.2	143	178
UBD/Beta-Prp	3.20e-84	282.6	59	310

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           Ht +v+c +f +d +l+vs+s D+tik+WD++   +
   Q: 143  HTHWVRCAKFsPDgRLIVSCSEDKTIKIWDTTNKQC 178
           9**********999****************987665 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsv 97
           hk+v+t+v+fsp+++lla++srd+t+++w  +++ + ++++ h+a+v++v+fs dg++l+t+seD+ ikvw++     +++l +h++ v
   Q: 59   HKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKKGKSSEIKAHTAPVRSVDFSTDGQYLATASEDKSIKVWSMYRQRFLYSLYRHTHWV 147
           788************************************************************************************** PP
   S: 98   lslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvysl 186
           ++ +fsp+g  +vs s+d+ti++wd+ ++qc++  +s   g+ n+v ++p+g +++s++ D+tv++Wd++ +kll++ +  h + v+ l
   Q: 148  RCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVN-NFSDSVGFANYVDFNPNGTCIASAGSDQTVKIWDIRLNKLLQHYQV-HSGGVNYL 234
           *********************************.*********************************************8.******** PP
   S: 187  sfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW.....dlrsgdll 257
           sf+++g++l+s++ dgt+k+ dl +g+ ++tl+ght +v  v fs+ +e+++sg++D ++ +W     dl s+dl+
   Q: 235  SFHPSGNFLISAASDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWrtnfdDLPSKDLN 310
           ***************************************************************9988855555544 PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

MASATEDPVL ERYFKGHKAA ITTVDFSPNG KQLATASWDT FLMLWNFKPQ ARAYRYMGHK 60
DVVTSVQFSP HGNLLASASR DRTVRLWIPD KKGKSSEIKA HTAPVRSVDF STDGQYLATA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCTCTG CCACGGTAAG GCCGGGCGGG GACCCCCCTC CCCGGAGCCT TGGGTGCGAG 60
GCCAGGTGGG GACCGCCCCG CACCTGGCGG GAGACGGAGG CAGGTGTCTG CAGCCGGGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005814--C:centriole
GO:0036064--C:ciliary basal body
GO:0000922--C:spindle pole
GO:0008283--P:cell proliferation
GO:0060271--P:cilium assembly
GO:0001895--P:retina homeostasis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002219	Ailuropoda melanoleuca	89.49	5.00e-175	607.00
IUUC-Apl-004219	Anas platyrhynchos	69.65	2.00e-136	478.00
IUUC-Aca-005197	Anolis carolinensis	64.06	1.00e-140	493.00
IUUC-Ame-011000	Astyanax mexicanus	64.45	4.00e-139	488.00
IUUC-Bta-012706	Bos taurus	88.73	0.00e+00	662.00
IUUC-Cja-019185	Callithrix jacchus	90.46	0.00e+00	666.00
IUUC-Cfa-021274	Canis familiaris	91.20	0.00e+00	662.00
IUUC-Cpo-022351	Cavia porcellus	86.99	0.00e+00	651.00
IUUC-Csa-023032	Chlorocebus sabaeus	93.45	0.00e+00	671.00
IUUC-Cho-024508	Choloepus hoffmanni	79.81	1.00e-148	519.00
IUUC-Dre-028703	Danio rerio	63.87	9.00e-139	486.00
IUUC-Dno-028915	Dasypus novemcinctus	89.42	2.00e-173	602.00
IUUC-Dor-030306	Dipodomys ordii	74.57	5.00e-153	533.00
IUUC-Ete-032353	Echinops telfairi	78.20	2.00e-161	561.00
IUUC-Eca-034136	Equus caballus	90.42	1.00e-174	605.00
IUUC-Eeu-034611	Erinaceus europaeus	86.17	1.00e-131	462.00
IUUC-Fca-036205	Felis catus	88.82	4.00e-167	580.00
IUUC-Gga-040847	Gallus gallus	66.76	7.00e-139	487.00
IUUC-Ggo-045194	Gorilla gorilla	91.33	0.00e+00	677.00
IUUC-Hsa-047026	Homo sapiens	91.62	0.00e+00	679.00
IUUC-Itr-048943	Ictidomys tridecemlineatus	87.58	2.00e-171	594.00
IUUC-Lch-050067	Latimeria chalumnae	67.05	3.00e-147	514.00
IUUC-Loc-052409	Lepisosteus oculatus	65.42	3.00e-142	498.00
IUUC-Laf-053428	Loxodonta africana	90.62	0.00e+00	660.00
IUUC-Mcc-054772	Macaca mulatta	92.49	0.00e+00	686.00
IUUC-Meu-056496	Macropus eugenii	72.83	2.00e-152	531.00
IUUC-Mga-059276	Meleagris gallopavo	63.48	7.00e-135	473.00
IUUC-Mmr-061525	Microcebus murinus	92.49	0.00e+00	683.00
IUUC-Mdo-062351	Monodelphis domestica	80.64	1.00e-174	605.00
IUUC-Mmu-063834	Mus musculus	83.24	5.00e-177	613.00
IUUC-Mpu-066453	Mustela putorius furo	90.17	0.00e+00	669.00
IUUC-Mlu-067909	Myotis lucifugus	90.13	4.00e-175	607.00
IUUC-Nle-069206	Nomascus leucogenys	91.62	0.00e+00	678.00
IUUC-Opr-070566	Ochotona princeps	76.25	4.00e-154	537.00
IUUC-Ont-072587	Oreochromis niloticus	62.14	3.00e-135	474.00
IUUC-Oan-073726	Ornithorhynchus anatinus	76.57	4.00e-144	504.00
IUUC-Ocu-074639	Oryctolagus cuniculus	91.91	0.00e+00	674.00
IUUC-Ola-086913	Oryzias latipes	60.87	5.00e-131	461.00
IUUC-Oar-090228	Ovis aries	88.73	0.00e+00	659.00
IUUC-Ptr-091420	Pan troglodytes	91.62	0.00e+00	679.00
IUUC-Pan-092228	Papio anubis	92.20	0.00e+00	685.00
IUUC-Psi-093309	Pelodiscus sinensis	70.59	3.00e-144	504.00
IUUC-Ppa-095677	Physcomitrella patens	46.56	3.00e-82	298.00
IUUC-Pfo-096162	Poecilia formosa	61.01	1.00e-123	436.00
IUUC-Pab-098109	Pongo abelii	91.62	0.00e+00	681.00
IUUC-Pva-102712	Pteropus vampyrus	90.17	0.00e+00	670.00
IUUC-Rno-105260	Rattus norvegicus	82.66	2.00e-178	618.00
IUUC-Sar-113446	Sorex araneus	82.27	9.00e-173	599.00
IUUC-Ssc-115794	Sus scrofa	90.46	0.00e+00	662.00
IUUC-Tgu-116770	Taeniopygia guttata	62.97	2.00e-127	449.00
IUUC-Tru-117968	Takifugu rubripes	63.11	2.00e-128	452.00
IUUC-Tsy-119316	Tarsius syrichta	72.76	6.00e-134	470.00
IUUC-Tni-119953	Tetraodon nigroviridis	57.68	3.00e-115	408.00
IUUC-Tbe-128071	Tupaia belangeri	84.29	1.00e-160	559.00
IUUC-Ttr-129267	Tursiops truncatus	88.73	0.00e+00	654.00
IUUC-Vpa-130823	Vicugna pacos	79.77	3.00e-161	561.00
IUUC-Xtr-131768	Xenopus tropicalis	65.90	9.00e-143	499.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence