iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aml-002421

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACTA01192311

Gene Name

TRIM55

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMEG00000012338.1	ENSAMET00000013558.1	ENSAMEP00000013013.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-08	35.6	26	85

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw..............pglknssskefrCPlCr 46
           C+iCle+f +++++lpC+H  +++C   +               g    s ++frCP Cr
   Q: 26   CPICLEMFTKPVVILPCQHNLCRKCASDIfqqeqasnpylptrGGTTVASGGRFRCPSCR 85
           *************************74444555688888999988888899********8 PP

Organism

Ailuropoda melanoleuca

Protein Sequence
(Fasta)

MSASLNYKSF SKEQQTMDNL EKQLICPICL EMFTKPVVIL PCQHNLCRKC ASDIFQQEQA 60
SNPYLPTRGG TTVASGGRFR CPSCRHEVVL DRHGIYGLQR NLLVENIIDI YKQESTRPEK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCGCAT CTTTGAATTA TAAGTCTTTT TCCAAAGAGC AGCAGACCAT GGATAACTTG 60
GAGAAGCAAC TCATCTGTCC TATCTGCTTA GAGATGTTCA CAAAACCCGT GGTTATTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR017903--COS_domain
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51262--COS
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003341	Anas platyrhynchos	71.25	0.00e+00	684.00
IUUC-Aca-005384	Anolis carolinensis	85.67	1.00e-168	586.00
IUUC-Ame-010720	Astyanax mexicanus	71.16	2.00e-138	485.00
IUUC-Bta-013040	Bos taurus	88.69	0.00e+00	864.00
IUUC-Cja-019932	Callithrix jacchus	90.74	0.00e+00	875.00
IUUC-Cfa-020450	Canis familiaris	94.39	0.00e+00	937.00
IUUC-Cpo-021767	Cavia porcellus	87.43	0.00e+00	890.00
IUUC-Csa-023600	Chlorocebus sabaeus	90.05	0.00e+00	878.00
IUUC-Cho-024753	Choloepus hoffmanni	77.09	0.00e+00	720.00
IUUC-Cin-025224	Ciona intestinalis	49.84	1.00e-92	333.00
IUUC-Csv-026374	Ciona savignyi	50.00	1.00e-79	289.00
IUUC-Dre-028701	Danio rerio	70.22	2.00e-136	478.00
IUUC-Dno-030008	Dasypus novemcinctus	88.79	0.00e+00	886.00
IUUC-Ete-032274	Echinops telfairi	81.31	0.00e+00	784.00
IUUC-Eca-034326	Equus caballus	91.12	0.00e+00	867.00
IUUC-Fca-035385	Felis catus	93.00	0.00e+00	865.00
IUUC-Fal-036679	Ficedula albicollis	88.99	5.00e-176	610.00
IUUC-Gmo-039021	Gadus morhua	64.26	1.00e-118	418.00
IUUC-Gga-040576	Gallus gallus	88.68	1.00e-173	602.00
IUUC-Gac-042165	Gasterosteus aculeatus	65.65	3.00e-131	461.00
IUUC-Ggo-044496	Gorilla gorilla	89.69	0.00e+00	865.00
IUUC-Hsa-046337	Homo sapiens	90.24	0.00e+00	863.00
IUUC-Lch-050504	Latimeria chalumnae	64.69	4.00e-180	624.00
IUUC-Loc-052717	Lepisosteus oculatus	55.92	2.00e-153	535.00
IUUC-Laf-053838	Loxodonta africana	82.66	0.00e+00	848.00
IUUC-Mcc-054690	Macaca mulatta	89.87	0.00e+00	851.00
IUUC-Meu-056782	Macropus eugenii	68.03	0.00e+00	634.00
IUUC-Mga-060112	Meleagris gallopavo	89.31	2.00e-175	608.00
IUUC-Mmr-061229	Microcebus murinus	89.40	0.00e+00	867.00
IUUC-Mdo-062397	Monodelphis domestica	77.09	0.00e+00	746.00
IUUC-Mmu-063764	Mus musculus	83.94	0.00e+00	822.00
IUUC-Mpu-066503	Mustela putorius furo	94.55	0.00e+00	904.00
IUUC-Mlu-068160	Myotis lucifugus	98.84	4.00e-103	366.00
IUUC-Nle-069170	Nomascus leucogenys	89.49	0.00e+00	866.00
IUUC-Ont-072082	Oreochromis niloticus	67.51	5.00e-131	460.00
IUUC-Oan-072715	Ornithorhynchus anatinus	73.45	0.00e+00	714.00
IUUC-Ocu-074747	Oryctolagus cuniculus	87.70	0.00e+00	795.00
IUUC-Ola-086646	Oryzias latipes	65.30	4.00e-127	447.00
IUUC-Oga-087995	Otolemur garnettii	90.55	0.00e+00	890.00
IUUC-Oar-089844	Ovis aries	89.74	0.00e+00	876.00
IUUC-Ptr-091556	Pan troglodytes	90.05	0.00e+00	862.00
IUUC-Pan-092224	Papio anubis	90.24	0.00e+00	852.00
IUUC-Psi-093856	Pelodiscus sinensis	71.61	0.00e+00	714.00
IUUC-Pma-094534	Petromyzon marinus	55.52	9.00e-100	356.00
IUUC-Pfo-096596	Poecilia formosa	61.00	6.00e-128	450.00
IUUC-Pca-100510	Procavia capensis	83.67	0.00e+00	820.00
IUUC-Pva-102962	Pteropus vampyrus	90.20	0.00e+00	822.00
IUUC-Rno-105696	Rattus norvegicus	83.39	0.00e+00	804.00
IUUC-Sha-106825	Sarcophilus harrisii	76.87	0.00e+00	758.00
IUUC-Sar-113763	Sorex araneus	85.39	8.00e-119	420.00
IUUC-Ssc-116332	Sus scrofa	90.89	0.00e+00	836.00
IUUC-Tgu-117208	Taeniopygia guttata	88.68	2.00e-176	611.00
IUUC-Tru-118744	Takifugu rubripes	64.65	1.00e-129	456.00
IUUC-Tsy-119352	Tarsius syrichta	85.66	0.00e+00	856.00
IUUC-Tni-120413	Tetraodon nigroviridis	66.77	5.00e-128	450.00
IUUC-Tbe-127821	Tupaia belangeri	97.55	2.00e-120	426.00
IUUC-Ttr-128545	Tursiops truncatus	89.01	0.00e+00	821.00
IUUC-Vpa-130699	Vicugna pacos	97.58	0.00e+00	677.00
IUUC-Xtr-132207	Xenopus tropicalis	62.94	7.00e-180	623.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence