iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112882

Ensembl Protein ID

PGSC0003DMT400034706

UniProt Accession

M1B157; M1B157_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400013334	PGSC0003DMT400034704	PGSC0003DMT400034704
PGSC0003DMG400013334	PGSC0003DMT400034705	PGSC0003DMT400034705
PGSC0003DMG400013334	PGSC0003DMT400034706	PGSC0003DMT400034706

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.60e-07	31.4	59	118
E3 adaptor/Cullin RING/DCX/DWD	6.10e-27	93.8	561	598

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrl 64
           ++ lCpI +++ +d   +++G+++   +I  +l+++   cP +++ lt + l Pn  l +l
   Q: 59   KDILCPICMQIIKDAFLTACGHSFCYMCIVTHLQNKSD-CPCCSHYLTTNHLYPNFLLNKL 118
           6789*********************************9.****************988665 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvllk 37
           gH   v+ ++f s+  l+s+s D t+++WD+ ++v+l+
   Q: 561  GHRKAVSYVKFlSNYELASASTDSTLRLWDVNENVPLR 598
           79999******98788***************9999887 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MGGGGERNSM GVLVPTVNAG ETSAPAGAET EAAVVGTEVV VVTERVAEEE EEEEEEVDKD 60
ILCPICMQII KDAFLTACGH SFCYMCIVTH LQNKSDCPCC SHYLTTNHLY PNFLLNKLLM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACACTAACA AGTCTCTCCA GTTTTGAAAA ACACCCGTTC CCCGCCAACG TGGTTCTTTT 60
ATACCCTCAC AAAAATACAA CAAACAACAA AAAAAGAAAT CACACATACA GTAATCATCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00400--WD40

SMART

SM00184--RING
SM00320--WD40

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

sot:102605430

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000885	Aegilops tauschii	69.24	0.00e+00	897.00
IUUC-Aml-001265	Ailuropoda melanoleuca	40.52	7.00e-131	459.00
IUUC-Apl-003796	Anas platyrhynchos	40.22	9.00e-125	439.00
IUUC-Aca-005078	Anolis carolinensis	40.25	3.00e-129	454.00
IUUC-Ame-011176	Astyanax mexicanus	61.16	5.00e-42	164.00
IUUC-Bta-012595	Bos taurus	40.58	2.00e-131	462.00
IUUC-Cja-018926	Callithrix jacchus	40.58	1.00e-131	462.00
IUUC-Cfa-021088	Canis familiaris	40.58	2.00e-131	461.00
IUUC-Cpo-022442	Cavia porcellus	40.32	1.00e-125	442.00
IUUC-Csa-024119	Chlorocebus sabaeus	40.49	7.00e-131	460.00
IUUC-Cin-025375	Ciona intestinalis	38.67	3.00e-116	411.00
IUUC-Cme-027350	Cyanidioschyzon merolae	45.18	3.00e-94	338.00
IUUC-Dre-028453	Danio rerio	40.65	3.00e-127	448.00
IUUC-Dno-029887	Dasypus novemcinctus	40.58	1.00e-130	459.00
IUUC-Eca-034403	Equus caballus	40.06	2.00e-124	438.00
IUUC-Fca-036475	Felis catus	40.38	3.00e-125	441.00
IUUC-Fal-037189	Ficedula albicollis	40.46	2.00e-130	457.00
IUUC-Gmo-039245	Gadus morhua	40.00	3.00e-124	437.00
IUUC-Gga-040806	Gallus gallus	40.28	2.00e-130	458.00
IUUC-Gac-042177	Gasterosteus aculeatus	39.69	6.00e-127	447.00
IUUC-Ggo-044430	Gorilla gorilla	37.88	9.00e-85	306.00
IUUC-Hsa-045853	Homo sapiens	40.58	2.00e-131	461.00
IUUC-Itr-048238	Ictidomys tridecemlineatus	55.51	2.00e-72	263.00
IUUC-Lch-050420	Latimeria chalumnae	41.08	2.00e-128	451.00
IUUC-Lpe-051219	Leersia perrieri	70.47	0.00e+00	897.00
IUUC-Loc-052728	Lepisosteus oculatus	40.68	8.00e-121	426.00
IUUC-Laf-053775	Loxodonta africana	40.37	6.00e-131	460.00
IUUC-Meu-056595	Macropus eugenii	42.55	4.00e-59	221.00
IUUC-Mla-059097	Melampsora laricipopulina	26.51	2.00e-14	74.30
IUUC-Mga-059646	Meleagris gallopavo	40.06	2.00e-124	437.00
IUUC-Mmr-060990	Microcebus murinus	40.52	8.00e-131	459.00
IUUC-Mdo-062287	Monodelphis domestica	40.43	4.00e-131	461.00
IUUC-Mmu-064097	Mus musculus	40.74	5.00e-132	464.00
IUUC-Mpu-066612	Mustela putorius furo	40.38	9.00e-126	442.00
IUUC-Mlu-067967	Myotis lucifugus	40.26	9.00e-124	436.00
IUUC-Nle-069543	Nomascus leucogenys	40.58	2.00e-131	461.00
IUUC-Opr-070366	Ochotona princeps	45.41	2.00e-45	176.00
IUUC-Ont-071522	Oreochromis niloticus	40.09	5.00e-127	447.00
IUUC-Oan-073409	Ornithorhynchus anatinus	40.16	2.00e-123	434.00
IUUC-Ocu-073756	Oryctolagus cuniculus	40.45	3.00e-127	447.00
IUUC-Oba-075149	Oryza barthii	67.06	0.00e+00	915.00
IUUC-Obr-076563	Oryza brachyantha	70.52	0.00e+00	911.00
IUUC-Ogl-077701	Oryza glaberrima	67.40	0.00e+00	918.00
IUUC-Ogu-078383	Oryza glumaepatula	67.40	0.00e+00	918.00
IUUC-Oin-079965	Oryza indica	66.82	0.00e+00	836.00
IUUC-Oni-082622	Oryza nivara	67.40	0.00e+00	918.00
IUUC-Oru-084661	Oryza rufipogon	67.40	0.00e+00	918.00
IUUC-Osa-085766	Oryza sativa	67.40	0.00e+00	918.00
IUUC-Ola-086727	Oryzias latipes	39.63	4.00e-128	450.00
IUUC-Oga-088215	Otolemur garnettii	40.45	3.00e-127	447.00
IUUC-Oar-089880	Ovis aries	40.45	4.00e-127	447.00
IUUC-Ptr-090597	Pan troglodytes	40.58	2.00e-131	461.00
IUUC-Pan-091987	Papio anubis	40.58	1.00e-131	462.00
IUUC-Psi-094033	Pelodiscus sinensis	40.19	2.00e-126	445.00
IUUC-Pma-094587	Petromyzon marinus	40.59	2.00e-112	398.00
IUUC-Pab-098029	Pongo abelii	40.58	2.00e-131	461.00
IUUC-Pca-100846	Procavia capensis	48.16	8.00e-106	376.00
IUUC-Ppe-101250	Prunus persica	66.33	0.00e+00	878.00
IUUC-Pva-102407	Pteropus vampyrus	40.43	6.00e-128	450.00
IUUC-Rno-105312	Rattus norvegicus	40.58	2.00e-131	461.00
IUUC-Sha-106514	Sarcophilus harrisii	48.37	3.00e-101	360.00
IUUC-Smo-109418	Selaginella moellendorffii	62.48	0.00e+00	764.00
IUUC-Sit-110248	Setaria italica	71.79	0.00e+00	927.00
IUUC-Sly-110964	Solanum lycopersicum	93.19	0.00e+00	1249.00
IUUC-Ssc-115987	Sus scrofa	29.65	1.00e-32	132.00
IUUC-Tgu-116471	Taeniopygia guttata	40.22	7.00e-130	456.00
IUUC-Tru-118231	Takifugu rubripes	40.31	3.00e-121	428.00
IUUC-Tsy-119415	Tarsius syrichta	39.81	5.00e-123	433.00
IUUC-Tni-120893	Tetraodon nigroviridis	39.63	1.00e-119	422.00
IUUC-Tca-121703	Theobroma cacao	76.83	0.00e+00	982.00
IUUC-Tae-125524	Triticum aestivum	70.48	0.00e+00	924.00
IUUC-Tur-126557	Triticum urartu	69.87	0.00e+00	897.00
IUUC-Ttr-129100	Tursiops truncatus	40.44	1.00e-123	435.00
IUUC-Vpa-130613	Vicugna pacos	36.21	7.00e-107	380.00
IUUC-Vvi-130880	Vitis vinifera	77.85	0.00e+00	960.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence