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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Rno-105220
UUCD1 version UUC-RaN-00279
Ensembl Protein ID ENSRNOP00000001486.7
UniProt Accession D3ZTN5; D3ZTN5_RAT
Genbank Protein ID EDM13807.1
Protein Name Putative uncharacterized protein RGD1560195_predicted; Ring finger protein, transmembrane 2
Genbank Nucleotide ID AABR07036464
Gene Name Rnft2; RGD1560195_predicted; rCG_21811
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000001124.7 ENSRNOT00000001486.7 ENSRNOP00000001486.7
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
RAID2
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/RING 5.40e-07 30.4 385 423
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING
   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC+ +f+d p++l C+Hvf+++Cl  w        +e +CPlCr
   Q: 385  CAICQAEFRD-PMILLCQHVFCEECLCLW------LDRERTCPLCR 423
           **********.999***************......**********8 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MWLLAAHQVL RKMQRRHSSN TDNIPPERSR SQALSPEASV DEGGVFESLK AEPASPPTLF 60
SGLAGGLPAS PFPAGLVLGS TAGGGDVFIP MPATRDEAGG RSTEGSTYHH RQAHHHFHHG 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105220|E3,RING|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CAGAGGCAGG CCTCACTGTG CCTGGGTCCT AGCGCCGACC ATATTCTCTG TGGCTGAACC 60
GGCCGGAAGT CACGTGCCGC CCTGGTCACG CCAGTGATTG GCTGGGCTGG ATTAGCAGAG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105220|E3,RING|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2
SMART

SM00184--RING
Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding
KEGG rno:304521
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000709 Aegilops tauschii 26.38 5.00e-27 114.00
IUUC-Aml-002361 Ailuropoda melanoleuca 89.14 0.00e+00 738.00
IUUC-Apl-003413 Anas platyrhynchos 81.22 0.00e+00 679.00
IUUC-Aca-005181 Anolis carolinensis 79.28 0.00e+00 692.00
IUUC-Aly-005949 Arabidopsis lyrata 30.27 8.00e-38 151.00
IUUC-Ath-007582 Arabidopsis thaliana 30.66 5.00e-39 155.00
IUUC-Ame-011821 Astyanax mexicanus 64.21 6.00e-163 566.00
IUUC-Bta-012475 Bos taurus 88.42 0.00e+00 744.00
IUUC-Bdi-014696 Brachypodium distachyon 30.77 4.00e-37 149.00
IUUC-Bol-015956 Brassica oleracea 29.67 2.00e-35 143.00
IUUC-Bra-016928 Brassica rapa 30.27 2.00e-37 149.00
IUUC-Cel-018190 Caenorhabditis elegans 24.58 4.00e-23 102.00
IUUC-Cja-019920 Callithrix jacchus 91.01 0.00e+00 733.00
IUUC-Cfa-020715 Canis familiaris 89.31 0.00e+00 743.00
IUUC-Cpo-021829 Cavia porcellus 91.24 0.00e+00 712.00
IUUC-Csa-023156 Chlorocebus sabaeus 90.56 0.00e+00 681.00
IUUC-Cho-025100 Choloepus hoffmanni 89.07 0.00e+00 694.00
IUUC-Dre-027857 Danio rerio 66.14 1.00e-167 582.00
IUUC-Dno-030046 Dasypus novemcinctus 86.19 0.00e+00 734.00
IUUC-Dor-030446 Dipodomys ordii 69.28 5.00e-161 560.00
IUUC-Dme-031681 Drosophila melanogaster 31.72 1.00e-31 131.00
IUUC-Eca-033852 Equus caballus 82.52 0.00e+00 698.00
IUUC-Fca-036281 Felis catus 88.39 0.00e+00 732.00
IUUC-Fal-037647 Ficedula albicollis 85.14 4.00e-153 533.00
IUUC-Gga-040867 Gallus gallus 80.77 0.00e+00 685.00
IUUC-Gma-044109 Glycine max 30.95 7.00e-35 141.00
IUUC-Hsa-046314 Homo sapiens 91.46 0.00e+00 721.00
IUUC-Hvu-047080 Hordeum vulgare 28.29 4.00e-30 124.00
IUUC-Lch-049901 Latimeria chalumnae 68.37 4.00e-165 574.00
IUUC-Lpe-051163 Leersia perrieri 29.93 1.00e-37 150.00
IUUC-Loc-051924 Lepisosteus oculatus 66.06 4.00e-169 587.00
IUUC-Laf-053448 Loxodonta africana 88.05 0.00e+00 758.00
IUUC-Mcc-054949 Macaca mulatta 91.24 0.00e+00 692.00
IUUC-Meu-056283 Macropus eugenii 63.49 4.00e-139 487.00
IUUC-Mtr-057979 Medicago truncatula 28.62 3.00e-37 149.00
IUUC-Mga-059843 Meleagris gallopavo 80.54 0.00e+00 680.00
IUUC-Mmr-061235 Microcebus murinus 84.04 0.00e+00 673.00
IUUC-Mdo-062268 Monodelphis domestica 79.15 0.00e+00 692.00
IUUC-Mmu-063985 Mus musculus 97.98 0.00e+00 849.00
IUUC-Mac-065493 Musa acuminata 29.34 3.00e-40 159.00
IUUC-Mpu-066469 Mustela putorius furo 88.64 0.00e+00 739.00
IUUC-Mlu-067707 Myotis lucifugus 86.47 0.00e+00 723.00
IUUC-Ont-072228 Oreochromis niloticus 65.78 9.00e-164 569.00
IUUC-Ocu-073985 Oryctolagus cuniculus 85.20 0.00e+00 729.00
IUUC-Oba-075245 Oryza barthii 29.48 5.00e-31 127.00
IUUC-Obr-076737 Oryza brachyantha 29.88 2.00e-26 112.00
IUUC-Ogl-077684 Oryza glaberrima 29.93 3.00e-37 149.00
IUUC-Ogu-078859 Oryza glumaepatula 29.93 3.00e-37 149.00
IUUC-Oin-079424 Oryza indica 29.93 4.00e-37 149.00
IUUC-Ome-081614 Oryza meridionalis 30.27 2.00e-32 133.00
IUUC-Oni-082296 Oryza nivara 30.27 5.00e-33 135.00
IUUC-Opu-083546 Oryza punctata 30.27 7.00e-33 134.00
IUUC-Oru-085138 Oryza rufipogon 29.20 1.00e-34 140.00
IUUC-Osa-085729 Oryza sativa 30.43 3.00e-37 149.00
IUUC-Ola-086621 Oryzias latipes 62.61 2.00e-150 525.00
IUUC-Olu-087799 Ostreococcus lucimarinus 30.82 1.00e-14 72.40
IUUC-Ptr-091587 Pan troglodytes 91.69 0.00e+00 723.00
IUUC-Pan-092883 Papio anubis 91.24 0.00e+00 692.00
IUUC-Psi-093826 Pelodiscus sinensis 80.32 0.00e+00 674.00
IUUC-Ppa-095990 Physcomitrella patens 28.97 5.00e-34 138.00
IUUC-Pfo-096621 Poecilia formosa 57.38 1.00e-147 516.00
IUUC-Pop-098860 Populus trichocarpa 28.57 2.00e-35 143.00
IUUC-Pca-100148 Procavia capensis 87.53 0.00e+00 675.00
IUUC-Ppe-101974 Prunus persica 30.95 4.00e-35 142.00
IUUC-Pva-102165 Pteropus vampyrus 86.86 0.00e+00 717.00
IUUC-Smo-109495 Selaginella moellendorffii 29.79 1.00e-36 147.00
IUUC-Sit-110120 Setaria italica 29.59 1.00e-36 147.00
IUUC-Sly-111923 Solanum lycopersicum 29.25 3.00e-37 149.00
IUUC-Stu-112700 Solanum tuberosum 29.25 2.00e-30 126.00
IUUC-Sbi-114889 Sorghum bicolor 29.59 9.00e-33 134.00
IUUC-Ssc-115358 Sus scrofa 88.42 0.00e+00 758.00
IUUC-Tru-117949 Takifugu rubripes 63.58 5.00e-161 560.00
IUUC-Tni-120152 Tetraodon nigroviridis 67.52 6.00e-129 453.00
IUUC-Tca-121155 Theobroma cacao 30.27 2.00e-35 143.00
IUUC-Tae-124618 Triticum aestivum 28.91 8.00e-38 151.00
IUUC-Tur-126400 Triticum urartu 29.89 1.00e-34 140.00
IUUC-Ttr-128557 Tursiops truncatus 88.42 0.00e+00 744.00
IUUC-Vvi-131323 Vitis vinifera 29.59 8.00e-32 131.00
IUUC-Xtr-132785 Xenopus tropicalis 65.91 1.00e-141 496.00
IUUC-Xma-133737 Xiphophorus maculatus 62.17 2.00e-157 548.00
Created Date 25-Jun-2017

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