iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099940

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin-conjugating enzyme E2 13 family protein

Genbank Nucleotide ID

CM000346

Gene Name

POPTRDRAFT_227541; POPTR_0010s21380g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0010s21380	POPTR_0010s21380.1	POPTR_0010s21380.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	1.40e-50	171.8	10	157

Active Site

Position(s)	Description	Evidence
90	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 2    lkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilk..... 87
           l+k+l +l k+p++g+sa++ de++++ew+v+i+Gp+dt Yegg+F++ ++fp++YP++PP+v+f+++++hPnvy++GkvC+sil+     
   Q: 10   LQKQLRDLCKNPVDGFSAGLIDETNVFEWSVTIIGPPDTLYEGGFFNAIMSFPQNYPVSPPTVRFTSEVWHPNVYPDGKVCISILHppgdd 100
           7999*********************************************************************************999999 PP
   S: 88   ......eeekWspalsvesvllsiqsllaepnpesplneeaaellkknreeykkkvr 138
                  +e+Wsp+++ves++lsi+s+l++pn esp+n++aa+++++nr e+kkkv+
   Q: 101  pngyelATERWSPVHTVESIVLSIISMLSSPNDESPANVDAAKQWRENRDEFKKKVS 157
           999*999***********************************************996 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MAASQASLLL QKQLRDLCKN PVDGFSAGLI DETNVFEWSV TIIGPPDTLY EGGFFNAIMS 60
FPQNYPVSPP TVRFTSEVWH PNVYPDGKVC ISILHPPGDD PNGYELATER WSPVHTVESI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAAATAAATA ATTAAATAAC TAAAACCCAA TACCCACATT CCTAAACCAA ATAGATTTAC 60
ACTTCACTCC TCTAATTTTT CTATTTTTTT TCCCTCCCTT CTATTACGGC CTTTCTCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005524--F:ATP binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding
GO:0000209--P:protein polyubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0010s21380g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000411	Aegilops tauschii	65.00	2.00e-63	234.00
IUUC-Atr-003150	Amborella trichopoda	82.24	1.00e-63	234.00
IUUC-Aly-005673	Arabidopsis lyrata	87.80	4.00e-72	263.00
IUUC-Ath-007644	Arabidopsis thaliana	87.80	4.00e-72	263.00
IUUC-Ame-011698	Astyanax mexicanus	55.90	3.00e-54	203.00
IUUC-Bgr-012226	Blumeria graminis	53.70	4.00e-51	193.00
IUUC-Bci-013676	Botrytis cinerea	56.17	2.00e-53	200.00
IUUC-Bdi-014838	Brachypodium distachyon	85.98	3.00e-78	283.00
IUUC-Bra-017969	Brassica rapa	83.02	7.00e-74	268.00
IUUC-Cel-018162	Caenorhabditis elegans	66.46	5.00e-64	236.00
IUUC-Cre-022895	Chlamydomonas reinhardtii	77.84	9.00e-73	265.00
IUUC-Cin-025131	Ciona intestinalis	64.07	2.00e-62	230.00
IUUC-Cme-027321	Cyanidioschyzon merolae	64.02	5.00e-58	216.00
IUUC-Fox-037762	Fusarium oxysporum	55.97	2.00e-52	197.00
IUUC-Fso-038181	Fusarium solani	54.72	1.00e-51	194.00
IUUC-Ggr-039808	Gaeumannomyces graminis	55.21	2.00e-54	204.00
IUUC-Gma-044131	Glycine max	88.82	1.00e-67	248.00
IUUC-Hvu-047065	Hordeum vulgare	84.97	6.00e-72	263.00
IUUC-Itr-048349	Ictidomys tridecemlineatus	55.90	1.00e-52	198.00
IUUC-Lpe-051124	Leersia perrieri	85.14	2.00e-69	253.00
IUUC-Mor-057260	Magnaporthe oryzae	55.83	2.00e-54	204.00
IUUC-Mtr-058646	Medicago truncatula	88.16	1.00e-74	270.00
IUUC-Ncr-068623	Neurospora crassa	53.99	1.00e-50	191.00
IUUC-Nle-070007	Nomascus leucogenys	56.52	5.00e-53	199.00
IUUC-Oan-073475	Ornithorhynchus anatinus	59.46	1.00e-51	194.00
IUUC-Oba-075915	Oryza barthii	85.81	3.00e-77	280.00
IUUC-Obr-076863	Oryza brachyantha	85.14	6.00e-69	252.00
IUUC-Ogl-076981	Oryza glaberrima	85.81	3.00e-77	280.00
IUUC-Ogu-078183	Oryza glumaepatula	85.81	3.00e-77	280.00
IUUC-Oin-079755	Oryza indica	85.81	3.00e-77	280.00
IUUC-Olo-080576	Oryza longistaminata	85.81	3.00e-77	280.00
IUUC-Ome-081190	Oryza meridionalis	80.89	8.00e-75	271.00
IUUC-Oni-083010	Oryza nivara	85.81	3.00e-77	280.00
IUUC-Opu-083784	Oryza punctata	85.14	3.00e-69	253.00
IUUC-Oru-084817	Oryza rufipogon	85.81	3.00e-77	280.00
IUUC-Osa-085291	Oryza sativa	85.81	3.00e-77	280.00
IUUC-Pma-094602	Petromyzon marinus	61.03	3.00e-50	189.00
IUUC-Ppa-095611	Physcomitrella patens	80.12	4.00e-81	292.00
IUUC-Ppe-101778	Prunus persica	88.16	3.00e-74	269.00
IUUC-Ssl-108636	Sclerotinia sclerotiorum	54.94	2.00e-53	201.00
IUUC-Smo-109401	Selaginella moellendorffii	81.55	2.00e-68	250.00
IUUC-Sit-110784	Setaria italica	85.81	1.00e-69	254.00
IUUC-Sly-111843	Solanum lycopersicum	88.34	1.00e-79	287.00
IUUC-Stu-112654	Solanum tuberosum	91.10	2.00e-72	263.00
IUUC-Sbi-113787	Sorghum bicolor	84.62	5.00e-78	282.00
IUUC-Tre-122131	Trichoderma reesei	54.94	4.00e-52	196.00
IUUC-Tvi-122669	Trichoderma virens	55.56	1.00e-53	201.00
IUUC-Tae-125278	Triticum aestivum	85.62	4.00e-72	263.00
IUUC-Tur-126873	Triticum urartu	84.71	5.00e-72	263.00
IUUC-Vda-129914	Verticillium dahliae	56.17	5.00e-54	202.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence