iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pab-097885

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

E3 ubiquitin-protein ligase Arkadia

Genbank Nucleotide ID

ABGA01170936

Gene Name

RNF111

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPPYG00000006516.2	ENSPPYT00000007693.2	ENSPPYP00000007390.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.70e-07	30.7	932	973

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCl+ +++g  ++ lpC H+fh+ C+ +w        ++ +CP+Cr
   Q: 932  CTICLSILEEGedVRRLPCMHLFHQVCVDQW------LITNKKCPICR 973
           9*****9944444******************......**********8 PP

Organism

Pongo abelii

Protein Sequence
(Fasta)

MSQWTEYNEL YTKVDMKSEI PSDAPKTQES LKGILLHPEP IGAAKSFPAG VEMINSKVGN 60
EFSHLCDDSQ KQEKDMNGNQ QEQEKSLVVR KKRKSQQAGP SYVQNCVKEN QGILGLRQHL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTCAAT GGACTCTGAA TATAACGAGC TCTACACTTA AAAAGTGGAT ATGAAGAGTG 60
AGATTCCCTT CTGATGCACC AAAGACACAG GAGAGTCTGA AAGGGATCCT TTTGCATCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR029306--RNF111_N
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF15303--RNF111_N
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0043234--C:protein complex
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0007389--P:pattern specification process
GO:0031398--P:positive regulation of protein ubiquitination
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0030511--P:positive regulation of transforming growth factor beta receptor signaling pathway
GO:0000209--P:protein polyubiquitination
GO:0030579--P:ubiquitin-dependent SMAD protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001378	Ailuropoda melanoleuca	94.42	0.00e+00	1426.00
IUUC-Atr-002613	Amborella trichopoda	34.02	4.00e-15	76.30
IUUC-Apl-003634	Anas platyrhynchos	83.65	0.00e+00	1241.00
IUUC-Aca-004574	Anolis carolinensis	76.77	3.00e-128	451.00
IUUC-Aly-005415	Arabidopsis lyrata	33.65	5.00e-15	74.70
IUUC-Ath-007520	Arabidopsis thaliana	34.65	1.00e-13	70.10
IUUC-Acl-008067	Aspergillus clavatus	44.64	2.00e-10	61.20
IUUC-Ang-009544	Aspergillus niger	53.33	3.00e-10	60.80
IUUC-Ame-011948	Astyanax mexicanus	52.60	7.00e-47	181.00
IUUC-Bta-012823	Bos taurus	94.47	0.00e+00	1445.00
IUUC-Bol-016044	Brassica oleracea	33.65	1.00e-13	69.70
IUUC-Bra-017992	Brassica rapa	33.33	3.00e-14	72.80
IUUC-Cel-018118	Caenorhabditis elegans	39.29	1.00e-12	67.80
IUUC-Cja-018850	Callithrix jacchus	93.37	0.00e+00	1317.00
IUUC-Cfa-021062	Canis familiaris	96.65	0.00e+00	1464.00
IUUC-Cpo-021467	Cavia porcellus	88.23	0.00e+00	1320.00
IUUC-Csa-024048	Chlorocebus sabaeus	98.68	0.00e+00	1484.00
IUUC-Cho-024278	Choloepus hoffmanni	88.10	2.00e-140	493.00
IUUC-Cme-027312	Cyanidioschyzon merolae	58.33	5.00e-12	65.10
IUUC-Dre-028323	Danio rerio	51.21	5.00e-158	551.00
IUUC-Dno-028850	Dasypus novemcinctus	89.68	0.00e+00	1324.00
IUUC-Dor-030727	Dipodomys ordii	48.40	2.00e-43	169.00
IUUC-Dme-031973	Drosophila melanogaster	39.51	9.00e-26	112.00
IUUC-Ete-032985	Echinops telfairi	90.91	1.00e-116	414.00
IUUC-Eca-033659	Equus caballus	95.17	0.00e+00	1476.00
IUUC-Eeu-034773	Erinaceus europaeus	83.94	0.00e+00	752.00
IUUC-Fca-035560	Felis catus	96.75	0.00e+00	1419.00
IUUC-Fal-037598	Ficedula albicollis	82.41	0.00e+00	1258.00
IUUC-Gmo-038696	Gadus morhua	70.00	2.00e-64	240.00
IUUC-Gga-040900	Gallus gallus	84.63	0.00e+00	1267.00
IUUC-Gac-041830	Gasterosteus aculeatus	53.16	9.00e-170	590.00
IUUC-Gma-043396	Glycine max	45.57	6.00e-14	70.50
IUUC-Ggo-044921	Gorilla gorilla	97.61	0.00e+00	1537.00
IUUC-Hsa-046529	Homo sapiens	98.49	0.00e+00	1539.00
IUUC-Hvu-047680	Hordeum vulgare	33.33	1.00e-13	71.20
IUUC-Itr-048765	Ictidomys tridecemlineatus	95.98	0.00e+00	1408.00
IUUC-Lch-049512	Latimeria chalumnae	72.85	0.00e+00	1027.00
IUUC-Lpe-051474	Leersia perrieri	35.42	7.00e-13	68.90
IUUC-Loc-052174	Lepisosteus oculatus	57.20	0.00e+00	702.00
IUUC-Laf-053804	Loxodonta africana	92.35	0.00e+00	1297.00
IUUC-Mcc-055297	Macaca mulatta	98.58	0.00e+00	1516.00
IUUC-Meu-056052	Macropus eugenii	80.23	2.00e-113	403.00
IUUC-Mtr-058136	Medicago truncatula	55.32	4.00e-13	67.40
IUUC-Mga-059350	Meleagris gallopavo	83.85	0.00e+00	1256.00
IUUC-Mvi-060267	Microbotryum violaceum	28.03	5.00e-10	60.50
IUUC-Mmr-061666	Microcebus murinus	96.96	0.00e+00	1486.00
IUUC-Mdo-061958	Monodelphis domestica	88.46	0.00e+00	1326.00
IUUC-Mmu-063900	Mus musculus	87.73	0.00e+00	1293.00
IUUC-Mac-065281	Musa acuminata	33.91	1.00e-11	62.00
IUUC-Mpu-066492	Mustela putorius furo	96.45	0.00e+00	1466.00
IUUC-Mlu-067464	Myotis lucifugus	93.38	0.00e+00	1372.00
IUUC-Nfi-068528	Neosartorya fischeri	51.11	7.00e-10	59.70
IUUC-Nle-070038	Nomascus leucogenys	97.11	0.00e+00	1533.00
IUUC-Opr-070924	Ochotona princeps	81.19	0.00e+00	764.00
IUUC-Ont-072297	Oreochromis niloticus	52.73	1.00e-99	357.00
IUUC-Oan-072897	Ornithorhynchus anatinus	64.50	0.00e+00	855.00
IUUC-Ocu-074713	Oryctolagus cuniculus	93.82	0.00e+00	1428.00
IUUC-Oba-075898	Oryza barthii	37.50	3.00e-13	70.50
IUUC-Obr-076337	Oryza brachyantha	33.66	4.00e-13	69.70
IUUC-Ogl-077587	Oryza glaberrima	37.50	3.00e-13	70.50
IUUC-Ogu-078729	Oryza glumaepatula	37.50	3.00e-13	70.50
IUUC-Oin-079127	Oryza indica	37.50	3.00e-13	70.50
IUUC-Olo-080490	Oryza longistaminata	37.50	3.00e-13	70.50
IUUC-Ome-081451	Oryza meridionalis	37.50	3.00e-13	70.50
IUUC-Oni-082106	Oryza nivara	37.50	3.00e-13	70.50
IUUC-Opu-084108	Oryza punctata	37.50	3.00e-13	70.50
IUUC-Oru-085229	Oryza rufipogon	37.50	3.00e-13	70.50
IUUC-Osa-085404	Oryza sativa	37.50	3.00e-13	70.50
IUUC-Ola-087455	Oryzias latipes	52.57	4.00e-174	605.00
IUUC-Olu-087774	Ostreococcus lucimarinus	44.68	5.00e-11	59.30
IUUC-Oga-088809	Otolemur garnettii	95.09	0.00e+00	1484.00
IUUC-Oar-090286	Ovis aries	95.04	0.00e+00	1482.00
IUUC-Ptr-091451	Pan troglodytes	97.61	0.00e+00	1532.00
IUUC-Pan-092593	Papio anubis	97.59	0.00e+00	1468.00
IUUC-Psi-093662	Pelodiscus sinensis	84.26	0.00e+00	1227.00
IUUC-Pma-094624	Petromyzon marinus	57.53	8.00e-64	238.00
IUUC-Ppa-095313	Physcomitrella patens	34.02	6.00e-15	76.30
IUUC-Pfo-096611	Poecilia formosa	51.33	2.00e-176	613.00
IUUC-Pop-099945	Populus trichocarpa	38.14	5.00e-13	70.10
IUUC-Pca-100561	Procavia capensis	80.57	0.00e+00	731.00
IUUC-Ppe-101513	Prunus persica	38.14	9.00e-13	68.90
IUUC-Pva-102891	Pteropus vampyrus	94.78	0.00e+00	1509.00
IUUC-Rno-105327	Rattus norvegicus	88.83	0.00e+00	1328.00
IUUC-Sce-106307	Saccharomyces cerevisiae	45.83	3.00e-05	42.00
IUUC-Sha-107401	Sarcophilus harrisii	88.75	0.00e+00	1335.00
IUUC-Sit-110290	Setaria italica	40.62	2.00e-14	74.70
IUUC-Sly-111736	Solanum lycopersicum	40.62	6.00e-14	72.80
IUUC-Sar-113238	Sorex araneus	87.96	0.00e+00	870.00
IUUC-Sbi-114185	Sorghum bicolor	50.94	3.00e-14	71.20
IUUC-Ssc-116436	Sus scrofa	94.58	0.00e+00	1467.00
IUUC-Tgu-116470	Taeniopygia guttata	81.70	0.00e+00	1165.00
IUUC-Tru-118054	Takifugu rubripes	49.43	3.00e-159	555.00
IUUC-Tni-120063	Tetraodon nigroviridis	52.40	3.00e-180	625.00
IUUC-Tca-121420	Theobroma cacao	36.08	4.00e-13	70.10
IUUC-Tur-126415	Triticum urartu	53.70	3.00e-14	71.20
IUUC-Tbe-128026	Tupaia belangeri	89.32	0.00e+00	1237.00
IUUC-Ttr-128623	Tursiops truncatus	90.85	0.00e+00	1352.00
IUUC-Vpa-130662	Vicugna pacos	91.55	0.00e+00	1438.00
IUUC-Vvi-131609	Vitis vinifera	36.46	1.00e-12	68.60
IUUC-Xtr-132963	Xenopus tropicalis	72.27	0.00e+00	1068.00
IUUC-Xma-133967	Xiphophorus maculatus	48.09	5.00e-44	171.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence