iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aml-001513

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACTA01018545

Gene Name

POC1A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMEG00000009136.1	ENSAMET00000010032.1	ENSAMEP00000009616.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-59	195.8	148	186
UBD/Beta-Prp	2.20e-82	276.7	21	232

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           H ++v+c +f +d +l+vs+sdD+t+k+WD ++  +++s
   Q: 148  HINWVRCARFsPDgRLIVSASDDKTVKLWDKTSRECVHS 186
           999********999******************9999886 PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghed 95
           g h + +tcv+fs ++++la+gs+d+++ vw +++++   ++ gh+++vt+v+fsp+g +l++gs+D+t+++w ++      ++++h++
   Q: 21   G-HRDAVTCVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTA 108
           4.5557788****************************************************************6665555557899*** PP
   S: 96   svlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvy 184
           +v+s++f+ +g+++v++s+d+t++vw ++ ++ l   ls+h  +v+c++++pdg+l+vs+s+D+tv+lWd  + ++++   + h + v+
   Q: 109  TVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLF-SLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE-HGGFVT 195
           ***************************99999999.********************************************99.****** PP
   S: 185  slsfdsngkelvsgsldgtvklwdlqtgecvrtlngh 221
           s++f+++g++++++++d+tvk+wd++t + ++ ++ h
   Q: 196  SVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLH 232
           ****************************999998765 PP

Organism

Ailuropoda melanoleuca

Protein Sequence
(Fasta)

FTHLTLALPQ EDPSLERHFK GHRDAVTCVD FSLNTKQLAS GSMDSCLMVW HMKPQSRAYR 60
FAGHKDAVTC VNFSPSGHLL ASGSRDKTVR IWIPNVKGES TVFRAHTATV RSVHFCSDGQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCACACATT TGACCCTGGC TCTCCCGCAG GAGGACCCCT CGCTGGAGAG GCATTTTAAG 60
GGCCACCGAG ATGCAGTTAC CTGTGTGGAC TTCAGTCTCA ACACAAAGCA GCTGGGTGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005814--C:centriole
GO:0036064--C:ciliary basal body
GO:0000922--C:spindle pole
GO:0003431--P:growth plate cartilage chondrocyte development
GO:0007052--P:mitotic spindle organization
GO:1905515--P:non-motile cilium assembly
GO:0010825--P:positive regulation of centrosome duplication
GO:0007283--P:spermatogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003466	Anas platyrhynchos	78.75	0.00e+00	654.00
IUUC-Aca-004323	Anolis carolinensis	71.69	0.00e+00	629.00
IUUC-Bta-012484	Bos taurus	94.01	0.00e+00	787.00
IUUC-Cja-019067	Callithrix jacchus	92.27	0.00e+00	793.00
IUUC-Cfa-020439	Canis familiaris	96.76	0.00e+00	798.00
IUUC-Cpo-021403	Cavia porcellus	91.00	0.00e+00	787.00
IUUC-Cre-022724	Chlamydomonas reinhardtii	51.91	7.00e-115	407.00
IUUC-Csa-023479	Chlorocebus sabaeus	93.50	0.00e+00	694.00
IUUC-Cho-024354	Choloepus hoffmanni	87.73	2.00e-114	404.00
IUUC-Cin-025258	Ciona intestinalis	73.05	3.00e-143	501.00
IUUC-Csv-025955	Ciona savignyi	63.85	3.00e-145	508.00
IUUC-Dno-029467	Dasypus novemcinctus	79.44	3.00e-127	447.00
IUUC-Dor-030399	Dipodomys ordii	89.93	0.00e+00	760.00
IUUC-Dme-032182	Drosophila melanogaster	46.67	1.00e-80	293.00
IUUC-Eca-034425	Equus caballus	94.65	0.00e+00	774.00
IUUC-Eeu-034607	Erinaceus europaeus	81.33	0.00e+00	636.00
IUUC-Fca-035627	Felis catus	97.76	0.00e+00	781.00
IUUC-Fal-037381	Ficedula albicollis	75.37	0.00e+00	634.00
IUUC-Gmo-038489	Gadus morhua	67.34	2.00e-160	558.00
IUUC-Gga-040559	Gallus gallus	75.63	0.00e+00	627.00
IUUC-Gac-041453	Gasterosteus aculeatus	67.32	3.00e-168	584.00
IUUC-Ggo-044773	Gorilla gorilla	93.37	0.00e+00	756.00
IUUC-Hsa-045823	Homo sapiens	93.86	0.00e+00	761.00
IUUC-Itr-048560	Ictidomys tridecemlineatus	92.79	0.00e+00	789.00
IUUC-Lch-050558	Latimeria chalumnae	67.91	4.00e-175	607.00
IUUC-Loc-052836	Lepisosteus oculatus	67.90	4.00e-175	607.00
IUUC-Laf-053974	Loxodonta africana	83.62	0.00e+00	677.00
IUUC-Mcc-055494	Macaca mulatta	91.83	0.00e+00	761.00
IUUC-Meu-056646	Macropus eugenii	74.15	4.00e-127	447.00
IUUC-Mga-059295	Meleagris gallopavo	68.23	2.00e-175	608.00
IUUC-Mmr-061040	Microcebus murinus	93.77	0.00e+00	784.00
IUUC-Mdo-062519	Monodelphis domestica	77.57	2.00e-177	614.00
IUUC-Mmu-063759	Mus musculus	93.67	9.00e-172	596.00
IUUC-Mpu-066442	Mustela putorius furo	97.51	0.00e+00	786.00
IUUC-Mlu-068163	Myotis lucifugus	91.48	0.00e+00	776.00
IUUC-Nle-070160	Nomascus leucogenys	93.77	0.00e+00	758.00
IUUC-Opr-070192	Ochotona princeps	89.78	0.00e+00	668.00
IUUC-Ont-072539	Oreochromis niloticus	70.95	5.00e-148	517.00
IUUC-Oan-072834	Ornithorhynchus anatinus	60.93	1.00e-111	395.00
IUUC-Ocu-074624	Oryctolagus cuniculus	91.87	0.00e+00	711.00
IUUC-Ola-087268	Oryzias latipes	61.47	3.00e-158	551.00
IUUC-Oga-088964	Otolemur garnettii	86.55	0.00e+00	743.00
IUUC-Oar-090202	Ovis aries	94.40	0.00e+00	773.00
IUUC-Ptr-091164	Pan troglodytes	94.53	0.00e+00	762.00
IUUC-Pan-092805	Papio anubis	92.95	0.00e+00	690.00
IUUC-Psi-093359	Pelodiscus sinensis	84.84	3.00e-164	570.00
IUUC-Pma-094425	Petromyzon marinus	63.10	2.00e-166	578.00
IUUC-Ppa-095677	Physcomitrella patens	46.58	4.00e-82	298.00
IUUC-Pfo-096741	Poecilia formosa	58.55	2.00e-153	535.00
IUUC-Pab-098376	Pongo abelii	94.01	0.00e+00	795.00
IUUC-Pca-101122	Procavia capensis	88.70	0.00e+00	747.00
IUUC-Pva-103104	Pteropus vampyrus	73.07	1.00e-164	572.00
IUUC-Rno-105282	Rattus norvegicus	87.30	0.00e+00	666.00
IUUC-Sha-106840	Sarcophilus harrisii	82.13	2.00e-117	414.00
IUUC-Smo-109423	Selaginella moellendorffii	45.40	3.00e-79	288.00
IUUC-Sar-113262	Sorex araneus	64.84	4.00e-143	500.00
IUUC-Ssc-115392	Sus scrofa	93.53	0.00e+00	674.00
IUUC-Tgu-117340	Taeniopygia guttata	75.06	2.00e-178	618.00
IUUC-Tru-117577	Takifugu rubripes	71.52	1.00e-136	479.00
IUUC-Tsy-119404	Tarsius syrichta	85.54	0.00e+00	713.00
IUUC-Tni-120713	Tetraodon nigroviridis	68.97	2.00e-136	479.00
IUUC-Tbe-127788	Tupaia belangeri	73.39	8.00e-157	546.00
IUUC-Ttr-128608	Tursiops truncatus	88.78	0.00e+00	713.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence