iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-028409

UUCD1 version

UUC-DaR-00196

Ensembl Protein ID

ENSDARP00000095486.2

UniProt Accession

B3DK16; PCF5A_DANRE

Genbank Protein ID

AAI63687.1; AAI63702.1

Protein Name

Polycomb group RING finger protein 5-A

Genbank Nucleotide ID

BC163687; BC163702

Gene Name

pcgf5a; zgc:194668

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000071007.3	ENSDART00000104715.3	ENSDARP00000095486.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/RAWUL	1.30e-30	106.7	137	228

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/RAWUL

   S: 1    islsLeplesnkakddsk...lkkkylrcsarltVkhlkkflaeklklsssyevdllcedevLednetLeeikyifiwk....kegpLv 82
           i+++L++l++n+++++s    l+kk++rcs+r+tV+++kkfl+ klkl+ssye+d+lc++e++++++tLe+i y ++w+    + +p+v
   Q: 137  IAICLDCLRNNGQSGESIvkgLMKKFIRCSTRVTVGTIKKFLCVKLKLPSSYELDVLCNGEIMGKDHTLEFI-YRTRWRlqgdSAYPMV 224
           79*************99899****************************************************.*********9****** PP
   S: 83   LqYr 86
           L+Yr
   Q: 225  LEYR 228
           ***9 PP

Organism

Danio rerio

Functional Description
(View)

Component of Polycomb group (PcG) multiprotein complexes; the complex class is required to maintain the transcriptionally repressive state of some genes.

Protein Sequence
(Fasta)

MATHRKHLVR DFNRYITCSI CRGYLIKPTA VTECLHTFCK SCIVQHFEES NECPECGIQV 60
HETNPLEMLR LDKTLEEIIF KLVPGLREKE EHQESEFWRK HKIKSNGEDG PRAKKSRLSG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGTTTACCA GCCACGCACT GCCTGCACGC GCTCCATCCA CCGCCGGGCT GCAGCGATGT 60
GACTCTCTCC GGTTCTCACT ACCCCCTTCC ACGGTCTCCA TTACCGAACC GGCGCAGTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR032443--RAWUL
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF16207--RAWUL

SMART

SM00184--RING

Gene Ontology

GO:0031519--C:PcG protein complex
GO:0008270--F:zinc ion binding
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

dre:562327

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002093	Ailuropoda melanoleuca	71.04	4.00e-95	340.00
IUUC-Apl-003757	Anas platyrhynchos	71.48	2.00e-95	341.00
IUUC-Aca-005032	Anolis carolinensis	72.27	7.00e-94	336.00
IUUC-Ame-011418	Astyanax mexicanus	88.28	1.00e-119	422.00
IUUC-Bta-013081	Bos taurus	71.88	3.00e-94	337.00
IUUC-Cel-018403	Caenorhabditis elegans	28.69	9.00e-27	115.00
IUUC-Cja-019296	Callithrix jacchus	71.65	8.00e-96	343.00
IUUC-Cfa-020437	Canis familiaris	71.88	1.00e-95	342.00
IUUC-Cpo-022107	Cavia porcellus	70.93	3.00e-95	341.00
IUUC-Csa-023103	Chlorocebus sabaeus	71.88	1.00e-95	342.00
IUUC-Cin-025711	Ciona intestinalis	42.25	1.00e-37	149.00
IUUC-Csv-026354	Ciona savignyi	42.61	3.00e-44	171.00
IUUC-Dno-030077	Dasypus novemcinctus	71.88	1.00e-95	342.00
IUUC-Ete-033131	Echinops telfairi	62.60	2.00e-75	275.00
IUUC-Eca-034226	Equus caballus	68.36	7.00e-90	323.00
IUUC-Fca-035545	Felis catus	71.88	1.00e-95	342.00
IUUC-Fal-037615	Ficedula albicollis	71.48	2.00e-95	341.00
IUUC-Ggo-045087	Gorilla gorilla	71.88	1.00e-95	342.00
IUUC-Hsa-046738	Homo sapiens	71.88	1.00e-95	342.00
IUUC-Itr-048443	Ictidomys tridecemlineatus	66.32	4.00e-59	220.00
IUUC-Lch-050434	Latimeria chalumnae	72.05	1.00e-102	365.00
IUUC-Laf-053509	Loxodonta africana	71.88	2.00e-95	342.00
IUUC-Mcc-055709	Macaca mulatta	71.88	8.00e-96	343.00
IUUC-Mmr-060776	Microcebus murinus	71.48	1.00e-93	336.00
IUUC-Mdo-061959	Monodelphis domestica	71.37	2.00e-96	344.00
IUUC-Mmu-063483	Mus musculus	77.97	4.00e-95	340.00
IUUC-Mpu-066861	Mustela putorius furo	71.88	1.00e-95	342.00
IUUC-Mlu-067880	Myotis lucifugus	71.88	2.00e-95	342.00
IUUC-Nle-069264	Nomascus leucogenys	71.88	1.00e-95	342.00
IUUC-Opr-070746	Ochotona princeps	50.37	1.00e-53	203.00
IUUC-Ont-071361	Oreochromis niloticus	71.71	1.00e-93	335.00
IUUC-Ocu-073885	Oryctolagus cuniculus	71.88	2.00e-95	342.00
IUUC-Oba-075928	Oryza barthii	45.07	1.00e-11	64.30
IUUC-Ogl-077158	Oryza glaberrima	45.07	1.00e-11	64.30
IUUC-Ogu-078857	Oryza glumaepatula	45.07	1.00e-11	64.30
IUUC-Oin-080071	Oryza indica	45.07	1.00e-11	64.30
IUUC-Olo-080821	Oryza longistaminata	45.07	1.00e-11	64.30
IUUC-Oru-084344	Oryza rufipogon	45.07	1.00e-11	64.30
IUUC-Oga-088504	Otolemur garnettii	71.09	1.00e-94	339.00
IUUC-Oar-089963	Ovis aries	72.27	9.00e-96	343.00
IUUC-Ptr-090820	Pan troglodytes	71.48	2.00e-95	341.00
IUUC-Pan-092600	Papio anubis	71.88	8.00e-96	343.00
IUUC-Psi-093699	Pelodiscus sinensis	72.66	2.00e-96	345.00
IUUC-Pma-094238	Petromyzon marinus	65.08	4.00e-85	307.00
IUUC-Pfo-096402	Poecilia formosa	76.89	4.00e-96	343.00
IUUC-Pab-097621	Pongo abelii	71.88	1.00e-95	342.00
IUUC-Pca-100342	Procavia capensis	71.48	5.00e-95	340.00
IUUC-Pva-103118	Pteropus vampyrus	71.48	7.00e-94	336.00
IUUC-Sha-107627	Sarcophilus harrisii	66.49	1.00e-59	222.00
IUUC-Sit-109956	Setaria italica	43.53	2.00e-11	63.90
IUUC-Sar-113005	Sorex araneus	59.77	2.00e-81	295.00
IUUC-Sbi-114041	Sorghum bicolor	44.74	1.00e-11	62.40
IUUC-Tgu-117081	Taeniopygia guttata	71.48	2.00e-95	341.00
IUUC-Tru-117696	Takifugu rubripes	67.67	3.00e-90	324.00
IUUC-Tsy-119052	Tarsius syrichta	55.50	5.00e-61	227.00
IUUC-Tni-120530	Tetraodon nigroviridis	70.87	5.00e-87	313.00
IUUC-Ttr-128739	Tursiops truncatus	59.38	1.00e-69	256.00
IUUC-Vpa-130189	Vicugna pacos	71.09	8.00e-93	333.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence