iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cja-019849

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACFV01144367

Gene Name

RAB40B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000017902.2	ENSCJAT00000034922.2	ENSCJAP00000033047.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	4.20e-13	49.9	136	180

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box

   S: 4    lwllrseprSLqhLCRlaIrrclgsqrlkaidkLPLPksLkdYLlyedy 52
           lw ++s++ SLq+LC++a+++c++ + +   dkLPLP  L+++L+++++
   Q: 136  LW-RPSKVLSLQDLCCRAVVSCTPVHLV---DKLPLPITLRSHLKSFSM 180
           67.99********************888...***************976 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

GIDYKTTTIL LDGRRVKLQL WDTSGQGRFC TIFRSYSRGA QGVILVYDIA NRWSFDGIDR 60
WIKEIDEHAP GVPKILVGNR LHLAFKRQVP TEQAQAYAER LGVTFFEVSP LCNFNITESF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCATTGACT ACAAGACGAC CACCATCCTG CTGGATGGGC GGCGGGTGAA ACTGCAGCTC 60
TGGTGAGTAT GGAGGAGGCT CGAGCGTCCC ACACTCCCAG GAGTAACCCC CCTGGTTGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR027417--P-loop_NTPase
IPR005225--Small_GTP-bd_dom
IPR001806--Small_GTPase
IPR001496--SOCS_box

PROSITE

PS50225--SOCS

Pfam

PF00071--Ras
PF07525--SOCS_box

SMART

SM00253--SOCS
SM00969--SOCS_box

Gene Ontology

GO:0005635--C:nuclear envelope
GO:0048471--C:perinuclear region of cytoplasm
GO:0005525--F:GTP binding
GO:1990967--P:multi-organism toxin transport
GO:0007264--P:small GTPase mediated signal transduction

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002205	Ailuropoda melanoleuca	94.79	2.00e-119	421.00
IUUC-Apl-003206	Anas platyrhynchos	92.31	5.00e-125	439.00
IUUC-Cfa-020527	Canis familiaris	95.50	7.00e-114	403.00
IUUC-Cho-024716	Choloepus hoffmanni	91.56	1.00e-82	298.00
IUUC-Eca-033492	Equus caballus	95.93	3.00e-128	450.00
IUUC-Fca-035705	Felis catus	95.48	2.00e-126	444.00
IUUC-Ggo-045495	Gorilla gorilla	97.74	3.00e-129	453.00
IUUC-Mpu-066352	Mustela putorius furo	94.57	3.00e-125	441.00
IUUC-Olo-080270	Oryza longistaminata	34.41	7.00e-12	65.10
IUUC-Oar-089702	Ovis aries	89.55	5.00e-117	413.00
IUUC-Ptr-090544	Pan troglodytes	85.81	1.00e-136	479.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence