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Tag Content
UUCD2 ID IUUC-Pop-099863
UUCD1 version UUC-PoT-00531
Ensembl Protein ID POPTR_0010s17630.1
UniProt Accession B9HY07; B9HY07_POPTR
Genbank Protein ID EEF01223.1
Protein Name Zinc finger family protein
Genbank Nucleotide ID CM000346
Gene Name POPTRDRAFT_724181; POPTR_0010s17630g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0010s17630 POPTR_0010s17630.1 POPTR_0010s17630.1
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/RING 35.21 3.00e-08 56.60 IUUC-Hsa-046429
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Populus trichocarpa
Protein Sequence
(Fasta)
MSDHVVLDVD QLIRPASTAP AEESDKAIVK EADVGPSCSR ANDGIDDGIS GEEEPLIQGA 60
ECRICQEEDS VSNLENPCAC SGSLKYAHRK CVQHWCNEKG DITCEICHQP YQPGYTAPPR 120
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Protein Fasta Sequence


>IUUC-Pop-099863|E3,RING|Populus trichocarpa
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Nucleotide Sequence
(Fasta)
ATTGGTCGGG AGTTGGTGAG CCATCCTAGA ACCCCTCCTC CATTAATTAA AAACCCCGGT 60
ATTCTCTCGT TGCTTAAATC CCAATAATCC AACCTTCTTC TTACTATAAT TATTTATTAT 120
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Nucleotide Fasta Sequence


>IUUC-Pop-099863|E3,RING|Populus trichocarpa
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Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR022143--DUF3675
IPR033275--MARCH-like
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS51292--ZF_RING_CH
Pfam

PF12428--DUF3675
PF12906--RINGv
SMART

SM00744--RINGv
Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding
KEGG pop:POPTR_0010s17630g
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000992 Aegilops tauschii 37.70 3.00e-22 98.20
IUUC-Aml-001957 Ailuropoda melanoleuca 35.21 7.00e-10 57.00
IUUC-Atr-002860 Amborella trichopoda 67.47 2.00e-91 328.00
IUUC-Apl-003523 Anas platyrhynchos 32.88 2.00e-09 55.10
IUUC-Aca-005012 Anolis carolinensis 35.21 4.00e-10 57.80
IUUC-Aly-005700 Arabidopsis lyrata 68.08 1.00e-52 199.00
IUUC-Ath-007473 Arabidopsis thaliana 69.66 1.00e-60 225.00
IUUC-Ame-010820 Astyanax mexicanus 27.71 6.00e-09 54.30
IUUC-Bta-012331 Bos taurus 36.23 8.00e-10 57.00
IUUC-Bdi-014827 Brachypodium distachyon 72.73 1.00e-76 279.00
IUUC-Bol-016602 Brassica oleracea 56.00 2.00e-71 261.00
IUUC-Bra-016861 Brassica rapa 55.80 7.00e-71 259.00
IUUC-Cja-019689 Callithrix jacchus 35.21 8.00e-10 56.60
IUUC-Cfa-020911 Canis familiaris 35.21 7.00e-10 57.00
IUUC-Cpo-022306 Cavia porcellus 35.21 8.00e-10 56.60
IUUC-Cre-022732 Chlamydomonas reinhardtii 60.00 2.00e-19 87.00
IUUC-Csa-024010 Chlorocebus sabaeus 35.21 7.00e-10 57.00
IUUC-Cho-024645 Choloepus hoffmanni 40.00 8.00e-10 56.20
IUUC-Dno-029999 Dasypus novemcinctus 35.21 7.00e-10 57.00
IUUC-Dor-030860 Dipodomys ordii 35.21 8.00e-10 56.60
IUUC-Ete-032571 Echinops telfairi 35.21 8.00e-10 57.00
IUUC-Eca-034097 Equus caballus 35.21 8.00e-10 56.60
IUUC-Eeu-034645 Erinaceus europaeus 36.23 2.00e-09 55.50
IUUC-Fca-036126 Felis catus 35.21 7.00e-10 57.00
IUUC-Fal-036875 Ficedula albicollis 31.65 1.00e-09 56.20
IUUC-Gmo-039433 Gadus morhua 39.22 4.00e-08 52.00
IUUC-Gga-041200 Gallus gallus 34.25 7.00e-10 57.00
IUUC-Gac-042285 Gasterosteus aculeatus 30.99 2.00e-08 52.80
IUUC-Gma-043460 Glycine max 40.57 1.00e-42 165.00
IUUC-Ggo-044825 Gorilla gorilla 35.21 8.00e-10 56.60
IUUC-Hsa-046429 Homo sapiens 35.21 8.00e-10 56.60
IUUC-Hvu-047133 Hordeum vulgare 62.37 1.00e-79 288.00
IUUC-Itr-048087 Ictidomys tridecemlineatus 35.21 8.00e-10 56.60
IUUC-Lch-049917 Latimeria chalumnae 35.21 7.00e-10 57.00
IUUC-Lpe-051036 Leersia perrieri 39.44 2.00e-21 95.10
IUUC-Loc-052242 Lepisosteus oculatus 43.14 8.00e-10 57.40
IUUC-Laf-054385 Loxodonta africana 35.21 8.00e-10 57.00
IUUC-Mcc-054854 Macaca mulatta 35.21 8.00e-10 56.60
IUUC-Mtr-057809 Medicago truncatula 40.16 3.00e-44 171.00
IUUC-Mga-059356 Meleagris gallopavo 28.57 2.00e-07 50.80
IUUC-Mmr-061764 Microcebus murinus 40.00 8.00e-10 56.20
IUUC-Mdo-062949 Monodelphis domestica 32.86 1.00e-08 53.90
IUUC-Mmu-063185 Mus musculus 35.21 8.00e-10 56.60
IUUC-Mac-064882 Musa acuminata 64.34 6.00e-84 303.00
IUUC-Mpu-066646 Mustela putorius furo 35.21 7.00e-10 57.00
IUUC-Mlu-067494 Myotis lucifugus 35.21 8.00e-10 56.60
IUUC-Nle-069945 Nomascus leucogenys 35.21 8.00e-10 56.60
IUUC-Opr-070431 Ochotona princeps 35.21 8.00e-10 56.60
IUUC-Ont-072653 Oreochromis niloticus 43.10 3.00e-08 53.50
IUUC-Ocu-074430 Oryctolagus cuniculus 35.21 8.00e-10 57.00
IUUC-Oba-075948 Oryza barthii 71.82 9.00e-71 259.00
IUUC-Obr-076491 Oryza brachyantha 60.07 2.00e-84 305.00
IUUC-Ogl-077439 Oryza glaberrima 71.82 9.00e-71 259.00
IUUC-Ogu-078523 Oryza glumaepatula 62.37 3.00e-81 294.00
IUUC-Oin-079184 Oryza indica 38.55 2.00e-27 114.00
IUUC-Olo-080950 Oryza longistaminata 55.60 1.00e-52 199.00
IUUC-Ome-081221 Oryza meridionalis 72.27 8.00e-72 263.00
IUUC-Oni-082096 Oryza nivara 71.36 1.00e-70 258.00
IUUC-Opu-083949 Oryza punctata 72.27 9.00e-72 262.00
IUUC-Oru-085237 Oryza rufipogon 71.82 9.00e-71 259.00
IUUC-Osa-085634 Oryza sativa 67.80 5.00e-75 273.00
IUUC-Oga-088072 Otolemur garnettii 35.21 8.00e-10 56.60
IUUC-Oar-089761 Ovis aries 36.23 8.00e-10 56.60
IUUC-Ptr-090839 Pan troglodytes 35.21 8.00e-10 56.60
IUUC-Pan-092795 Papio anubis 35.21 8.00e-10 56.60
IUUC-Psi-093674 Pelodiscus sinensis 35.21 7.00e-10 57.00
IUUC-Pma-094464 Petromyzon marinus 38.98 1.00e-09 55.50
IUUC-Pfo-097096 Poecilia formosa 34.57 3.00e-09 55.10
IUUC-Pab-098050 Pongo abelii 35.21 8.00e-10 56.60
IUUC-Pva-103060 Pteropus vampyrus 35.21 7.00e-10 57.00
IUUC-Rno-104870 Rattus norvegicus 35.21 8.00e-10 56.60
IUUC-Smo-109144 Selaginella moellendorffii 74.32 1.00e-61 228.00
IUUC-Sit-110468 Setaria italica 62.91 2.00e-66 244.00
IUUC-Sly-110996 Solanum lycopersicum 79.44 2.00e-78 284.00
IUUC-Stu-112782 Solanum tuberosum 79.44 5.00e-79 286.00
IUUC-Sar-113720 Sorex araneus 36.62 3.00e-10 58.20
IUUC-Sbi-114312 Sorghum bicolor 71.37 5.00e-73 266.00
IUUC-Ssc-116322 Sus scrofa 35.21 7.00e-10 57.00
IUUC-Tru-118083 Takifugu rubripes 31.71 2.00e-09 55.50
IUUC-Tsy-119057 Tarsius syrichta 35.21 8.00e-10 56.60
IUUC-Tca-121215 Theobroma cacao 77.43 2.00e-101 361.00
IUUC-Tae-124189 Triticum aestivum 63.44 2.00e-90 324.00
IUUC-Tbe-128101 Tupaia belangeri 35.21 7.00e-10 57.00
IUUC-Ttr-128776 Tursiops truncatus 35.21 8.00e-10 56.60
IUUC-Vpa-130196 Vicugna pacos 32.86 4.00e-09 54.30
IUUC-Vvi-131510 Vitis vinifera 72.08 1.00e-82 300.00
IUUC-Xtr-131915 Xenopus tropicalis 38.33 2.00e-09 55.80
IUUC-Xma-134160 Xiphophorus maculatus 34.62 6.00e-10 56.60
Created Date 25-Jun-2017

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