iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-108999

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein COP1L1-1

Genbank Nucleotide ID

GL377568

Gene Name

COP1L1-1; SELMODRAFT_141846

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_141846	EFJ35654	EFJ35654

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.80e-30	102.8	354	388

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrtg 33
           H+ + ++++f  +d +llvsGsdDg++kvW++r+ 
   Q: 354  HAKRAWSVDFarTDpNLLVSGSDDGKLKVWSTRQE 388
           777889*****9889****************9876 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MCIMTHLNIK SNCPCCGAYL TSGQLYPNFL LNKILRKASV CQVASSASPG EHLRLALKQG 60
ADISMKDIDT LLSLLTEKKR KAEREEAETN LEVLHDFLQR SRQQKQQELN EIQTDLQWLK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGCTCGACA GGGATTTCCT GTGCCCGATA TGCATCCAGA CGATCAAAGA CGCGTTTTTG 60
ACGAGCTGCG GCCACAGCTT TTGCTATATG TGCATCATGA CGCATCTAAA CATCAAGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

smo:SELMODRAFT_141846

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cho-024883	Choloepus hoffmanni	32.46	2.00e-44	172.00
IUUC-Cme-027350	Cyanidioschyzon merolae	45.90	3.00e-95	342.00
IUUC-Dor-031110	Dipodomys ordii	39.30	5.00e-100	357.00
IUUC-Meu-056595	Macropus eugenii	34.69	2.00e-62	233.00
IUUC-Opr-070366	Ochotona princeps	32.99	7.00e-53	201.00
IUUC-Pca-100846	Procavia capensis	47.68	4.00e-107	381.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence