iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005910

UUCD1 version

UUC-ArL-01017

Ensembl Protein ID

Al_scaffold_0001_4743

UniProt Accession

D7KKD9; D7KKD9_ARALL

Genbank Protein ID

EFH67987.1

Protein Name

Predicted protein

Genbank Nucleotide ID

GL348713

Gene Name

SPA4; ARALYDRAFT_682420

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Al_scaffold_0001_4743	Al_scaffold_0001_4743	Al_scaffold_0001_4743

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.30e-26	90.9	567	604

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvll 36
           H+ +v+++++   d tll+sGsdDg++k+W++ +gv++
   Q: 567  HEKRVWSIDYssADpTLLASGSDDGSVKLWSINQGVSI 604
           9999*******9667****************9999875 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MKGSSESNSR GLNNTSGVSE FCTDGSKSLS HIDYVRSLLG SHKEDNLVGL DDDSIVRALE 60
CEDVSLRQWL DNPDRSVDAF ECFHVFRQIV EIVNAAHSQG IVVHNVRPSC FVMSSFNHVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGGGTT CTTCAGAATC TAATTCCAGA GGATTAAACA ACACATCTGG TGTTTCAGAG 60
TTTTGTACTG ATGGTTCTAA GTCTTTGTCT CACATTGATT ATGTCAGAAG CTTACTTGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011009--Kinase-like_dom
IPR000719--Prot_kinase_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50011--PROTEIN_KINASE_DOM
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00220--S_TKc
SM00320--WD40

Gene Ontology

GO:0005524--F:ATP binding
GO:0004672--F:protein kinase activity
GO:0009637--P:response to blue light

KEGG

aly:ARALYDRAFT_682420

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002923	Amborella trichopoda	63.08	0.00e+00	809.00
IUUC-Ath-006634	Arabidopsis thaliana	92.60	0.00e+00	1342.00
IUUC-Bdi-014444	Brachypodium distachyon	57.30	0.00e+00	751.00
IUUC-Bol-015644	Brassica oleracea	84.05	0.00e+00	1225.00
IUUC-Cho-024883	Choloepus hoffmanni	32.80	2.00e-41	163.00
IUUC-Hvu-047820	Hordeum vulgare	56.55	0.00e+00	783.00
IUUC-Lpe-051099	Leersia perrieri	58.26	0.00e+00	704.00
IUUC-Mac-064599	Musa acuminata	56.70	0.00e+00	721.00
IUUC-Oba-075434	Oryza barthii	56.32	0.00e+00	735.00
IUUC-Obr-076666	Oryza brachyantha	56.58	0.00e+00	778.00
IUUC-Ogl-077203	Oryza glaberrima	57.50	0.00e+00	779.00
IUUC-Ogu-078753	Oryza glumaepatula	54.06	0.00e+00	672.00
IUUC-Olo-080700	Oryza longistaminata	56.55	2.00e-165	575.00
IUUC-Oni-082327	Oryza nivara	56.98	0.00e+00	775.00
IUUC-Opu-083945	Oryza punctata	59.33	0.00e+00	707.00
IUUC-Oru-085079	Oryza rufipogon	56.84	0.00e+00	773.00
IUUC-Olu-087702	Ostreococcus lucimarinus	45.98	6.00e-77	280.00
IUUC-Smo-109020	Selaginella moellendorffii	53.49	0.00e+00	707.00
IUUC-Sit-110040	Setaria italica	55.88	0.00e+00	707.00
IUUC-Sbi-114141	Sorghum bicolor	56.71	0.00e+00	745.00
IUUC-Tae-125217	Triticum aestivum	56.42	0.00e+00	758.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence