iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000017990.7	ENSRNOT00000024364.7	ENSRNOP00000024364.6
ENSRNOG00000017990.7	ENSRNOT00000089042.1	ENSRNOP00000070602.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
CPLM	dbPAF	PhosphositePlus
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	2.90e-07	30.8	50	89

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlve.MGFdreealqaLraannnleaAveyLldg 41
           +e+k+ ql++ +G +++e++ aL ++n+++++A++ Ll+g
   Q: 50   FEEKVKQLIDiTGKNQDECVIALHDCNGDVNRAINVLLEG 89
           79***********************************986 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MMTSVGTNRA RGNWEQPQNQ NQTQHKQRPQ ATAEQIRLAQ MISDHNDADF EEKVKQLIDI 60
TGKNQDECVI ALHDCNGDVN RAINVLLEGN PDTHSWEMVG KKKGVSGQKD GGQTESNEEG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGGGTGTCA GTGTGGAGGA GACTGAGGTA AAGTTGGCAG CGCAGCGGCG TTGGCGGCGG 60
CGGCGGCGGC AGCGGCAACG CGGCGGGGCC GGGTATTGTC CGCGGCCCCT TTAAATCCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR022166--DUF3697_Uba2
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50030--UBA

Pfam

PF12478--DUF3697

SMART

SM00165--UBA

Gene Ontology

GO:0005671--C:Ada2/Gcn5/Ada3 transcription activator complex
GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0031519--C:PcG protein complex
GO:0003723--F:RNA binding
GO:0007339--P:binding of sperm to zona pellucida
GO:0061484--P:hematopoietic stem cell homeostasis
GO:0010628--P:positive regulation of gene expression

KEGG

rno:361984

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002224	Ailuropoda melanoleuca	97.20	0.00e+00	1290.00
IUUC-Apl-003891	Anas platyrhynchos	83.70	0.00e+00	747.00
IUUC-Aca-004775	Anolis carolinensis	72.09	3.00e-121	428.00
IUUC-Ang-009672	Aspergillus niger	43.24	1.80e-02	33.10
IUUC-Ame-011168	Astyanax mexicanus	57.60	3.00e-149	523.00
IUUC-Bta-012828	Bos taurus	95.65	0.00e+00	1118.00
IUUC-Cja-019745	Callithrix jacchus	93.03	0.00e+00	1224.00
IUUC-Cfa-021052	Canis familiaris	93.47	0.00e+00	849.00
IUUC-Cpo-021884	Cavia porcellus	98.04	0.00e+00	1294.00
IUUC-Cho-024952	Choloepus hoffmanni	91.59	0.00e+00	998.00
IUUC-Cin-025284	Ciona intestinalis	41.05	2.00e-14	74.70
IUUC-Dre-027917	Danio rerio	59.97	2.00e-149	523.00
IUUC-Dno-028928	Dasypus novemcinctus	97.47	0.00e+00	1221.00
IUUC-Dor-031085	Dipodomys ordii	100.00	8.00e-113	401.00
IUUC-Eca-033794	Equus caballus	97.39	0.00e+00	1305.00
IUUC-Eeu-035149	Erinaceus europaeus	86.87	0.00e+00	1057.00
IUUC-Fca-036151	Felis catus	93.16	0.00e+00	823.00
IUUC-Fal-037010	Ficedula albicollis	85.75	0.00e+00	806.00
IUUC-Gmo-038568	Gadus morhua	62.26	5.00e-96	346.00
IUUC-Gga-040927	Gallus gallus	86.93	0.00e+00	814.00
IUUC-Gac-042377	Gasterosteus aculeatus	65.15	9.00e-109	388.00
IUUC-Ggo-045228	Gorilla gorilla	94.48	0.00e+00	860.00
IUUC-Hsa-046640	Homo sapiens	94.48	0.00e+00	860.00
IUUC-Itr-048492	Ictidomys tridecemlineatus	92.91	0.00e+00	860.00
IUUC-Lch-050547	Latimeria chalumnae	81.12	0.00e+00	752.00
IUUC-Loc-051792	Lepisosteus oculatus	75.00	1.00e-143	504.00
IUUC-Laf-054557	Loxodonta africana	96.49	0.00e+00	905.00
IUUC-Mcc-055019	Macaca mulatta	94.63	0.00e+00	860.00
IUUC-Meu-056728	Macropus eugenii	99.60	8.00e-113	402.00
IUUC-Mga-059865	Meleagris gallopavo	79.91	0.00e+00	716.00
IUUC-Mvi-060545	Microbotryum violaceum	36.84	1.40e+00	28.90
IUUC-Mmr-061272	Microcebus murinus	94.48	0.00e+00	864.00
IUUC-Mdo-062882	Monodelphis domestica	88.84	0.00e+00	802.00
IUUC-Mmu-064078	Mus musculus	99.44	0.00e+00	930.00
IUUC-Mpu-066636	Mustela putorius furo	92.25	0.00e+00	892.00
IUUC-Mlu-067554	Myotis lucifugus	95.14	0.00e+00	1241.00
IUUC-Nle-069820	Nomascus leucogenys	94.48	0.00e+00	859.00
IUUC-Opr-070427	Ochotona princeps	81.56	4.00e-167	582.00
IUUC-Ont-071731	Oreochromis niloticus	65.34	1.00e-133	471.00
IUUC-Ocu-073849	Oryctolagus cuniculus	90.28	0.00e+00	1179.00
IUUC-Ola-087073	Oryzias latipes	56.20	3.00e-135	476.00
IUUC-Oga-088352	Otolemur garnettii	90.44	0.00e+00	1097.00
IUUC-Oar-089189	Ovis aries	94.06	0.00e+00	899.00
IUUC-Ptr-090471	Pan troglodytes	94.63	0.00e+00	862.00
IUUC-Pan-091960	Papio anubis	93.39	0.00e+00	1219.00
IUUC-Psi-093123	Pelodiscus sinensis	80.50	0.00e+00	729.00
IUUC-Pfo-096779	Poecilia formosa	76.69	7.00e-88	319.00
IUUC-Pab-097725	Pongo abelii	94.20	0.00e+00	858.00
IUUC-Pca-100364	Procavia capensis	85.09	5.00e-158	551.00
IUUC-Pva-103206	Pteropus vampyrus	93.83	0.00e+00	820.00
IUUC-Sha-107007	Sarcophilus harrisii	93.79	0.00e+00	863.00
IUUC-Sar-113554	Sorex araneus	92.64	0.00e+00	1187.00
IUUC-Ssc-116394	Sus scrofa	94.06	0.00e+00	864.00
IUUC-Tgu-116920	Taeniopygia guttata	85.75	0.00e+00	814.00
IUUC-Tru-117891	Takifugu rubripes	58.16	2.00e-171	596.00
IUUC-Tsy-119473	Tarsius syrichta	90.52	0.00e+00	639.00
IUUC-Tni-120870	Tetraodon nigroviridis	50.07	5.00e-123	436.00
IUUC-Tbe-127249	Tupaia belangeri	84.80	1.00e-134	474.00
IUUC-Ttr-128196	Tursiops truncatus	85.53	0.00e+00	665.00
IUUC-Vpa-130530	Vicugna pacos	92.51	0.00e+00	827.00
IUUC-Xtr-132315	Xenopus tropicalis	70.57	0.00e+00	693.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence