iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000021378.11	ENSDART00000021577.10	ENSDARP00000019987.9
ENSDARG00000021378.11	ENSDART00000146882.1	ENSDARP00000114626.1
ENSDARG00000021378.11	ENSDART00000126499.2	ENSDARP00000111141.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.30e-10	41.4	462	507

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C vC+++g+    l++C+ C++++H +Cl ++  ++ p+   wiCpkC++
   Q: 462  DFCTVCRRSGQ----LLMCDTCSRVYHLDCLDPP-LKNIPKGM-WICPKCQD 507
           79*********....*******************.*******7.******85 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MELQTLQEAL KVEIQVHQKL VAQMKQDPQN ADLKKQLHEL QAKITALSEK QKKVVEQLRK 60
ELLVKQEPDL KPQTFAATTD GKTVLLTAAC PASQPISGPP HNQGAPQKTL TVTPVITAKT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGATTGA AGAAGAGTTC TTGTTTTGTA TCTCAGTTTC TCTCTTTTTT ACACACACAA 60
ATTAAAATTA AACAAACAAA AAAATAAGGC CGCTAACCTG GCTAGAATCG GCCCCGAGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0000118--C:histone deacetylase complex
GO:0003682--F:chromatin binding
GO:0042393--F:histone binding
GO:0000977--F:RNA polymerase II regulatory region sequence-specific DNA binding
GO:0003712--F:transcription cofactor activity
GO:0008270--F:zinc ion binding
GO:0060324--P:face development
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001656	Ailuropoda melanoleuca	53.64	3.00e-143	502.00
IUUC-Apl-003874	Anas platyrhynchos	57.83	2.00e-166	579.00
IUUC-Aca-004684	Anolis carolinensis	66.33	3.00e-134	471.00
IUUC-Ame-010638	Astyanax mexicanus	74.04	0.00e+00	917.00
IUUC-Bta-013460	Bos taurus	52.47	9.00e-142	497.00
IUUC-Cja-019170	Callithrix jacchus	57.32	2.00e-176	612.00
IUUC-Cfa-020760	Canis familiaris	57.01	3.00e-172	598.00
IUUC-Cpo-021549	Cavia porcellus	57.62	1.00e-165	577.00
IUUC-Csa-023461	Chlorocebus sabaeus	56.59	4.00e-159	554.00
IUUC-Dno-029450	Dasypus novemcinctus	53.71	3.00e-144	505.00
IUUC-Dor-030699	Dipodomys ordii	57.32	1.00e-171	596.00
IUUC-Ete-033073	Echinops telfairi	55.06	6.00e-107	382.00
IUUC-Eca-033822	Equus caballus	53.58	2.00e-142	499.00
IUUC-Fca-035562	Felis catus	56.86	2.00e-170	593.00
IUUC-Fal-037269	Ficedula albicollis	59.39	0.00e+00	630.00
IUUC-Gmo-038592	Gadus morhua	57.60	2.00e-143	503.00
IUUC-Gga-040795	Gallus gallus	59.67	0.00e+00	633.00
IUUC-Gac-042224	Gasterosteus aculeatus	60.03	2.00e-169	589.00
IUUC-Ggo-045327	Gorilla gorilla	56.93	2.00e-175	608.00
IUUC-Hsa-046675	Homo sapiens	57.16	1.00e-175	609.00
IUUC-Itr-048946	Ictidomys tridecemlineatus	74.24	1.00e-115	409.00
IUUC-Lch-050609	Latimeria chalumnae	60.55	2.00e-157	549.00
IUUC-Loc-052407	Lepisosteus oculatus	65.70	0.00e+00	671.00
IUUC-Laf-053876	Loxodonta africana	53.14	1.00e-141	496.00
IUUC-Mcc-054954	Macaca mulatta	54.39	2.00e-163	569.00
IUUC-Meu-056821	Macropus eugenii	49.25	3.00e-145	509.00
IUUC-Mtr-058324	Medicago truncatula	35.23	5.00e-11	63.50
IUUC-Mga-059320	Meleagris gallopavo	58.29	8.00e-170	590.00
IUUC-Mmr-061278	Microcebus murinus	53.64	8.00e-153	534.00
IUUC-Mdo-062891	Monodelphis domestica	57.21	1.00e-171	597.00
IUUC-Mmu-063907	Mus musculus	55.15	2.00e-137	483.00
IUUC-Mac-065599	Musa acuminata	36.36	6.00e-12	66.60
IUUC-Mpu-065839	Mustela putorius furo	57.56	9.00e-169	587.00
IUUC-Mlu-068142	Myotis lucifugus	57.10	2.00e-172	599.00
IUUC-Nle-069423	Nomascus leucogenys	56.77	7.00e-175	607.00
IUUC-Opr-070236	Ochotona princeps	56.53	1.00e-134	473.00
IUUC-Ont-071327	Oreochromis niloticus	75.78	4.00e-109	389.00
IUUC-Oan-073405	Ornithorhynchus anatinus	56.79	7.00e-143	500.00
IUUC-Ocu-074391	Oryctolagus cuniculus	55.47	2.00e-169	589.00
IUUC-Ola-086548	Oryzias latipes	60.12	4.00e-175	608.00
IUUC-Oga-088488	Otolemur garnettii	56.15	7.00e-173	600.00
IUUC-Oar-090334	Ovis aries	58.08	2.00e-171	595.00
IUUC-Ptr-091018	Pan troglodytes	57.16	1.00e-175	609.00
IUUC-Psi-093596	Pelodiscus sinensis	58.43	3.00e-142	498.00
IUUC-Pma-094616	Petromyzon marinus	61.92	6.00e-92	330.00
IUUC-Pfo-097233	Poecilia formosa	59.78	1.00e-166	579.00
IUUC-Pab-097801	Pongo abelii	56.93	3.00e-175	608.00
IUUC-Pop-099691	Populus trichocarpa	38.20	1.00e-10	62.00
IUUC-Ppe-101956	Prunus persica	40.91	1.00e-13	72.00
IUUC-Pva-102419	Pteropus vampyrus	57.01	1.00e-172	600.00
IUUC-Rno-104900	Rattus norvegicus	55.13	4.00e-169	588.00
IUUC-Sha-107328	Sarcophilus harrisii	55.47	5.00e-163	568.00
IUUC-Sar-113573	Sorex araneus	62.60	5.00e-122	431.00
IUUC-Ssc-115924	Sus scrofa	54.65	6.00e-139	487.00
IUUC-Tgu-117422	Taeniopygia guttata	59.63	0.00e+00	633.00
IUUC-Tru-118697	Takifugu rubripes	59.69	7.00e-126	444.00
IUUC-Tsy-119092	Tarsius syrichta	74.24	2.00e-115	409.00
IUUC-Tni-120185	Tetraodon nigroviridis	53.50	2.00e-136	479.00
IUUC-Tca-121730	Theobroma cacao	38.64	4.00e-11	63.90
IUUC-Ttr-128860	Tursiops truncatus	57.86	5.00e-171	594.00
IUUC-Vpa-130333	Vicugna pacos	55.79	9.00e-166	577.00
IUUC-Xtr-131763	Xenopus tropicalis	73.96	3.00e-72	266.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence