iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tru-117919

UUCD1 version

UUC-TaR-00061

Ensembl Protein ID

ENSTRUP00000002521.1

UniProt Accession

H2RQV5; H2RQV5_TAKRU

Protein Name

Uncharacterized protein

Gene Name

rnf19b

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000001077.1	ENSTRUT00000002532.1	ENSTRUP00000002520.1
ENSTRUG00000001077.1	ENSTRUT00000002533.1	ENSTRUP00000002521.1
ENSTRUG00000001077.1	ENSTRUT00000002534.1	ENSTRUP00000002522.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RBR	3.90e-47	161.3	8	205

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RBR

   S: 1    CkvCllelsveeltvlleCehtfCkeClkqylelkikegqvteiscpaaecpekleeseikellveeelykryekllleevveadaalkw 90
           C++Cl++++ e+l+ ll C+h+ C  Cl+qyl+++i e++ +++scp  ec e+l +++++ +l +  l ++ye++ll++++++d++++w
   Q: 8    CPLCLVRQPAEQLPELLGCSHRSCLCCLRQYLRIEITESR-VHLSCP--ECAERLAPQQVADILDDGALLEKYEEFLLRRCLASDPDCRW 94
           ****************************************.99****..89*************************************** PP
   S: 91   cpapdCslvvllekea..eklevecekcgkefCveCkeewHeglsCkelkeklakteeek....eeaeskelleanskkCpkCkvyiek. 173
           cpapdC ++v+++ +a  ++l +++e+cg efC++Ck++wH++++C+++++++a++ +++     ++++++  ++++k+Cp+C +yi+k 
   Q: 95   CPAPDCGFAVIASGCAscPRLVCHREGCGAEFCYHCKQAWHPNQTCDSARQQRAQSLHTHsnhsPSYTQEQGPTDDIKPCPRCGAYIIKm 184
           **************9988999******************************999998777666666778888899*************99 PP
   S: 174  .negCnhmtCakCkaefCwlC 193
            +++CnhmtCa C++efCwlC
   Q: 185  nDGSCNHMTCAVCGCEFCWLC 205
           7889***************** PP

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

GDSSLLECPL CLVRQPAEQL PELLGCSHRS CLCCLRQYLR IEITESRVHL SCPECAERLA 60
PQQVADILDD GALLEKYEEF LLRRCLASDP DCRWCPAPDC GFAVIASGCA SCPRLVCHRE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAATGGGAT CAGAAAGGGA CTCAGAGTCA CCTCACTCTT CAATCAGTGG CATCCCCAAC 60
CCTAACTGCC ACGTTGTGGG CAAACGTCAG GGCCGCATCT CCTTCTCCAG CCTGTTCCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR016150--Casein_kin_II_reg-sub_b-sht
IPR031127--E3_UB_ligase_RBR
IPR002867--IBR_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF01485--IBR

SMART

SM00647--IBR

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002183	Ailuropoda melanoleuca	65.26	0.00e+00	659.00
IUUC-Apl-003468	Anas platyrhynchos	68.72	2.00e-161	561.00
IUUC-Aca-004324	Anolis carolinensis	69.54	0.00e+00	701.00
IUUC-Ame-011813	Astyanax mexicanus	86.49	0.00e+00	860.00
IUUC-Bta-013135	Bos taurus	67.30	0.00e+00	708.00
IUUC-Bol-016316	Brassica oleracea	31.07	7.00e-16	78.60
IUUC-Cja-019264	Callithrix jacchus	64.98	0.00e+00	655.00
IUUC-Cpo-022502	Cavia porcellus	68.17	0.00e+00	628.00
IUUC-Cho-025032	Choloepus hoffmanni	57.55	8.00e-147	513.00
IUUC-Cin-025143	Ciona intestinalis	64.41	4.00e-39	154.00
IUUC-Dre-028769	Danio rerio	87.61	0.00e+00	933.00
IUUC-Ete-033008	Echinops telfairi	81.18	9.00e-121	427.00
IUUC-Gac-041619	Gasterosteus aculeatus	91.09	0.00e+00	949.00
IUUC-Hsa-045958	Homo sapiens	67.65	0.00e+00	710.00
IUUC-Itr-048425	Ictidomys tridecemlineatus	67.93	2.00e-177	615.00
IUUC-Lch-049552	Latimeria chalumnae	69.01	0.00e+00	728.00
IUUC-Loc-051738	Lepisosteus oculatus	78.46	0.00e+00	861.00
IUUC-Meu-055920	Macropus eugenii	69.46	0.00e+00	635.00
IUUC-Mdo-061985	Monodelphis domestica	68.72	0.00e+00	719.00
IUUC-Mmu-064262	Mus musculus	67.48	0.00e+00	710.00
IUUC-Mpu-066101	Mustela putorius furo	67.14	0.00e+00	704.00
IUUC-Ont-071298	Oreochromis niloticus	89.67	0.00e+00	992.00
IUUC-Oan-073219	Ornithorhynchus anatinus	67.28	2.00e-169	588.00
IUUC-Ola-086499	Oryzias latipes	93.15	0.00e+00	1007.00
IUUC-Oga-088812	Otolemur garnettii	68.13	0.00e+00	677.00
IUUC-Oar-090353	Ovis aries	67.70	1.00e-179	623.00
IUUC-Psi-092988	Pelodiscus sinensis	68.29	1.00e-160	559.00
IUUC-Pfo-096268	Poecilia formosa	90.49	0.00e+00	996.00
IUUC-Pca-100597	Procavia capensis	66.81	1.00e-165	576.00
IUUC-Pva-102542	Pteropus vampyrus	60.79	5.00e-163	567.00
IUUC-Sha-106512	Sarcophilus harrisii	68.30	0.00e+00	694.00
IUUC-Sar-113233	Sorex araneus	67.78	3.00e-158	551.00
IUUC-Ssc-115781	Sus scrofa	67.83	0.00e+00	738.00
IUUC-Tgu-117384	Taeniopygia guttata	74.88	8.00e-166	576.00
IUUC-Tbe-127335	Tupaia belangeri	74.32	1.00e-143	502.00
IUUC-Vpa-130407	Vicugna pacos	63.53	1.00e-166	579.00
IUUC-Xtr-132325	Xenopus tropicalis	73.09	1.00e-176	612.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence