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Tag Content
UUCD2 ID IUUC-Ssc-115705
UUCD1 version UUC-SuS-00228
Ensembl Protein ID ENSSSCP00000013431.2
UniProt Accession F1RU80; F1RU80_PIG
Genbank Protein ID ENSSSCP00000013431
Protein Name Uncharacterized protein
Genbank Nucleotide ID CU928929
Gene Name LONRF3
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSSSCG00000012631.3 ENSSSCT00000013812.3 ENSSSCP00000013431.2
ENSSSCG00000012631.3 ENSSSCT00000035094.1 ENSSSCP00000028500.1
ENSSSCG00000012631.3 ENSSSCT00000036557.1 ENSSSCP00000030758.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/RING 3.70e-08 34.1 460 498
E3 activity/RING/U-box 3.60e-11 43.3 457 524
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING
   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C+  f + p+++pCgH+f+++Cl++          +++CPlC+
   Q: 460  CSLCMRLFYE-PVTTPCGHTFCLKCLERC------LDHNAKCPLCK 498
           ****999977.***************999......9*********7 PP
   

   E3 activity/RING/U-box
   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpl....teedlvPnltlrrliqawc 69
           ++ C++ + l+ +Pv++p+G+t+  +++e++l+++ k cP+++  l    ++++   n  + +li +++
   Q: 457  DLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAK-CPLCKDGLsqclASRKYSKNVIMEELIAKFL 524
           678*********************************9.****876633336777788888888887776 PP
   
Organism Sus scrofa
Protein Sequence
(Fasta)
MDSFQTGQML SLPAELGSNN LELAEPAASA ARGDTGPHPE AAREGPAPLP TRPPGQEQPP 60
RASTPECKVL LKQADALASG GRLREALEVY RQLSERQQLV AEQLEQLVRC LAENVPRGEA 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ssc-115705|E3,RING;E3,U-box|Sus scrofa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TATTAGGCGG CGCGGGGCAG CAGGCATGGA GCTCGCAGAG GCGCGGCGGG GAGCGGCGCG 60
CGGCAGAGCG GCGGCCGTGG CAGCCCCGAT TCCCTCCAGC CGCCGCTCCC TGCTCCGCGT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ssc-115705|E3,RING;E3,U-box|Sus scrofa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0802--TPR repeat
Interpro

IPR023114--Elongated_TPR_rpt_dom
IPR003111--Lon_substr-bd
IPR015947--PUA-like_domain
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
PROSITE

PS51787--LON_N
PS50005--TPR
PS50293--TPR_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2
Pfam

PF02190--LON_substr_bdg
SMART

SM00464--LON
SM00184--RING
SM00028--TPR
Gene Ontology

GO:0005622--C:intracellular
GO:0031624--F:ubiquitin conjugating enzyme binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0032436--P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000755 Aegilops tauschii 28.42 8.00e-11 61.60
IUUC-Aml-001774 Ailuropoda melanoleuca 78.91 0.00e+00 1022.00
IUUC-Apl-003916 Anas platyrhynchos 62.52 0.00e+00 641.00
IUUC-Aca-004822 Anolis carolinensis 48.17 1.00e-169 589.00
IUUC-Ago-007876 Ashbya gossypii 36.49 5.00e-09 55.50
IUUC-Ani-009473 Aspergillus nidulans 30.68 8.00e-43 168.00
IUUC-Ame-010750 Astyanax mexicanus 45.16 2.00e-165 576.00
IUUC-Bta-012872 Bos taurus 92.50 0.00e+00 1208.00
IUUC-Cel-018356 Caenorhabditis elegans 30.12 4.00e-10 57.00
IUUC-Cja-018747 Callithrix jacchus 81.02 0.00e+00 1045.00
IUUC-Cfa-020101 Canis familiaris 85.49 0.00e+00 1145.00
IUUC-Cpo-022041 Cavia porcellus 78.44 0.00e+00 1008.00
IUUC-Csa-024034 Chlorocebus sabaeus 88.04 0.00e+00 1202.00
IUUC-Cin-025668 Ciona intestinalis 45.70 5.00e-80 291.00
IUUC-Csv-026364 Ciona savignyi 45.87 1.00e-79 289.00
IUUC-Dre-028400 Danio rerio 50.82 6.00e-143 500.00
IUUC-Dno-029518 Dasypus novemcinctus 79.77 0.00e+00 1037.00
IUUC-Dor-031132 Dipodomys ordii 70.73 0.00e+00 978.00
IUUC-Dse-031331 Dothistroma septosporum 31.91 6.00e-39 154.00
IUUC-Eca-033382 Equus caballus 92.76 0.00e+00 1281.00
IUUC-Fca-035777 Felis catus 78.53 0.00e+00 744.00
IUUC-Fal-036730 Ficedula albicollis 61.70 0.00e+00 661.00
IUUC-Fox-037868 Fusarium oxysporum 35.63 1.00e-10 60.80
IUUC-Gmo-039110 Gadus morhua 50.22 7.00e-179 620.00
IUUC-Gga-041187 Gallus gallus 57.44 0.00e+00 830.00
IUUC-Gac-042201 Gasterosteus aculeatus 50.95 0.00e+00 656.00
IUUC-Ggo-045111 Gorilla gorilla 87.91 0.00e+00 1198.00
IUUC-Hsa-045695 Homo sapiens 87.78 0.00e+00 1196.00
IUUC-Itr-048224 Ictidomys tridecemlineatus 47.35 7.00e-126 443.00
IUUC-Lch-050429 Latimeria chalumnae 53.21 0.00e+00 745.00
IUUC-Loc-051823 Lepisosteus oculatus 77.59 4.00e-140 491.00
IUUC-Lma-053145 Leptosphaeria maculans 32.28 7.00e-42 164.00
IUUC-Laf-053434 Loxodonta africana 88.04 0.00e+00 898.00
IUUC-Mcc-055249 Macaca mulatta 80.79 0.00e+00 761.00
IUUC-Mga-060131 Meleagris gallopavo 63.10 0.00e+00 633.00
IUUC-Mmr-060749 Microcebus murinus 89.02 0.00e+00 1231.00
IUUC-Mdo-062261 Monodelphis domestica 56.70 0.00e+00 751.00
IUUC-Mmu-063219 Mus musculus 81.58 0.00e+00 1097.00
IUUC-Mpu-066222 Mustela putorius furo 78.11 0.00e+00 1025.00
IUUC-Mlu-067769 Myotis lucifugus 85.81 0.00e+00 1147.00
IUUC-Nle-069738 Nomascus leucogenys 90.94 0.00e+00 976.00
IUUC-Ont-072029 Oreochromis niloticus 56.24 3.00e-173 601.00
IUUC-Oan-073179 Ornithorhynchus anatinus 80.23 6.00e-170 590.00
IUUC-Ocu-074884 Oryctolagus cuniculus 84.53 0.00e+00 1108.00
IUUC-Ogl-077658 Oryza glaberrima 32.98 1.00e-11 63.50
IUUC-Ome-081482 Oryza meridionalis 32.35 2.00e-11 62.80
IUUC-Osa-085978 Oryza sativa 32.35 1.00e-11 63.50
IUUC-Ola-086698 Oryzias latipes 49.44 0.00e+00 629.00
IUUC-Oga-089109 Otolemur garnettii 84.61 0.00e+00 1129.00
IUUC-Oar-089903 Ovis aries 92.76 0.00e+00 1244.00
IUUC-Ptr-091238 Pan troglodytes 87.22 0.00e+00 1182.00
IUUC-Pan-092379 Papio anubis 82.53 0.00e+00 1186.00
IUUC-Psi-093418 Pelodiscus sinensis 61.94 0.00e+00 723.00
IUUC-Pma-094231 Petromyzon marinus 63.24 2.00e-109 388.00
IUUC-Pno-094889 Phaeosphaeria nodorum 39.62 4.00e-42 165.00
IUUC-Pfo-097284 Poecilia formosa 49.64 5.00e-180 624.00
IUUC-Pab-098343 Pongo abelii 81.80 0.00e+00 1165.00
IUUC-Pca-100905 Procavia capensis 83.61 0.00e+00 998.00
IUUC-Pva-102242 Pteropus vampyrus 85.17 0.00e+00 1134.00
IUUC-Ptt-103898 Puccinia triticina 26.94 1.00e-29 124.00
IUUC-Pte-104214 Pyrenophora teres 31.18 2.00e-40 160.00
IUUC-Pyt-104565 Pyrenophora triticirepentis 31.56 8.00e-40 157.00
IUUC-Rno-105899 Rattus norvegicus 77.64 0.00e+00 1098.00
IUUC-Sha-107565 Sarcophilus harrisii 51.00 0.00e+00 684.00
IUUC-Sja-107742 Schizosaccharomyces japonicus 36.89 6.00e-31 128.00
IUUC-Spo-108344 Schizosaccharomyces pombe 34.01 2.00e-24 106.00
IUUC-Stu-112446 Solanum tuberosum 36.36 4.00e-11 62.00
IUUC-Sar-112999 Sorex araneus 63.29 0.00e+00 652.00
IUUC-Sre-114977 Sporisorium reilianum 33.33 9.00e-37 149.00
IUUC-Tgu-116978 Taeniopygia guttata 65.17 0.00e+00 792.00
IUUC-Tsy-118988 Tarsius syrichta 91.22 0.00e+00 921.00
IUUC-Tni-119913 Tetraodon nigroviridis 46.40 6.00e-161 560.00
IUUC-Tbe-127563 Tupaia belangeri 69.61 6.00e-140 489.00
IUUC-Ttr-128875 Tursiops truncatus 91.71 0.00e+00 1142.00
IUUC-Uma-129541 Ustilago maydis 46.40 4.00e-30 127.00
IUUC-Vpa-130779 Vicugna pacos 98.61 3.00e-163 568.00
IUUC-Xtr-132508 Xenopus tropicalis 52.72 0.00e+00 728.00
Created Date 25-Jun-2017

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