iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000013490.1	ENSPSIT00000015560.1	ENSPSIP00000015487.1
ENSPSIG00000013490.1	ENSPSIT00000015577.1	ENSPSIP00000015504.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/CARD	5.70e-25	87.7	102	168

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/CARD

   S: 6    rlllstlqdrvrklLdvtdvldkylseflleeekelilaaaetkgnmqaaelLLktL..vqkegWfref 72
           r+ll++  +++rk +d  +++   +  +l+  e+++i + +e kg+m++a +L+++L  ++ke+W+++f
   Q: 102  RQLLKRIEATLRK-IDTDQIIP-LVYTCLIDRECQEIKQVKEHKGPMAGAVKLIECLcrSDKENWPKTF 168
           9******999986.899*****.9999*****************************************9 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

MTAEQKANLQ CYRQYIEKTL NPAYVVGNMK EWLPDDVSER IQIEQKGLTA AAQFFVDSLL 60
QLESEGWFRG FLDALHEAGY TGLREAIENW DFQKLENLEI HRQLLKRIEA TLRKIDTDQI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTAGCGGCC GTGCTATGCT TTGCTGCATC TGCTGCTGAC CTCCAGAGAT GATTTTCCTG 60
ATACTTGATT GGTCGCATCT TTGCGCCTTG CCTCTGCACA CCTCCTGGCC GGGCTCTGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome

Interpro

IPR031964--CARD_dom
IPR011029--DEATH-like_dom
IPR006935--Helicase/UvrB_N
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR021673--RLR_CTR

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS51789--RLR_CTR

Pfam

PF16739--CARD_2
PF00271--Helicase_C
PF04851--ResIII
PF11648--RIG-I_C-RD

SMART

SM00487--DEXDc
SM00490--HELICc

Gene Ontology

GO:0015629--C:actin cytoskeleton
GO:0005923--C:bicellular tight junction
GO:0005829--C:cytosol
GO:0032587--C:ruffle membrane
GO:0005524--F:ATP binding
GO:0003690--F:double-stranded DNA binding
GO:0003725--F:double-stranded RNA binding
GO:0016817--F:hydrolase activity, acting on acid anhydrides
GO:0003727--F:single-stranded RNA binding
GO:0008270--F:zinc ion binding
GO:0009597--P:detection of virus
GO:0045087--P:innate immune response
GO:0002230--P:positive regulation of defense response to virus by host
GO:0032725--P:positive regulation of granulocyte macrophage colony-stimulating factor production
GO:0032727--P:positive regulation of interferon-alpha production
GO:0032728--P:positive regulation of interferon-beta production
GO:0032755--P:positive regulation of interleukin-6 production
GO:0032757--P:positive regulation of interleukin-8 production
GO:0042993--P:positive regulation of transcription factor import into nucleus
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0030334--P:regulation of cell migration
GO:0043330--P:response to exogenous dsRNA
GO:0039529--P:RIG-I signaling pathway

KEGG

pss:102452744

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001898	Ailuropoda melanoleuca	54.98	0.00e+00	993.00
IUUC-Apl-003966	Anas platyrhynchos	63.04	0.00e+00	1118.00
IUUC-Aca-004499	Anolis carolinensis	52.09	0.00e+00	964.00
IUUC-Ate-010596	Aspergillus terreus	47.22	1.90e+00	27.70
IUUC-Ame-011950	Astyanax mexicanus	42.96	0.00e+00	736.00
IUUC-Bta-012489	Bos taurus	56.65	0.00e+00	1018.00
IUUC-Cel-018230	Caenorhabditis elegans	28.85	7.00e-62	232.00
IUUC-Cja-018716	Callithrix jacchus	57.00	0.00e+00	1021.00
IUUC-Cfa-020269	Canis familiaris	55.84	0.00e+00	1031.00
IUUC-Cpo-022507	Cavia porcellus	56.14	0.00e+00	996.00
IUUC-Csa-024209	Chlorocebus sabaeus	56.14	0.00e+00	1016.00
IUUC-Cho-025104	Choloepus hoffmanni	54.03	0.00e+00	829.00
IUUC-Cin-025792	Ciona intestinalis	32.44	2.00e-82	300.00
IUUC-Cgl-026385	Colletotrichum gloeosporioides	25.99	6.00e-31	130.00
IUUC-Dno-028954	Dasypus novemcinctus	55.02	0.00e+00	960.00
IUUC-Eca-034039	Equus caballus	55.96	0.00e+00	1012.00
IUUC-Eeu-035009	Erinaceus europaeus	54.43	0.00e+00	686.00
IUUC-Fca-036169	Felis catus	56.38	0.00e+00	1033.00
IUUC-Fal-037579	Ficedula albicollis	65.32	0.00e+00	1152.00
IUUC-Ggo-045318	Gorilla gorilla	56.16	0.00e+00	929.00
IUUC-Hsa-046671	Homo sapiens	56.47	0.00e+00	1000.00
IUUC-Itr-047996	Ictidomys tridecemlineatus	53.56	0.00e+00	962.00
IUUC-Lch-050461	Latimeria chalumnae	53.27	0.00e+00	958.00
IUUC-Loc-052582	Lepisosteus oculatus	51.39	0.00e+00	904.00
IUUC-Laf-054324	Loxodonta africana	56.36	0.00e+00	1001.00
IUUC-Mcc-055390	Macaca mulatta	55.71	0.00e+00	1007.00
IUUC-Meu-056365	Macropus eugenii	59.08	6.00e-115	408.00
IUUC-Mvi-060497	Microbotryum violaceum	23.37	2.00e-23	105.00
IUUC-Mmr-061407	Microcebus murinus	55.44	0.00e+00	1030.00
IUUC-Mmu-063939	Mus musculus	55.22	0.00e+00	998.00
IUUC-Mpu-066226	Mustela putorius furo	55.58	0.00e+00	947.00
IUUC-Mlu-068092	Myotis lucifugus	57.22	0.00e+00	1006.00
IUUC-Nfi-068405	Neosartorya fischeri	25.86	6.00e-27	116.00
IUUC-Opr-070246	Ochotona princeps	52.10	2.00e-145	509.00
IUUC-Oan-072742	Ornithorhynchus anatinus	58.55	0.00e+00	917.00
IUUC-Ocu-073959	Oryctolagus cuniculus	54.63	0.00e+00	979.00
IUUC-Oga-089173	Otolemur garnettii	55.45	0.00e+00	994.00
IUUC-Oar-089369	Ovis aries	56.65	0.00e+00	996.00
IUUC-Ptr-091032	Pan troglodytes	56.47	0.00e+00	1000.00
IUUC-Pan-092383	Papio anubis	56.08	0.00e+00	1012.00
IUUC-Pma-094367	Petromyzon marinus	39.39	3.00e-110	392.00
IUUC-Pab-098416	Pongo abelii	57.61	0.00e+00	957.00
IUUC-Pca-101006	Procavia capensis	60.51	1.00e-138	486.00
IUUC-Pva-102966	Pteropus vampyrus	56.48	0.00e+00	1022.00
IUUC-Rno-105059	Rattus norvegicus	54.61	2.00e-180	625.00
IUUC-Ssl-108450	Sclerotinia sclerotiorum	29.70	3.00e-03	38.90
IUUC-Sar-113202	Sorex araneus	52.02	0.00e+00	753.00
IUUC-Ssc-116120	Sus scrofa	54.94	0.00e+00	960.00
IUUC-Tgu-117314	Taeniopygia guttata	63.30	0.00e+00	1159.00
IUUC-Tsy-119453	Tarsius syrichta	58.54	3.00e-171	595.00
IUUC-Tre-122194	Trichoderma reesei	25.88	1.00e-23	105.00
IUUC-Ttr-128421	Tursiops truncatus	54.58	0.00e+00	805.00
IUUC-Vpa-130602	Vicugna pacos	54.94	0.00e+00	941.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence