iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-115781

Ensembl Protein ID

ENSSSCP00000023454.1

UniProt Accession

I3LHA9; I3LHA9_PIG

Genbank Protein ID

ENSSSCP00000023454

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

FP325256

Gene Name

RNF19B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000025206.1	ENSSSCT00000027475.1	ENSSSCP00000023454.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RBR	2.70e-53	181.4	118	317

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RBR

   S: 1    CkvCllelsveeltvlleCehtfCkeClkqylelkikegqvteiscpaaecpekleeseikellveeelykryekllleevveadaalkw 90
           C++Cl++l++e+++ ll+C h+ C++Cl++yl+l+i+e++ + iscp  ec+e+l++++i+ ll+++ l+++ye+++l++++++d++++w
   Q: 118  CPLCLVRLPPERAPRLLSCPHRSCRDCLRHYLRLEISESR-VPISCP--ECSERLNPHDIRLLLADPPLMHKYEEFMLRRYLASDPDCRW 204
           ****************************************.9*****..89*************************************** PP
   S: 91   cpapdCslvvllekea..eklevecekcgkefCveCkeewHeglsCkelkeklakteeek......eeaeskelleanskkCpkCkvyie 172
           cpapdC ++v++  +a  +kl++e+e+c++efC++Ck++wH++++C+++++++a+t + +       ++ +++  ++++k+Cp+C++yi+
   Q: 205  CPAPDCGYAVIAYGCAscPKLTCEREGCQTEFCYHCKQIWHPNQTCDMARQQRAQTLRVRtkhtsgLSYGQESGPADDIKPCPRCSAYII 294
           *************999899************************************99988888888888899999*************** PP
   S: 173  k..negCnhmtCakCkaefCwlC 193
           k  +++CnhmtCa C++efCwlC
   Q: 295  KmnDGSCNHMTCAVCGCEFCWLC 317
           997889***************** PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MGSEKDSESP RSTSLHAAAP DPKCRSGGRR RRLTFHSVFS ASARGRRARA KPQAEPPPPA 60
APPPPVPVPA AAQAPPPEAL PAEPAAEAEA EAAVAAGPGL DDEEAAEGGG SGPEEVECPL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGTGCTGGT TGTGAGGTGT TTCCGCGAGG CGCCTGCGCA GTGGGCAACG GCTACGGGGC 60
GGAGGCTTTA TAACCACTTC GTCGTAACCG CTTGGCTTCT GTCTCGGGGA GGGCAGCTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR016150--Casein_kin_II_reg-sub_b-sht
IPR031127--E3_UB_ligase_RBR
IPR002867--IBR_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF01485--IBR

SMART

SM00647--IBR
SM00184--RING

Gene Ontology

GO:0044194--C:cytolytic granule
GO:0005829--C:cytosol
GO:0016021--C:integral component of membrane
GO:0000151--C:ubiquitin ligase complex
GO:0031624--F:ubiquitin conjugating enzyme binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0032436--P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

ssc:100621544

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002183	Ailuropoda melanoleuca	94.43	0.00e+00	1060.00
IUUC-Apl-003468	Anas platyrhynchos	89.90	0.00e+00	858.00
IUUC-Aca-004324	Anolis carolinensis	87.30	0.00e+00	961.00
IUUC-Ame-011813	Astyanax mexicanus	66.15	0.00e+00	689.00
IUUC-Bta-013135	Bos taurus	96.28	0.00e+00	1120.00
IUUC-Cja-019264	Callithrix jacchus	86.59	0.00e+00	974.00
IUUC-Cpo-022502	Cavia porcellus	94.70	0.00e+00	958.00
IUUC-Cho-025032	Choloepus hoffmanni	74.45	0.00e+00	730.00
IUUC-Dre-028769	Danio rerio	68.60	0.00e+00	745.00
IUUC-Dor-030551	Dipodomys ordii	96.98	3.00e-119	421.00
IUUC-Ete-033008	Echinops telfairi	81.96	0.00e+00	791.00
IUUC-Eca-033267	Equus caballus	95.98	0.00e+00	913.00
IUUC-Fca-035520	Felis catus	95.79	0.00e+00	913.00
IUUC-Fal-037090	Ficedula albicollis	89.07	0.00e+00	764.00
IUUC-Gga-041229	Gallus gallus	86.56	0.00e+00	736.00
IUUC-Gac-041619	Gasterosteus aculeatus	68.99	0.00e+00	730.00
IUUC-Hsa-045958	Homo sapiens	96.60	0.00e+00	1114.00
IUUC-Itr-048425	Ictidomys tridecemlineatus	94.67	0.00e+00	959.00
IUUC-Lch-049552	Latimeria chalumnae	81.54	0.00e+00	917.00
IUUC-Loc-051738	Lepisosteus oculatus	66.34	0.00e+00	778.00
IUUC-Laf-054252	Loxodonta africana	91.94	0.00e+00	925.00
IUUC-Meu-055920	Macropus eugenii	91.34	0.00e+00	945.00
IUUC-Mga-059587	Meleagris gallopavo	86.47	0.00e+00	789.00
IUUC-Mdo-061985	Monodelphis domestica	92.30	0.00e+00	1085.00
IUUC-Mmu-064262	Mus musculus	94.64	0.00e+00	1101.00
IUUC-Mpu-066101	Mustela putorius furo	95.72	0.00e+00	1104.00
IUUC-Mlu-067347	Myotis lucifugus	95.59	0.00e+00	914.00
IUUC-Ont-071298	Oreochromis niloticus	68.38	0.00e+00	749.00
IUUC-Oan-073219	Ornithorhynchus anatinus	88.05	0.00e+00	861.00
IUUC-Ocu-073792	Oryctolagus cuniculus	93.82	0.00e+00	883.00
IUUC-Ola-086499	Oryzias latipes	68.63	0.00e+00	758.00
IUUC-Oga-088812	Otolemur garnettii	96.43	0.00e+00	1060.00
IUUC-Oar-090353	Ovis aries	95.18	0.00e+00	984.00
IUUC-Psi-092988	Pelodiscus sinensis	89.33	0.00e+00	849.00
IUUC-Pfo-096268	Poecilia formosa	65.75	0.00e+00	757.00
IUUC-Pca-100597	Procavia capensis	95.39	0.00e+00	899.00
IUUC-Pva-102542	Pteropus vampyrus	84.15	0.00e+00	859.00
IUUC-Sha-106512	Sarcophilus harrisii	91.39	0.00e+00	1056.00
IUUC-Sar-113233	Sorex araneus	94.64	0.00e+00	880.00
IUUC-Tgu-117384	Taeniopygia guttata	95.45	0.00e+00	773.00
IUUC-Tru-117919	Takifugu rubripes	68.00	0.00e+00	736.00
IUUC-Tsy-119275	Tarsius syrichta	91.44	0.00e+00	897.00
IUUC-Tbe-127335	Tupaia belangeri	99.46	0.00e+00	669.00
IUUC-Ttr-128554	Tursiops truncatus	97.31	0.00e+00	924.00
IUUC-Vpa-130407	Vicugna pacos	89.86	0.00e+00	921.00
IUUC-Xtr-132325	Xenopus tropicalis	84.98	0.00e+00	724.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence