iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Spo-108229

Ensembl Protein ID

SPCC895.09c.1:pep

UniProt Accession

O94536; UCP12_SCHPO

Genbank Protein ID

CAA22845.1

Protein Name

Putative ATP-dependent RNA helicase ucp12

Genbank Nucleotide ID

CU329672

Gene Name

ucp12; SPCC895.09c

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SPCC895.09c	SPCC895.09c.1	SPCC895.09c.1:pep

Annotation

mRNA Expression
GEO
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
UBD/Alpha-Helix/UBA	UBA	12672455

Organism

Schizosaccharomyces pombe

Functional Description
(View)

Probable ATP-binding RNA helicase.

Protein Sequence
(Fasta)

MGSKGKKGKS SEVNLETSKN KEKNIKGKKK NSLDPIEKNK QETAGLQTTS RPTAKQLVGG 60
SSWTGKIPVV LLNEHCQRSK WEKSDVKVRQ TKSKNYIFTS VVLAKKDPKN PSILDHVSLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGCAAGTGTT AGGGCCAACA GGAGGCAATT TAAGTCTGAA CCTAAGAGGT TGAATTAAGA 60
AAAATTAAAC AATAAGAAGC ATGTTTATAA GGATTCTTTG CTATTTACCA TAAAAGTGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0347--Helicase
KW-0378--Hydrolase
KW-0547--Nucleotide-binding
KW-1185--Reference proteome

Interpro

IPR011545--DEAD/DEAH_box_helicase_dom
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR011709--DUF1605
IPR007502--Helicase-assoc_dom
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR006575--RWD-domain
IPR009060--UBA-like
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS50908--RWD

Pfam

PF00270--DEAD
PF04408--HA2
PF00271--Helicase_C
PF07717--OB_NTP_bind
PF05773--RWD

SMART

SM00487--DEXDc
SM00847--HA2
SM00490--HELICc
SM00591--RWD

Gene Ontology

GO:0005829--C:cytosol
GO:0005739--C:mitochondrion
GO:0005524--F:ATP binding
GO:0004004--F:ATP-dependent RNA helicase activity
GO:0003676--F:nucleic acid binding
GO:0006396--P:RNA processing

KEGG

spo:SPCC895.09c

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001779	Ailuropoda melanoleuca	33.87	9.00e-111	392.00
IUUC-Apl-003596	Anas platyrhynchos	33.80	2.00e-120	425.00
IUUC-Ago-007773	Ashbya gossypii	31.57	6.00e-158	550.00
IUUC-Acl-008083	Aspergillus clavatus	36.78	0.00e+00	727.00
IUUC-Afl-008510	Aspergillus flavus	35.94	0.00e+00	715.00
IUUC-Afu-008922	Aspergillus fumigatus	35.71	0.00e+00	704.00
IUUC-Ani-009411	Aspergillus nidulans	40.00	1.00e-143	502.00
IUUC-Ang-009730	Aspergillus niger	35.72	0.00e+00	710.00
IUUC-Aor-010172	Aspergillus oryzae	36.45	0.00e+00	768.00
IUUC-Ate-010493	Aspergillus terreus	35.68	0.00e+00	687.00
IUUC-Ame-011169	Astyanax mexicanus	33.76	3.00e-122	431.00
IUUC-Bgr-011983	Blumeria graminis	35.22	0.00e+00	712.00
IUUC-Bta-013378	Bos taurus	33.29	3.00e-108	384.00
IUUC-Bci-013754	Botrytis cinerea	36.65	0.00e+00	733.00
IUUC-Bdi-014521	Brachypodium distachyon	24.44	3.20e-02	31.20
IUUC-Bol-016139	Brassica oleracea	34.22	3.00e-97	347.00
IUUC-Bra-016816	Brassica rapa	34.09	3.00e-96	344.00
IUUC-Cja-019540	Callithrix jacchus	33.42	9.00e-107	379.00
IUUC-Cfa-020791	Canis familiaris	33.75	2.00e-110	392.00
IUUC-Cpo-022285	Cavia porcellus	31.53	1.20e-01	32.00
IUUC-Csa-024273	Chlorocebus sabaeus	33.42	5.00e-107	380.00
IUUC-Cho-024970	Choloepus hoffmanni	30.76	7.00e-99	353.00
IUUC-Cin-025138	Ciona intestinalis	37.28	3.00e-97	347.00
IUUC-Cgl-026747	Colletotrichum gloeosporioides	35.65	0.00e+00	709.00
IUUC-Cne-026991	Cryptococcus neoformans	32.77	4.00e-136	477.00
IUUC-Dre-028088	Danio rerio	34.48	2.00e-128	452.00
IUUC-Dno-029278	Dasypus novemcinctus	33.06	4.00e-122	431.00
IUUC-Dor-030468	Dipodomys ordii	33.71	3.00e-102	364.00
IUUC-Dse-031349	Dothistroma septosporum	35.36	0.00e+00	726.00
IUUC-Dme-031899	Drosophila melanogaster	31.98	2.00e-95	341.00
IUUC-Eca-033631	Equus caballus	33.58	3.00e-109	387.00
IUUC-Eeu-035300	Erinaceus europaeus	34.04	6.00e-113	400.00
IUUC-Fca-036139	Felis catus	33.62	1.00e-110	392.00
IUUC-Fal-036635	Ficedula albicollis	33.64	1.00e-120	426.00
IUUC-Fox-037919	Fusarium oxysporum	36.71	0.00e+00	767.00
IUUC-Fso-038325	Fusarium solani	36.14	0.00e+00	766.00
IUUC-Gmo-038845	Gadus morhua	32.75	7.00e-109	387.00
IUUC-Ggr-039898	Gaeumannomyces graminis	36.59	4.00e-109	387.00
IUUC-Gga-040352	Gallus gallus	33.78	4.00e-106	377.00
IUUC-Hsa-045800	Homo sapiens	33.29	7.00e-108	383.00
IUUC-Hvu-047606	Hordeum vulgare	24.44	2.70e-02	31.20
IUUC-Itr-047998	Ictidomys tridecemlineatus	33.29	1.00e-107	382.00
IUUC-Kpa-049373	Komagataella pastoris	30.60	7.00e-151	526.00
IUUC-Lch-050113	Latimeria chalumnae	34.23	2.00e-107	381.00
IUUC-Lma-053050	Leptosphaeria maculans	36.25	0.00e+00	754.00
IUUC-Mcc-055887	Macaca mulatta	33.42	5.00e-107	380.00
IUUC-Mor-057213	Magnaporthe oryzae	34.96	0.00e+00	706.00
IUUC-Mga-059508	Meleagris gallopavo	33.41	2.00e-105	375.00
IUUC-Mvi-060345	Microbotryum violaceum	31.84	4.00e-117	414.00
IUUC-Mmr-061784	Microcebus murinus	33.50	3.00e-109	387.00
IUUC-Mdo-062130	Monodelphis domestica	33.76	2.00e-120	425.00
IUUC-Mmu-064388	Mus musculus	32.44	1.00e-117	416.00
IUUC-Mpu-066129	Mustela putorius furo	33.87	3.00e-111	394.00
IUUC-Mlu-068060	Myotis lucifugus	33.64	6.00e-122	430.00
IUUC-Nfi-068341	Neosartorya fischeri	35.32	0.00e+00	710.00
IUUC-Ncr-068804	Neurospora crassa	36.00	0.00e+00	721.00
IUUC-Nle-069904	Nomascus leucogenys	33.50	8.00e-109	386.00
IUUC-Oan-072940	Ornithorhynchus anatinus	33.46	2.00e-106	378.00
IUUC-Ocu-074808	Oryctolagus cuniculus	33.13	6.00e-108	383.00
IUUC-Ola-087195	Oryzias latipes	31.64	4.00e-107	380.00
IUUC-Olu-087596	Ostreococcus lucimarinus	33.14	2.00e-112	398.00
IUUC-Oga-088185	Otolemur garnettii	33.13	3.00e-107	380.00
IUUC-Oar-089378	Ovis aries	33.29	9.00e-109	386.00
IUUC-Ptr-091400	Pan troglodytes	32.92	6.00e-108	383.00
IUUC-Pan-092750	Papio anubis	33.42	2.00e-107	381.00
IUUC-Psi-093597	Pelodiscus sinensis	33.45	4.00e-122	431.00
IUUC-Pma-094246	Petromyzon marinus	37.50	3.20e-01	28.90
IUUC-Pno-094951	Phaeosphaeria nodorum	33.28	0.00e+00	685.00
IUUC-Pfo-097056	Poecilia formosa	31.94	1.00e-101	362.00
IUUC-Pab-098729	Pongo abelii	33.37	9.00e-120	423.00
IUUC-Pca-100135	Procavia capensis	35.71	3.30e-01	28.90
IUUC-Ppe-102067	Prunus persica	34.44	1.00e-107	382.00
IUUC-Pva-102886	Pteropus vampyrus	37.06	3.00e-95	341.00
IUUC-Pgr-103316	Puccinia graminis	29.30	2.00e-119	422.00
IUUC-Ptt-103877	Puccinia triticina	27.69	4.00e-105	374.00
IUUC-Pte-104049	Pyrenophora teres	35.43	0.00e+00	704.00
IUUC-Pyt-104735	Pyrenophora triticirepentis	35.25	0.00e+00	704.00
IUUC-Rno-106032	Rattus norvegicus	32.14	3.00e-118	418.00
IUUC-Sce-106450	Saccharomyces cerevisiae	29.75	3.00e-151	528.00
IUUC-Sha-106606	Sarcophilus harrisii	32.73	4.00e-112	397.00
IUUC-Sja-107784	Schizosaccharomyces japonicus	46.21	0.00e+00	1166.00
IUUC-Smo-109377	Selaginella moellendorffii	37.04	2.00e-107	381.00
IUUC-Sit-110666	Setaria italica	23.33	2.60e-02	31.60
IUUC-Sre-115121	Sporisorium reilianum	36.82	6.00e-121	427.00
IUUC-Tgu-117294	Taeniopygia guttata	33.05	1.00e-102	365.00
IUUC-Tru-118378	Takifugu rubripes	33.70	4.00e-123	433.00
IUUC-Tsy-119563	Tarsius syrichta	32.57	2.00e-108	385.00
IUUC-Tni-120568	Tetraodon nigroviridis	33.80	7.00e-104	369.00
IUUC-Tca-121301	Theobroma cacao	35.45	3.00e-106	377.00
IUUC-Tre-122120	Trichoderma reesei	35.68	0.00e+00	753.00
IUUC-Tvi-122632	Trichoderma virens	35.97	0.00e+00	735.00
IUUC-Tae-123659	Triticum aestivum	24.44	2.90e-02	31.20
IUUC-Tur-126194	Triticum urartu	24.44	2.20e-02	31.60
IUUC-Tme-127179	Tuber melanosporum	31.85	4.00e-177	613.00
IUUC-Tbe-127844	Tupaia belangeri	33.05	9.00e-101	359.00
IUUC-Ttr-128592	Tursiops truncatus	33.00	3.00e-108	384.00
IUUC-Uma-129440	Ustilago maydis	38.47	2.00e-120	426.00
IUUC-Vda-129765	Verticillium dahliae	35.57	0.00e+00	739.00
IUUC-Vpa-130460	Vicugna pacos	32.13	4.00e-109	387.00
IUUC-Vvi-131000	Vitis vinifera	34.72	2.00e-105	375.00
IUUC-Xtr-132421	Xenopus tropicalis	32.10	4.00e-99	354.00
IUUC-Xma-134305	Xiphophorus maculatus	31.78	3.00e-99	354.00
IUUC-Yli-134558	Yarrowia lipolytica	36.87	0.00e+00	740.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence