iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131683

UUCD1 version

UUC-ViV-00243

Ensembl Protein ID

VIT_10s0003g04610.t01

UniProt Accession

D7TKH3; D7TKH3_VITVI

Genbank Protein ID

CBI30995.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595992

Gene Name

VIT_10s0003g04610

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_10s0003g04610	VIT_10s0003g04610.t01	VIT_10s0003g04610.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-32	110.5	265	295
UBD/Beta-Prp	3.70e-40	138.5	148	377

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH ++v+cl f ++   l sGs D tik+W+
   Q: 265  GHRGPVSCLTFrQGtSELFSGSFDRTIKIWS 295
           8**********955578*************8 PP

UBD/Beta-Prp

   S: 78   vwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee..................tlsghdgvvncvvvhp 147
           v  ++t + +++l +h +sv+++++s+++ k  s+s+d ti  wd+++g+  +                      +h++ v  ++v++
   Q: 148  VQKPETVDEFRVLVKHRQSVTAVALSEDDLKGFSASKDGTIVQWDVDSGKGEKYmwpteevlkshgakdpqgRAMKHSKHVLALAVSS 235
           55678888999999************************************998899***************999************** PP
   S: 148  dgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnde 235
           dg++l+sG+ Dr v lWd +t + lr + g h ++v +l+f++   el sgs d+t+k+w+ +    + +l gh++ v+s++ + ++e
   Q: 236  DGRYLASGGFDRHVHLWDTRTREHLRAFPG-HRGPVSCLTFRQGTSELFSGSFDRTIKIWSAEDRAYITSLFGHQSEVLSIDCL-RKE 321
           *****************************9.*****************************************************.9** PP
   S: 236  rlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedskvniwkl 294
           r+++++ D+s ++W +   +   ++  ++ss+ ++++  +++ ++++gs+d+++++w +
   Q: 322  RVLTVGRDRSMQLW-KVPEESRLVFRAPASSLECCCF--INNDEFLSGSDDGSIELWGM 377
           **************.7889999***************..******************76 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MKVKTSKKKV SVSKGTRKGK RFSIDEDSFF RHESKRRRKA KDEDAEDDII ESEEEDDEEG 60
TGSDADGLEE RQEEDEFAAE TADEKRLRVA KAYVEKIRGI VSREREDEEE SERAEEREGQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACATTTACCC CACCAAAACT TCTCTCTGCT GATACAGCAA CTGTTCAAAT TTCTAAACAC 60
TGATCATGAA GGTCAAAACT TCGAAGAAGA AAGTTTCAGT TTCCAAGGGA ACCAGAAAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0006364--P:rRNA processing

KEGG

vvi:100248133

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000586	Aegilops tauschii	54.42	1.00e-124	438.00
IUUC-Aml-002072	Ailuropoda melanoleuca	40.25	4.00e-82	297.00
IUUC-Atr-002824	Amborella trichopoda	60.04	3.00e-163	567.00
IUUC-Apl-003264	Anas platyrhynchos	40.58	2.00e-82	298.00
IUUC-Aca-004898	Anolis carolinensis	41.46	1.00e-89	322.00
IUUC-Aly-005535	Arabidopsis lyrata	63.04	2.00e-144	504.00
IUUC-Ath-007003	Arabidopsis thaliana	63.04	2.00e-143	501.00
IUUC-Ago-007710	Ashbya gossypii	25.94	2.00e-43	169.00
IUUC-Acl-008345	Aspergillus clavatus	30.00	6.00e-42	164.00
IUUC-Afl-008718	Aspergillus flavus	28.26	7.00e-43	167.00
IUUC-Afu-008966	Aspergillus fumigatus	29.19	6.00e-41	161.00
IUUC-Ani-009214	Aspergillus nidulans	30.47	4.00e-46	178.00
IUUC-Ang-009774	Aspergillus niger	30.68	1.00e-46	180.00
IUUC-Aor-009956	Aspergillus oryzae	28.26	7.00e-43	167.00
IUUC-Ate-010449	Aspergillus terreus	30.75	6.00e-44	171.00
IUUC-Ame-011860	Astyanax mexicanus	40.67	2.00e-91	328.00
IUUC-Bgr-012213	Blumeria graminis	29.90	4.00e-52	198.00
IUUC-Bta-012698	Bos taurus	40.76	3.00e-84	304.00
IUUC-Bci-013973	Botrytis cinerea	32.64	4.00e-52	198.00
IUUC-Bdi-014790	Brachypodium distachyon	59.64	5.00e-136	476.00
IUUC-Bol-016068	Brassica oleracea	62.03	9.00e-142	496.00
IUUC-Bra-017410	Brassica rapa	61.27	2.00e-134	471.00
IUUC-Cel-018616	Caenorhabditis elegans	31.92	1.00e-55	209.00
IUUC-Cja-019532	Callithrix jacchus	37.95	6.00e-83	300.00
IUUC-Cfa-020961	Canis familiaris	37.91	1.00e-78	286.00
IUUC-Cpo-021527	Cavia porcellus	40.25	3.00e-82	298.00
IUUC-Csa-023106	Chlorocebus sabaeus	40.15	7.00e-83	300.00
IUUC-Cin-025670	Ciona intestinalis	36.02	1.00e-79	289.00
IUUC-Csv-026172	Ciona savignyi	36.32	7.00e-77	280.00
IUUC-Cgl-026619	Colletotrichum gloeosporioides	30.02	9.00e-51	193.00
IUUC-Cne-027070	Cryptococcus neoformans	27.93	2.00e-38	152.00
IUUC-Cme-027125	Cyanidioschyzon merolae	27.17	2.00e-35	142.00
IUUC-Dre-027919	Danio rerio	41.01	1.00e-90	325.00
IUUC-Dno-029684	Dasypus novemcinctus	39.57	3.00e-58	218.00
IUUC-Dor-030363	Dipodomys ordii	39.37	3.00e-41	161.00
IUUC-Dse-031503	Dothistroma septosporum	30.59	8.00e-43	167.00
IUUC-Dme-031979	Drosophila melanogaster	34.90	3.00e-70	258.00
IUUC-Eca-033735	Equus caballus	39.75	8.00e-81	293.00
IUUC-Fca-036193	Felis catus	38.41	4.00e-81	294.00
IUUC-Fal-037058	Ficedula albicollis	40.68	9.00e-87	313.00
IUUC-Fox-038036	Fusarium oxysporum	30.72	7.00e-55	207.00
IUUC-Fso-038298	Fusarium solani	31.46	3.00e-54	205.00
IUUC-Gmo-038796	Gadus morhua	39.64	4.00e-72	264.00
IUUC-Ggr-040074	Gaeumannomyces graminis	28.86	5.00e-49	188.00
IUUC-Gga-040743	Gallus gallus	40.74	8.00e-70	256.00
IUUC-Gac-042583	Gasterosteus aculeatus	37.73	8.00e-88	316.00
IUUC-Gma-042659	Glycine max	74.25	7.00e-180	622.00
IUUC-Ggo-045543	Gorilla gorilla	40.15	4.00e-84	304.00
IUUC-Hsa-047017	Homo sapiens	40.15	2.00e-83	302.00
IUUC-Hvu-047173	Hordeum vulgare	61.42	1.00e-141	495.00
IUUC-Itr-048062	Ictidomys tridecemlineatus	40.15	6.00e-85	306.00
IUUC-Kpa-049262	Komagataella pastoris	25.61	6.00e-39	154.00
IUUC-Lch-050566	Latimeria chalumnae	41.62	2.00e-80	291.00
IUUC-Lpe-051651	Leersia perrieri	59.63	8.00e-143	499.00
IUUC-Loc-051997	Lepisosteus oculatus	41.27	7.00e-89	320.00
IUUC-Lma-053182	Leptosphaeria maculans	26.58	6.00e-38	151.00
IUUC-Laf-054105	Loxodonta africana	39.39	9.00e-82	296.00
IUUC-Mcc-055215	Macaca mulatta	39.90	7.00e-83	300.00
IUUC-Meu-055943	Macropus eugenii	38.85	2.00e-78	285.00
IUUC-Mor-057069	Magnaporthe oryzae	29.09	1.00e-49	190.00
IUUC-Mpo-057358	Magnaporthe poae	28.48	1.00e-46	180.00
IUUC-Mtr-058209	Medicago truncatula	71.43	5.00e-175	606.00
IUUC-Mla-059043	Melampsora laricipopulina	24.37	6.00e-35	141.00
IUUC-Mga-060024	Meleagris gallopavo	39.60	2.00e-77	281.00
IUUC-Mvi-060371	Microbotryum violaceum	28.60	2.00e-52	199.00
IUUC-Mmr-061403	Microcebus murinus	39.09	7.00e-86	310.00
IUUC-Mdo-063026	Monodelphis domestica	39.10	9.00e-82	296.00
IUUC-Mmu-063646	Mus musculus	41.16	1.00e-86	312.00
IUUC-Mac-064801	Musa acuminata	70.27	9.00e-171	592.00
IUUC-Mpu-065760	Mustela putorius furo	40.00	7.00e-82	296.00
IUUC-Mlu-067963	Myotis lucifugus	40.40	8.00e-83	299.00
IUUC-Nfi-068288	Neosartorya fischeri	29.93	8.00e-42	164.00
IUUC-Ncr-068679	Neurospora crassa	30.84	1.00e-45	177.00
IUUC-Nle-069766	Nomascus leucogenys	41.64	3.00e-68	251.00
IUUC-Opr-070906	Ochotona princeps	39.90	9.00e-84	303.00
IUUC-Ont-071661	Oreochromis niloticus	41.31	6.00e-88	317.00
IUUC-Oan-073465	Ornithorhynchus anatinus	33.19	3.00e-58	218.00
IUUC-Ocu-074263	Oryctolagus cuniculus	40.15	8.00e-83	300.00
IUUC-Oba-075607	Oryza barthii	61.17	9.00e-128	449.00
IUUC-Obr-076581	Oryza brachyantha	62.68	2.00e-46	178.00
IUUC-Ogl-077387	Oryza glaberrima	60.97	6.00e-137	479.00
IUUC-Ogu-078323	Oryza glumaepatula	60.97	5.00e-134	470.00
IUUC-Oin-079977	Oryza indica	55.30	2.00e-104	371.00
IUUC-Olo-080857	Oryza longistaminata	60.76	2.00e-134	471.00
IUUC-Ome-081568	Oryza meridionalis	58.62	6.00e-136	476.00
IUUC-Oni-082685	Oryza nivara	61.48	1.00e-139	488.00
IUUC-Opu-084049	Oryza punctata	61.48	3.00e-135	474.00
IUUC-Oru-084348	Oryza rufipogon	61.48	1.00e-139	488.00
IUUC-Osa-086076	Oryza sativa	61.48	1.00e-139	488.00
IUUC-Ola-086991	Oryzias latipes	41.06	2.00e-87	315.00
IUUC-Olu-087891	Ostreococcus lucimarinus	40.23	1.00e-84	305.00
IUUC-Oga-088991	Otolemur garnettii	40.66	1.00e-83	302.00
IUUC-Oar-090430	Ovis aries	39.64	9.00e-84	303.00
IUUC-Ptr-091359	Pan troglodytes	40.15	7.00e-84	303.00
IUUC-Pan-092499	Papio anubis	39.65	3.00e-82	298.00
IUUC-Pma-094447	Petromyzon marinus	34.76	9.00e-63	233.00
IUUC-Pno-095008	Phaeosphaeria nodorum	27.51	3.00e-40	159.00
IUUC-Ppa-095680	Physcomitrella patens	54.39	2.00e-130	458.00
IUUC-Pfo-096430	Poecilia formosa	41.46	2.00e-89	322.00
IUUC-Pab-097649	Pongo abelii	40.40	7.00e-84	303.00
IUUC-Pop-100055	Populus trichocarpa	72.80	4.00e-174	603.00
IUUC-Pca-100317	Procavia capensis	43.05	8.00e-35	140.00
IUUC-Ppe-101999	Prunus persica	71.34	0.00e+00	681.00
IUUC-Pva-103046	Pteropus vampyrus	39.90	6.00e-82	296.00
IUUC-Pgr-103655	Puccinia graminis	30.63	3.00e-34	139.00
IUUC-Ptt-103812	Puccinia triticina	26.03	2.00e-31	129.00
IUUC-Pte-104243	Pyrenophora teres	27.41	2.00e-36	146.00
IUUC-Pyt-104512	Pyrenophora triticirepentis	27.43	2.00e-37	149.00
IUUC-Rno-104973	Rattus norvegicus	40.91	8.00e-87	313.00
IUUC-Sce-106329	Saccharomyces cerevisiae	27.76	2.00e-34	139.00
IUUC-Sha-106941	Sarcophilus harrisii	40.40	7.00e-83	300.00
IUUC-Sja-107821	Schizosaccharomyces japonicus	29.40	9.00e-53	200.00
IUUC-Spo-108329	Schizosaccharomyces pombe	30.39	2.00e-57	215.00
IUUC-Ssl-108552	Sclerotinia sclerotiorum	28.63	7.00e-53	201.00
IUUC-Smo-109659	Selaginella moellendorffii	51.66	3.00e-104	370.00
IUUC-Sit-109694	Setaria italica	64.30	1.00e-146	511.00
IUUC-Sly-111294	Solanum lycopersicum	74.19	3.00e-176	610.00
IUUC-Stu-112747	Solanum tuberosum	73.93	3.00e-177	613.00
IUUC-Sar-113315	Sorex araneus	39.60	2.00e-24	106.00
IUUC-Sbi-114694	Sorghum bicolor	60.46	8.00e-146	509.00
IUUC-Sre-114937	Sporisorium reilianum	28.63	3.00e-50	192.00
IUUC-Ssc-116127	Sus scrofa	40.25	1.00e-82	299.00
IUUC-Tgu-117242	Taeniopygia guttata	37.93	7.00e-52	196.00
IUUC-Tru-118285	Takifugu rubripes	40.37	4.00e-90	324.00
IUUC-Tni-120368	Tetraodon nigroviridis	40.60	6.00e-91	327.00
IUUC-Tca-121724	Theobroma cacao	68.45	0.00e+00	632.00
IUUC-Tre-122106	Trichoderma reesei	31.03	6.00e-52	197.00
IUUC-Tvi-122526	Trichoderma virens	29.59	2.00e-51	196.00
IUUC-Tae-122939	Triticum aestivum	58.50	5.00e-142	496.00
IUUC-Tur-126548	Triticum urartu	58.50	1.00e-141	495.00
IUUC-Tme-126985	Tuber melanosporum	29.51	6.00e-54	204.00
IUUC-Tbe-127923	Tupaia belangeri	40.00	4.00e-82	297.00
IUUC-Ttr-129308	Tursiops truncatus	37.97	3.00e-75	275.00
IUUC-Uma-129472	Ustilago maydis	29.38	1.00e-43	170.00
IUUC-Vda-129910	Verticillium dahliae	28.42	3.00e-50	192.00
IUUC-Xtr-132118	Xenopus tropicalis	39.06	4.00e-83	300.00
IUUC-Xma-133804	Xiphophorus maculatus	40.70	2.00e-88	318.00
IUUC-Yli-134639	Yarrowia lipolytica	28.51	6.00e-45	174.00
IUUC-Zma-135779	Zea mays	63.57	4.00e-139	487.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence