iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ont-071230

Ensembl Protein ID

ENSONIP00000004167.1

UniProt Accession

I3J5M7; I3J5M7_ORENI

Genbank Protein ID

ENSONIP00000004167

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AERX01000466

Gene Name

WDR88

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSONIG00000003313.1	ENSONIT00000004168.1	ENSONIP00000004167.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-35	120.1	284	315
UBD/Beta-Prp	1.30e-46	159.5	191	330

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH+d+vt+++   d +l++s+s Dgt+++WD+
   Q: 284  GHSDWVTDVSVsADrKLVASSSKDGTVRLWDI 315
           8**********977799**************5 PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl....lrsl.sgheaevtavkfsp.dgkilvtgseDrtikvwdlstgkcv 87
           + ++h +v+++ +f+ ++ +l t+s+d+t+k+wd++ g +       l  ghe+ v+a+++   d+++lv++s Drt+ +wdls+ +++
   Q: 191  IDSNHGNVVSACCFTSNGHFLCTASWDKTLKLWDLQAGGFrshgGTPLqGGHEGSVSACCLAAaDADLLVSASYDRTVALWDLSSLCQT 279
           66788888888888888888888888888888888888887776444547788888888876415558888888888888888888888 PP
   S: 88   htlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdg 138
            +lkgh+d v+++s+s++++ ++s s+d t+r+wd+e+ +++ e+ +++++
   Q: 280  LVLKGHSDWVTDVSVSADRKLVASSSKDGTVRLWDIENMEEIPEVMKKRNA 330
           888888888888888888888888888888888888888888776665554 PP

Organism

Oreochromis niloticus

Protein Sequence
(Fasta)

PLKIIWGHKK DLHGTVPVKV LQAHRDAVTT ARVCCDNHCV LSCSSDCTAV LWDVESCQPL 60
RTFDGVHSKA ITECALIPHS NRMVTVSWDK KMVAWDLETG LTLWKSRQPG LLTSCSSSSD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCTTAAAAA TCATCTGGGG ACATAAGAAA GACCTTCACG GGACAGTAAG ACCCAGAAAC 60
CCCAACCTAA ATGGCTCTTT CACACTTCAG ACACCATGTT CGACACTGCG CTGATGCTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001328	Ailuropoda melanoleuca	46.28	1.00e-76	280.00
IUUC-Apl-003571	Anas platyrhynchos	46.56	1.00e-92	333.00
IUUC-Aca-005232	Anolis carolinensis	45.88	7.00e-66	243.00
IUUC-Ame-011833	Astyanax mexicanus	57.51	7.00e-57	213.00
IUUC-Bta-013562	Bos taurus	43.32	5.00e-83	301.00
IUUC-Cja-019202	Callithrix jacchus	44.74	6.00e-87	314.00
IUUC-Cfa-021095	Canis familiaris	44.78	1.00e-83	303.00
IUUC-Cpo-022170	Cavia porcellus	42.74	5.00e-79	288.00
IUUC-Csa-024218	Chlorocebus sabaeus	45.14	1.00e-87	317.00
IUUC-Cho-024561	Choloepus hoffmanni	46.04	9.00e-64	236.00
IUUC-Dno-029722	Dasypus novemcinctus	42.54	1.00e-77	283.00
IUUC-Dor-030464	Dipodomys ordii	43.71	5.00e-67	248.00
IUUC-Ete-032931	Echinops telfairi	44.44	2.00e-42	166.00
IUUC-Eca-034428	Equus caballus	43.66	6.00e-83	301.00
IUUC-Eeu-034568	Erinaceus europaeus	39.16	9.00e-60	223.00
IUUC-Fca-035707	Felis catus	40.49	1.00e-71	264.00
IUUC-Gmo-039646	Gadus morhua	59.49	6.00e-95	340.00
IUUC-Gga-040710	Gallus gallus	45.85	4.00e-87	315.00
IUUC-Ggo-044611	Gorilla gorilla	42.42	2.00e-48	186.00
IUUC-Hsa-046138	Homo sapiens	45.14	2.00e-86	313.00
IUUC-Itr-048283	Ictidomys tridecemlineatus	41.14	8.00e-70	257.00
IUUC-Lch-050329	Latimeria chalumnae	49.29	1.00e-94	339.00
IUUC-Loc-052876	Lepisosteus oculatus	41.45	2.00e-30	124.00
IUUC-Laf-053777	Loxodonta africana	43.48	1.00e-83	303.00
IUUC-Mcc-055771	Macaca mulatta	45.14	1.00e-87	317.00
IUUC-Meu-056584	Macropus eugenii	37.06	6.00e-52	197.00
IUUC-Mga-059818	Meleagris gallopavo	45.73	3.00e-90	325.00
IUUC-Mmr-060639	Microcebus murinus	42.90	9.00e-75	273.00
IUUC-Mdo-062321	Monodelphis domestica	44.32	1.00e-84	306.00
IUUC-Mpu-066849	Mustela putorius furo	44.51	4.00e-85	308.00
IUUC-Mlu-067238	Myotis lucifugus	39.13	5.00e-71	261.00
IUUC-Oan-072698	Ornithorhynchus anatinus	45.45	9.00e-87	313.00
IUUC-Ocu-074219	Oryctolagus cuniculus	42.64	2.00e-76	279.00
IUUC-Oga-087913	Otolemur garnettii	42.97	1.00e-81	296.00
IUUC-Oar-089977	Ovis aries	42.66	1.00e-81	297.00
IUUC-Ptr-090876	Pan troglodytes	44.86	9.00e-87	314.00
IUUC-Pan-091936	Papio anubis	48.07	1.00e-57	216.00
IUUC-Psi-093015	Pelodiscus sinensis	46.80	2.00e-58	218.00
IUUC-Pma-094552	Petromyzon marinus	38.07	2.00e-30	125.00
IUUC-Pfo-096240	Poecilia formosa	71.61	4.00e-127	449.00
IUUC-Pab-097983	Pongo abelii	40.81	4.00e-73	268.00
IUUC-Pca-100752	Procavia capensis	42.07	2.00e-64	240.00
IUUC-Pva-102199	Pteropus vampyrus	38.84	8.00e-72	264.00
IUUC-Rno-106062	Rattus norvegicus	40.33	1.00e-75	276.00
IUUC-Ssc-116089	Sus scrofa	40.49	1.00e-72	266.00
IUUC-Tbe-127860	Tupaia belangeri	36.68	3.00e-64	239.00
IUUC-Ttr-129152	Tursiops truncatus	41.13	2.00e-74	273.00
IUUC-Vpa-130745	Vicugna pacos	41.41	7.00e-75	274.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence